RNA–Protein interactions for RNA: ENST00000407343.3

PTPN12-202, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-202ENST00000407343 FAT1Q14517 4588 aa0.12□□□□□ -2.39
PTPN12-202ENST00000407343 LOC400499M0QZD8 3231 aa0.11□□□□□ -2.39
PTPN12-202ENST00000407343 LAMA5O15230 3695 aa0.11□□□□□ -2.39
PTPN12-202ENST00000407343 MT1HP80294 61 aa0.11□□□□□ -2.39
PTPN12-202ENST00000407343 KRTAP8-1Q8IUC2 63 aa0.11□□□□□ -2.39
PTPN12-202ENST00000407343 CDH23Q9H251 3354 aa0.11□□□□□ -2.39
PTPN12-202ENST00000407343 WDFY3Q8IZQ1 3526 aa0.11□□□□□ -2.39
PTPN12-202ENST00000407343 STARD9Q9P2P6 4700 aa0.11□□□□□ -2.39
PTPN12-202ENST00000407343 GCC2Q8IWJ2 1684 aa0.11□□□□□ -2.39
PTPN12-202ENST00000407343 DYNC2H1Q8NCM8 4307 aaKnown RBP0.11□□□□□ -2.39
PTPN12-202ENST00000407343 PRUNE2Q8WUY3 3088 aa0.1□□□□□ -2.39
PTPN12-202ENST00000407343 MGAQ8IWI9 3026 aa0.1□□□□□ -2.39
PTPN12-202ENST00000407343 MT1HL1P0DM35 61 aa0.1□□□□□ -2.39
PTPN12-202ENST00000407343 CD52P31358 61 aa0.1□□□□□ -2.39
PTPN12-202ENST00000407343 KRTAP20-2Q3LI61 65 aa0.1□□□□□ -2.39
PTPN12-202ENST00000407343 ADGRG4Q8IZF6 3080 aa0.1□□□□□ -2.39
PTPN12-202ENST00000407343 VPS13AQ96RL7 3174 aa0.1□□□□□ -2.39
PTPN12-202ENST00000407343 DNAH7Q8WXX0 4024 aa0.1□□□□□ -2.39
PTPN12-202ENST00000407343 DNAH8Q96JB1 4490 aa0.09□□□□□ -2.39
PTPN12-202ENST00000407343 VPS13DQ5THJ4 4388 aa0.09□□□□□ -2.39
PTPN12-202ENST00000407343 PLECQ15149 4684 aaKnown RBP0.09□□□□□ -2.4
PTPN12-202ENST00000407343 COX14Q96I36 57 aa0.09□□□□□ -2.4
PTPN12-202ENST00000407343 ITPR2Q14571 2701 aa0.08□□□□□ -2.4
PTPN12-202ENST00000407343 DNAH5Q8TE73 4624 aa0.08□□□□□ -2.4
PTPN12-202ENST00000407343 MT1BP07438 61 aa0.08□□□□□ -2.4
PTPN12-202ENST00000407343 RPS29P62273 56 aaKnown RBP0.08□□□□□ -2.4
PTPN12-202ENST00000407343 KRTAP19-5Q3LI72 72 aa0.08□□□□□ -2.4
PTPN12-202ENST00000407343 DNAH6Q9C0G6 4158 aa0.07□□□□□ -2.4
PTPN12-202ENST00000407343 LRBAP50851 2863 aa0.07□□□□□ -2.4
PTPN12-202ENST00000407343 DEFB108AA8MXU0 73 aa0.07□□□□□ -2.4
PTPN12-202ENST00000407343 MT1FP04733 61 aa0.07□□□□□ -2.4
PTPN12-202ENST00000407343 DEFB133Q30KQ1 61 aa0.07□□□□□ -2.4
PTPN12-202ENST00000407343 RPL39LQ96EH5 51 aaKnown RBP0.07□□□□□ -2.4
PTPN12-202ENST00000407343 TTTY10Q9BZA0 68 aa0.07□□□□□ -2.4
PTPN12-202ENST00000407343 TRRAPQ9Y4A5 3859 aa0.07□□□□□ -2.4
PTPN12-202ENST00000407343 CMYA5Q8N3K9 4069 aa0.07□□□□□ -2.4
PTPN12-202ENST00000407343 FRYLO94915 3013 aa0.06□□□□□ -2.4
PTPN12-202ENST00000407343 H3BSH0 61 aa0.06□□□□□ -2.4
