RNA–Protein interactions for RNA: ENST00000406451.8

HDAC9-204, Transcript of histone deacetylase 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HDAC9, Length 9,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-204ENST00000406451 LPAP08519 4548 aa1.66□□□□□ -2.14
HDAC9-204ENST00000406451 MT1LQ93083 61 aa1.65□□□□□ -2.14
HDAC9-204ENST00000406451 MT1EP04732 61 aa1.65□□□□□ -2.15
HDAC9-204ENST00000406451 LCE2AQ5TA79 106 aaPredicted RBP1.65□□□□□ -2.15
HDAC9-204ENST00000406451 MT4P47944 62 aa1.61□□□□□ -2.15
HDAC9-204ENST00000406451 MT1MQ8N339 61 aa1.61□□□□□ -2.15
HDAC9-204ENST00000406451 LCE3DQ9BYE3 92 aa1.6□□□□□ -2.15
HDAC9-204ENST00000406451 SYNE1Q8NF91 8797 aaKnown RBP1.6□□□□□ -2.15
HDAC9-204ENST00000406451 KRTAP4-7Q9BYR0 210 aa1.59□□□□□ -2.15
HDAC9-204ENST00000406451 SSPOA2VEC9 5147 aa1.57□□□□□ -2.16
HDAC9-204ENST00000406451 KRTAP20-1Q3LI63 56 aa1.57□□□□□ -2.16
HDAC9-204ENST00000406451 KRTAP9-7A8MTY7 169 aa1.57□□□□□ -2.16
HDAC9-204ENST00000406451 LCE3EQ5T5B0 92 aa1.56□□□□□ -2.16
HDAC9-204ENST00000406451 MUC2Q02817 5179 aa1.55□□□□□ -2.16
HDAC9-204ENST00000406451 KRTAP6-3Q3LI67 103 aa1.53□□□□□ -2.17
HDAC9-204ENST00000406451 KRTAP2-3P0C7H8 128 aa1.52□□□□□ -2.17
HDAC9-204ENST00000406451 KRTAP2-4Q9BYR9 128 aa1.52□□□□□ -2.17
HDAC9-204ENST00000406451 KRTAP2-1Q9BYU5 128 aa1.52□□□□□ -2.17
HDAC9-204ENST00000406451 KRTAP4-3Q9BYR4 195 aa1.52□□□□□ -2.17
HDAC9-204ENST00000406451 LOC100996750A0A140TA64 210 aa1.52□□□□□ -2.17
HDAC9-204ENST00000406451 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.51□□□□□ -2.17
HDAC9-204ENST00000406451 KRTAP19-7Q3SYF9 63 aa1.51□□□□□ -2.17
HDAC9-204ENST00000406451 LCE1AQ5T7P2 110 aa1.49□□□□□ -2.17
HDAC9-204ENST00000406451 LCE1DQ5T752 114 aa1.49□□□□□ -2.17
HDAC9-204ENST00000406451 MT1AP04731 61 aa1.48□□□□□ -2.17
HDAC9-204ENST00000406451 LCE1BQ5T7P3 118 aa1.47□□□□□ -2.17
HDAC9-204ENST00000406451 MDN1Q9NU22 5596 aa1.47□□□□□ -2.17
HDAC9-204ENST00000406451 OBSCNQ5VST9 7968 aa1.44□□□□□ -2.18
HDAC9-204ENST00000406451 KRTAP2-2Q9BYT5 123 aa1.43□□□□□ -2.18
HDAC9-204ENST00000406451 FSIP2Q5CZC0 6907 aa1.43□□□□□ -2.18
HDAC9-204ENST00000406451 LCE4AQ5TA78 99 aa1.43□□□□□ -2.18
HDAC9-204ENST00000406451 LCE5AQ5TCM9 118 aa1.42□□□□□ -2.18
HDAC9-204ENST00000406451 NEBP20929 6669 aa1.41□□□□□ -2.18
HDAC9-204ENST00000406451 KRTAP4-9Q9BYQ8 210 aa1.4□□□□□ -2.19
HDAC9-204ENST00000406451 PRM1P04553 51 aa1.4□□□□□ -2.19
HDAC9-204ENST00000406451 MUC5BQ9HC84 5762 aaPredicted RBP1.39□□□□□ -2.19
HDAC9-204ENST00000406451 KRTAP6-2Q3LI66 62 aa1.38□□□□□ -2.19
HDAC9-204ENST00000406451 KRTAP6-1Q3LI64 71 aa1.38□□□□□ -2.19
