RNA–Protein interactions for RNA: ENST00000406524.6

CCDC178-205, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC178, Length 3,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-205ENST00000406524 PRM1P04553 51 aa1.2□□□□□ -2.22
CCDC178-205ENST00000406524 SMR3AQ99954 134 aa1.19□□□□□ -2.22
CCDC178-205ENST00000406524 STARD9Q9P2P6 4700 aa1.19□□□□□ -2.22
CCDC178-205ENST00000406524 LCE1CQ5T751 118 aa1.19□□□□□ -2.22
CCDC178-205ENST00000406524 LCE1BQ5T7P3 118 aa1.19□□□□□ -2.22
CCDC178-205ENST00000406524 FLGP20930 4061 aaPredicted RBP1.19□□□□□ -2.22
CCDC178-205ENST00000406524 DNHD1Q96M86 4753 aa1.18□□□□□ -2.22
CCDC178-205ENST00000406524 LRP1BQ9NZR2 4599 aa1.17□□□□□ -2.22
CCDC178-205ENST00000406524 KRTAP8-1Q8IUC2 63 aa1.16□□□□□ -2.22
CCDC178-205ENST00000406524 LRP1Q07954 4544 aaKnown RBP1.13□□□□□ -2.23
CCDC178-205ENST00000406524 LPAP08519 4548 aa1.12□□□□□ -2.23
CCDC178-205ENST00000406524 SMR3BP02814 79 aaPredicted RBP1.11□□□□□ -2.23
CCDC178-205ENST00000406524 RYR2Q92736 4967 aa1.09□□□□□ -2.23
CCDC178-205ENST00000406524 CRCT1Q9UGL9 99 aa1.07□□□□□ -2.24
CCDC178-205ENST00000406524 BIRC6Q9NR09 4857 aa1.07□□□□□ -2.24
CCDC178-205ENST00000406524 RYR3Q15413 4870 aa1.07□□□□□ -2.24
CCDC178-205ENST00000406524 MACF1Q9UPN3 7388 aaKnown RBP1.06□□□□□ -2.24
CCDC178-205ENST00000406524 RYR1P21817 5038 aa1.06□□□□□ -2.24
CCDC178-205ENST00000406524 HYDINQ4G0P3 5121 aa1.06□□□□□ -2.24
CCDC178-205ENST00000406524 HERC1Q15751 4861 aa1.05□□□□□ -2.24
CCDC178-205ENST00000406524 HERC2O95714 4834 aa1.04□□□□□ -2.24
CCDC178-205ENST00000406524 LRP2P98164 4655 aa1.02□□□□□ -2.25
CCDC178-205ENST00000406524 PCLOQ9Y6V0 5065 aa1□□□□□ -2.25
CCDC178-205ENST00000406524 KRTAP19-2Q3LHN2 52 aa1□□□□□ -2.25
CCDC178-205ENST00000406524 KRTAP19-5Q3LI72 72 aa1□□□□□ -2.25
CCDC178-205ENST00000406524 KMT2CQ8NEZ4 4911 aaKnown RBP0.99□□□□□ -2.25
CCDC178-205ENST00000406524 MT1HL1P0DM35 61 aa0.99□□□□□ -2.25
CCDC178-205ENST00000406524 MUC2Q02817 5179 aa0.99□□□□□ -2.25
CCDC178-205ENST00000406524 KRTAP6-2Q3LI66 62 aa0.97□□□□□ -2.25
CCDC178-205ENST00000406524 NEBP20929 6669 aa0.96□□□□□ -2.26
CCDC178-205ENST00000406524 KRTAP19-3Q7Z4W3 81 aa0.95□□□□□ -2.26
CCDC178-205ENST00000406524 SPRR2GQ9BYE4 73 aa0.94□□□□□ -2.26
CCDC178-205ENST00000406524 EPPK1P58107 5090 aaKnown RBP0.94□□□□□ -2.26
CCDC178-205ENST00000406524 KRTAP19-8Q3LI54 63 aa0.92□□□□□ -2.26
CCDC178-205ENST00000406524 HMCN2Q8NDA2 5059 aa0.91□□□□□ -2.26
CCDC178-205ENST00000406524 ABCA13Q86UQ4 5058 aa0.91□□□□□ -2.26
CCDC178-205ENST00000406524 KIAA1109Q2LD37 5005 aa0.89□□□□□ -2.27