PTPN12-202ENST00000407343 KRTAP6-1Q3LI64 71 aa0.06□□□□□ -2.4
PTPN12-202ENST00000407343 DNAH10Q8IVF4 4471 aa0.06□□□□□ -2.4
PTPN12-202ENST00000407343 ATMQ13315 3056 aa0.06□□□□□ -2.4
PTPN12-202ENST00000407343 NIPBLQ6KC79 2804 aaeCLIP0.05□□□□□ -2.4
PTPN12-202ENST00000407343 DMDP11532 3685 aa0.05□□□□□ -2.4
PTPN12-202ENST00000407343 DMXL2Q8TDJ6 3036 aa0.05□□□□□ -2.4
PTPN12-202ENST00000407343 MT2AP02795 61 aa0.05□□□□□ -2.4
PTPN12-202ENST00000407343 SPART-AS1P0CW21 52 aa0.05□□□□□ -2.4
PTPN12-202ENST00000407343 MT1GP13640 62 aa0.05□□□□□ -2.4
PTPN12-202ENST00000407343 SPRR2GQ9BYE4 73 aa0.05□□□□□ -2.4
PTPN12-202ENST00000407343 DEFB108BQ8NET1 73 aa0.04□□□□□ -2.4
PTPN12-202ENST00000407343 LEAP2Q969E1 77 aa0.04□□□□□ -2.4
PTPN12-202ENST00000407343 TOMM7Q9P0U1 55 aa0.04□□□□□ -2.4
PTPN12-202ENST00000407343 MUC17Q685J3 4493 aa0.03□□□□□ -2.4
PTPN12-202ENST00000407343 H3BUX3 64 aa0.03□□□□□ -2.4
PTPN12-202ENST00000407343 MT1MQ8N339 61 aa0.03□□□□□ -2.4
PTPN12-202ENST00000407343 HTN3P15516 51 aa0.02□□□□□ -2.41
PTPN12-202ENST00000407343 KRTAP19-2Q3LHN2 52 aa0.02□□□□□ -2.41
PTPN12-202ENST00000407343 KRTAP19-8Q3LI54 63 aa0.02□□□□□ -2.41
PTPN12-202ENST00000407343 DEFB136Q30KP8 78 aa0.01□□□□□ -2.41
PTPN12-202ENST00000407343 DNAH17Q9UFH2 4485 aa0.01□□□□□ -2.41
PTPN12-202ENST00000407343 CENPEQ02224 2701 aa0□□□□□ -2.41
PTPN12-202ENST00000407343 MT1EP04732 61 aa0□□□□□ -2.41
PTPN12-202ENST00000407343 KRTAP19-7Q3SYF9 63 aa0□□□□□ -2.41
PTPN12-202ENST00000407343 LINC01556Q5JQF7 62 aa0□□□□□ -2.41
PTPN12-202ENST00000407343 DEFB4AO15263 64 aa-0.01□□□□□ -2.41
PTPN12-202ENST00000407343 DEFB1P60022 68 aa-0.01□□□□□ -2.41
PTPN12-202ENST00000407343 RHPN1-AS1Q9BWJ2 59 aa-0.01□□□□□ -2.41
PTPN12-202ENST00000407343 HTN1P15515 57 aa-0.02□□□□□ -2.41
PTPN12-202ENST00000407343 MT1XP80297 61 aa-0.02□□□□□ -2.41
PTPN12-202ENST00000407343 MT1LQ93083 61 aa-0.02□□□□□ -2.41
PTPN12-202ENST00000407343 A0A096LPF7 62 aa-0.03□□□□□ -2.41
PTPN12-202ENST00000407343 PRCDQ00LT1 54 aa-0.03□□□□□ -2.41
PTPN12-202ENST00000407343 ARHGAP5-AS1Q96IT6 56 aa-0.03□□□□□ -2.41
PTPN12-202ENST00000407343 APELAP0DMC3 54 aa-0.04□□□□□ -2.42
PTPN12-202ENST00000407343 TMEM167AQ8TBQ9 72 aa-0.04□□□□□ -2.42
PTPN12-202ENST00000407343 LINC01590Q5TEZ4 76 aa-0.05□□□□□ -2.42
PTPN12-202ENST00000407343 A0A096LNI7 61 aa-0.06□□□□□ -2.42
PTPN12-202ENST00000407343 K7EIM0 57 aa-0.13□□□□□ -2.43
PTPN12-202ENST00000407343 RPL39P5Q59GN2 51 aa-0.16□□□□□ -2.44
Retrieved 78 of 20,778 RNA–protein pairs in 58.1 ms