HDAC9-204ENST00000406451 GPR98Q8WXG9 6306 aa1.38□□□□□ -2.19
HDAC9-204ENST00000406451 KMT2DO14686 5537 aa1.37□□□□□ -2.19
HDAC9-204ENST00000406451 KRTAP9-4Q9BYQ2 154 aa1.36□□□□□ -2.19
HDAC9-204ENST00000406451 MUC12Q9UKN1 5478 aa1.35□□□□□ -2.19
HDAC9-204ENST00000406451 FCGBPQ9Y6R7 5405 aaPredicted RBP1.35□□□□□ -2.19
HDAC9-204ENST00000406451 KRTAP9-6A8MVA2 160 aa1.32□□□□□ -2.2
HDAC9-204ENST00000406451 SYNE2Q8WXH0 6885 aaKnown RBP1.31□□□□□ -2.2
HDAC9-204ENST00000406451 KRTAP5-9P26371 169 aa1.3□□□□□ -2.2
HDAC9-204ENST00000406451 AHNAK2Q8IVF2 5795 aa1.29□□□□□ -2.2
HDAC9-204ENST00000406451 HMCN1Q96RW7 5635 aa1.28□□□□□ -2.2
HDAC9-204ENST00000406451 MACF1Q9UPN3 7388 aaKnown RBP1.28□□□□□ -2.21
HDAC9-204ENST00000406451 LCE1CQ5T751 118 aa1.28□□□□□ -2.21
HDAC9-204ENST00000406451 LCE1EQ5T753 118 aa1.28□□□□□ -2.21
HDAC9-204ENST00000406451 LCE1FQ5T754 118 aa1.28□□□□□ -2.21
HDAC9-204ENST00000406451 DSTQ03001 7570 aaKnown RBP1.28□□□□□ -2.21
HDAC9-204ENST00000406451 KRTAP9-9Q9BYP9 154 aa1.26□□□□□ -2.21
HDAC9-204ENST00000406451 AHNAKQ09666 5890 aaKnown RBP1.21□□□□□ -2.22
HDAC9-204ENST00000406451 KRTAP4-6Q9BYQ5 205 aa1.2□□□□□ -2.22
HDAC9-204ENST00000406451 KRTAP20-2Q3LI61 65 aa1.19□□□□□ -2.22
HDAC9-204ENST00000406451 MUC19Q7Z5P9 8384 aa1.19□□□□□ -2.22
HDAC9-204ENST00000406451 KRTAP5-5Q701N2 237 aaPredicted RBP1.15□□□□□ -2.23
HDAC9-204ENST00000406451 KRTAP5-4Q6L8H1 288 aa1.14□□□□□ -2.23
HDAC9-204ENST00000406451 MUC5ACP98088 5654 aa1.11□□□□□ -2.23
HDAC9-204ENST00000406451 KRTAP4-11Q9BYQ6 195 aa1.09□□□□□ -2.23
HDAC9-204ENST00000406451 KRTAP4-12Q9BQ66 201 aa1.04□□□□□ -2.24
HDAC9-204ENST00000406451 KRTAP4-2Q9BYR5 136 aa1.04□□□□□ -2.24
HDAC9-204ENST00000406451 KRTAP5-2Q701N4 177 aa1.03□□□□□ -2.25
HDAC9-204ENST00000406451 KRTAP4-4Q9BYR3 166 aa1.02□□□□□ -2.25
HDAC9-204ENST00000406451 KRTAP5-3Q6L8H2 238 aa1□□□□□ -2.25
HDAC9-204ENST00000406451 KRTAP5-8O75690 187 aa0.97□□□□□ -2.25
HDAC9-204ENST00000406451 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.97□□□□□ -2.25
HDAC9-204ENST00000406451 KRTAP5-10Q6L8G5 202 aa0.93□□□□□ -2.26
HDAC9-204ENST00000406451 KRTAP5-7Q6L8G8 165 aa0.9□□□□□ -2.27
HDAC9-204ENST00000406451 KRTAP5-1Q6L8H4 278 aa0.89□□□□□ -2.27
HDAC9-204ENST00000406451 KRTAP5-11Q6L8G4 156 aa0.86□□□□□ -2.27
HDAC9-204ENST00000406451 PHGR1C9JFL3 82 aa0.82□□□□□ -2.28
HDAC9-204ENST00000406451 KRTAP21-1Q3LI58 79 aa0.79□□□□□ -2.28
HDAC9-204ENST00000406451 KRTAP21-2Q3LI59 83 aa0.75□□□□□ -2.29
HDAC9-204ENST00000406451 MUC16Q8WXI7 14507 aa0.5□□□□□ -2.33
Retrieved 77 of 20,778 RNA–protein pairs in 67.7 ms