CCDC178-205ENST00000406524 MT1AP04731 61 aa0.86□□□□□ -2.27
CCDC178-205ENST00000406524 SPRR2DP22532 72 aa0.85□□□□□ -2.27
CCDC178-205ENST00000406524 KRTAP4-1Q9BYQ7 146 aa0.83□□□□□ -2.28
CCDC178-205ENST00000406524 FAT4Q6V0I7 4981 aa0.83□□□□□ -2.28
CCDC178-205ENST00000406524 MT1XP80297 61 aa0.83□□□□□ -2.28
CCDC178-205ENST00000406524 UBR4Q5T4S7 5183 aa0.83□□□□□ -2.28
CCDC178-205ENST00000406524 USH2AO75445 5202 aa0.82□□□□□ -2.28
CCDC178-205ENST00000406524 DSTQ03001 7570 aaKnown RBP0.82□□□□□ -2.28
CCDC178-205ENST00000406524 KMT2DO14686 5537 aa0.82□□□□□ -2.28
CCDC178-205ENST00000406524 MT1HP80294 61 aa0.81□□□□□ -2.28
CCDC178-205ENST00000406524 MT1GP13640 62 aa0.81□□□□□ -2.28
CCDC178-205ENST00000406524 RNF213Q63HN8 5207 aa0.8□□□□□ -2.28
CCDC178-205ENST00000406524 SYNE2Q8WXH0 6885 aaKnown RBP0.8□□□□□ -2.28
CCDC178-205ENST00000406524 MT1EP04732 61 aa0.8□□□□□ -2.28
CCDC178-205ENST00000406524 SPRR2FQ96RM1 72 aa0.8□□□□□ -2.28
CCDC178-205ENST00000406524 MT2AP02795 61 aa0.79□□□□□ -2.28
CCDC178-205ENST00000406524 MT1BP07438 61 aa0.79□□□□□ -2.28
CCDC178-205ENST00000406524 KRTAP5-7Q6L8G8 165 aa0.78□□□□□ -2.28
CCDC178-205ENST00000406524 KRTAP21-2Q3LI59 83 aa0.77□□□□□ -2.29
CCDC178-205ENST00000406524 SSPOA2VEC9 5147 aa0.77□□□□□ -2.29
CCDC178-205ENST00000406524 MT1FP04733 61 aa0.76□□□□□ -2.29
CCDC178-205ENST00000406524 SPRR2BP35325 72 aa0.76□□□□□ -2.29
CCDC178-205ENST00000406524 FCGBPQ9Y6R7 5405 aaPredicted RBP0.76□□□□□ -2.29
CCDC178-205ENST00000406524 SPRR2AP35326 72 aa0.76□□□□□ -2.29
CCDC178-205ENST00000406524 KRTAP19-6Q3LI70 58 aa0.76□□□□□ -2.29
CCDC178-205ENST00000406524 KRTAP21-1Q3LI58 79 aa0.75□□□□□ -2.29
CCDC178-205ENST00000406524 MT1LQ93083 61 aa0.75□□□□□ -2.29
CCDC178-205ENST00000406524 SPRR2EP22531 72 aa0.75□□□□□ -2.29
CCDC178-205ENST00000406524 KRTAP5-10Q6L8G5 202 aa0.75□□□□□ -2.29
CCDC178-205ENST00000406524 KRTAP19-7Q3SYF9 63 aa0.73□□□□□ -2.29
CCDC178-205ENST00000406524 MDN1Q9NU22 5596 aa0.71□□□□□ -2.3
CCDC178-205ENST00000406524 MT1MQ8N339 61 aa0.69□□□□□ -2.3
CCDC178-205ENST00000406524 KRTAP6-1Q3LI64 71 aa0.67□□□□□ -2.3
CCDC178-205ENST00000406524 MUC16Q8WXI7 14507 aa0.66□□□□□ -2.3
CCDC178-205ENST00000406524 KRTAP20-1Q3LI63 56 aa0.64□□□□□ -2.31
CCDC178-205ENST00000406524 MUC12Q9UKN1 5478 aa0.61□□□□□ -2.31
CCDC178-205ENST00000406524 FSIP2Q5CZC0 6907 aa0.59□□□□□ -2.32
CCDC178-205ENST00000406524 KRTAP20-2Q3LI61 65 aa0.47□□□□□ -2.33
CCDC178-205ENST00000406524 MT4P47944 62 aa0.4□□□□□ -2.35
CCDC178-205ENST00000406524 PHGR1C9JFL3 82 aa0.36□□□□□ -2.35
Retrieved 77 of 20,778 RNA–protein pairs in 5.9 ms