RNA–Protein interactions for RNA: ENST00000407418.7

CBX6-202, Transcript of chromobox 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CBX6, Length 6,122 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6-202ENST00000407418 PCLOQ9Y6V0 5065 aa5.23□□□□□ -1.57
CBX6-202ENST00000407418 KRTAP4-7Q9BYR0 210 aa5.16□□□□□ -1.58
CBX6-202ENST00000407418 ABCA13Q86UQ4 5058 aa5.13□□□□□ -1.59
CBX6-202ENST00000407418 LCE2AQ5TA79 106 aaPredicted RBP5.1□□□□□ -1.59
CBX6-202ENST00000407418 KRTAP9-7A8MTY7 169 aa5.09□□□□□ -1.59
CBX6-202ENST00000407418 FLGP20930 4061 aaPredicted RBP5.05□□□□□ -1.6
CBX6-202ENST00000407418 LCE1BQ5T7P3 118 aa5.04□□□□□ -1.6
CBX6-202ENST00000407418 PRM1P04553 51 aa5.04□□□□□ -1.6
CBX6-202ENST00000407418 LCE1DQ5T752 114 aa5.03□□□□□ -1.6
CBX6-202ENST00000407418 KRTAP6-3Q3LI67 103 aa5□□□□□ -1.61
CBX6-202ENST00000407418 KRTAP2-3P0C7H8 128 aa4.97□□□□□ -1.61
CBX6-202ENST00000407418 KRTAP2-4Q9BYR9 128 aa4.97□□□□□ -1.61
CBX6-202ENST00000407418 LOC100996750A0A140TA64 210 aa4.94□□□□□ -1.62
CBX6-202ENST00000407418 KRTAP4-3Q9BYR4 195 aa4.91□□□□□ -1.62
CBX6-202ENST00000407418 MT1AP04731 61 aa4.88□□□□□ -1.63
CBX6-202ENST00000407418 LCE1AQ5T7P2 110 aa4.86□□□□□ -1.63
CBX6-202ENST00000407418 LCE5AQ5TCM9 118 aa4.84□□□□□ -1.63
CBX6-202ENST00000407418 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.83□□□□□ -1.64
CBX6-202ENST00000407418 LCE4AQ5TA78 99 aa4.79□□□□□ -1.64
CBX6-202ENST00000407418 FAT4Q6V0I7 4981 aa4.77□□□□□ -1.65
CBX6-202ENST00000407418 KRTAP2-2Q9BYT5 123 aa4.76□□□□□ -1.65
CBX6-202ENST00000407418 KRTAP2-1Q9BYU5 128 aa4.76□□□□□ -1.65
CBX6-202ENST00000407418 KRTAP19-7Q3SYF9 63 aa4.75□□□□□ -1.65
CBX6-202ENST00000407418 RNF213Q63HN8 5207 aa4.72□□□□□ -1.65
CBX6-202ENST00000407418 MUC2Q02817 5179 aa4.68□□□□□ -1.66
CBX6-202ENST00000407418 HMCN2Q8NDA2 5059 aa4.68□□□□□ -1.66
CBX6-202ENST00000407418 UBR4Q5T4S7 5183 aa4.67□□□□□ -1.66
CBX6-202ENST00000407418 KRTAP4-9Q9BYQ8 210 aa4.62□□□□□ -1.67
CBX6-202ENST00000407418 SYNE2Q8WXH0 6885 aaKnown RBP4.57□□□□□ -1.68
CBX6-202ENST00000407418 KRTAP9-4Q9BYQ2 154 aa4.54□□□□□ -1.68
CBX6-202ENST00000407418 FSIP2Q5CZC0 6907 aa4.52□□□□□ -1.69
CBX6-202ENST00000407418 KRTAP6-2Q3LI66 62 aa4.51□□□□□ -1.69
CBX6-202ENST00000407418 KRTAP6-1Q3LI64 71 aa4.46□□□□□ -1.7
CBX6-202ENST00000407418 LCE1CQ5T751 118 aa4.45□□□□□ -1.7
CBX6-202ENST00000407418 LCE1EQ5T753 118 aa4.45□□□□□ -1.7
CBX6-202ENST00000407418 LCE1FQ5T754 118 aa4.45□□□□□ -1.7
CBX6-202ENST00000407418 KRTAP9-9Q9BYP9 154 aa4.28□□□□□ -1.72
CBX6-202ENST00000407418 KRTAP9-6A8MVA2 160 aa4.15□□□□□ -1.75
CBX6-202ENST00000407418 KMT2DO14686 5537 aa4.04□□□□□ -1.76
CBX6-202ENST00000407418 KRTAP5-9P26371 169 aa4.03□□□□□ -1.76
CBX6-202ENST00000407418 USH2AO75445 5202 aa3.96□□□□□ -1.78
CBX6-202ENST00000407418 NEBP20929 6669 aa3.93□□□□□ -1.78
CBX6-202ENST00000407418 SYNE1Q8NF91 8797 aaKnown RBP3.88□□□□□ -1.79
CBX6-202ENST00000407418 OBSCNQ5VST9 7968 aa3.84□□□□□ -1.8
CBX6-202ENST00000407418 KRTAP20-2Q3LI61 65 aa3.83□□□□□ -1.8
CBX6-202ENST00000407418 KRTAP4-6Q9BYQ5 205 aa3.81□□□□□ -1.8
CBX6-202ENST00000407418 MACF1Q9UPN3 7388 aaKnown RBP3.8□□□□□ -1.8
CBX6-202ENST00000407418 SSPOA2VEC9 5147 aa3.74□□□□□ -1.81
CBX6-202ENST00000407418 FCGBPQ9Y6R7 5405 aaPredicted RBP3.73□□□□□ -1.81
CBX6-202ENST00000407418 KRTAP5-4Q6L8H1 288 aa3.68□□□□□ -1.82
CBX6-202ENST00000407418 KRTAP4-11Q9BYQ6 195 aa3.68□□□□□ -1.82
CBX6-202ENST00000407418 DSTQ03001 7570 aaKnown RBP3.67□□□□□ -1.82
CBX6-202ENST00000407418 MUC12Q9UKN1 5478 aa3.55□□□□□ -1.84
CBX6-202ENST00000407418 KRTAP4-12Q9BQ66 201 aa3.46□□□□□ -1.86
CBX6-202ENST00000407418 KRTAP4-2Q9BYR5 136 aa3.46□□□□□ -1.86
CBX6-202ENST00000407418 KRTAP4-4Q9BYR3 166 aa3.38□□□□□ -1.87
CBX6-202ENST00000407418 GPR98Q8WXG9 6306 aa3.31□□□□□ -1.88
CBX6-202ENST00000407418 KRTAP5-5Q701N2 237 aaPredicted RBP3.2□□□□□ -1.9
CBX6-202ENST00000407418 KRTAP5-3Q6L8H2 238 aa3.19□□□□□ -1.9
CBX6-202ENST00000407418 MDN1Q9NU22 5596 aa3.14□□□□□ -1.91
CBX6-202ENST00000407418 MUC5ACP98088 5654 aa2.89□□□□□ -1.95
CBX6-202ENST00000407418 KRTAP5-8O75690 187 aa2.89□□□□□ -1.95
CBX6-202ENST00000407418 PHGR1C9JFL3 82 aa2.81□□□□□ -1.96
CBX6-202ENST00000407418 MUC19Q7Z5P9 8384 aa2.8□□□□□ -1.96
CBX6-202ENST00000407418 AHNAK2Q8IVF2 5795 aa2.78□□□□□ -1.96
CBX6-202ENST00000407418 HMCN1Q96RW7 5635 aa2.64□□□□□ -1.99
CBX6-202ENST00000407418 KRTAP5-2Q701N4 177 aa2.64□□□□□ -1.99
CBX6-202ENST00000407418 KRTAP5-10Q6L8G5 202 aa2.49□□□□□ -2.01
CBX6-202ENST00000407418 MUC5BQ9HC84 5762 aaPredicted RBP2.47□□□□□ -2.01
CBX6-202ENST00000407418 KRTAP5-11Q6L8G4 156 aa2.45□□□□□ -2.02
CBX6-202ENST00000407418 KRTAP5-1Q6L8H4 278 aa2.3□□□□□ -2.04
CBX6-202ENST00000407418 KRTAP5-7Q6L8G8 165 aa2.24□□□□□ -2.05
CBX6-202ENST00000407418 AHNAKQ09666 5890 aaKnown RBP2.23□□□□□ -2.05
CBX6-202ENST00000407418 KRTAP21-2Q3LI59 83 aa2.16□□□□□ -2.06
CBX6-202ENST00000407418 KRTAP21-1Q3LI58 79 aa2.06□□□□□ -2.08
CBX6-202ENST00000407418 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.06□□□□□ -2.08
CBX6-202ENST00000407418 MUC16Q8WXI7 14507 aa1.53□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 63.2 ms