RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 A0A1B0GUL6 1792 aa-0.17□□□□□ -2.44
HMGB1P17-201ENST00000403495 NFAT5O94916 1531 aa-0.17□□□□□ -2.44
HMGB1P17-201ENST00000403495 CROCC2H7BZ55 1655 aa-0.18□□□□□ -2.44
HMGB1P17-201ENST00000403495 ABCA10Q8WWZ4 1543 aa-0.18□□□□□ -2.44
HMGB1P17-201ENST00000403495 IGIPA6NJ69 53 aa-0.18□□□□□ -2.44
HMGB1P17-201ENST00000403495 MT2AP02795 61 aa-0.18□□□□□ -2.44
HMGB1P17-201ENST00000403495 TFF3Q07654 80 aa-0.19□□□□□ -2.44
HMGB1P17-201ENST00000403495 PRXQ9BXM0 1461 aa-0.19□□□□□ -2.44
HMGB1P17-201ENST00000403495 ALS2Q96Q42 1657 aa-0.19□□□□□ -2.44
HMGB1P17-201ENST00000403495 MAST1Q9Y2H9 1570 aa-0.19□□□□□ -2.44
HMGB1P17-201ENST00000403495 MT1GP13640 62 aa-0.2□□□□□ -2.44
HMGB1P17-201ENST00000403495 DEFB131AP59861 70 aa-0.2□□□□□ -2.44
HMGB1P17-201ENST00000403495 ADCY10Q96PN6 1610 aa-0.2□□□□□ -2.44
HMGB1P17-201ENST00000403495 NRXN3Q9Y4C0 1643 aa-0.2□□□□□ -2.44
HMGB1P17-201ENST00000403495 FAM208AQ9UK61 1670 aaKnown RBP-0.21□□□□□ -2.44
HMGB1P17-201ENST00000403495 ERICH3Q5RHP9 1530 aa-0.21□□□□□ -2.44
HMGB1P17-201ENST00000403495 POLR2KP53803 58 aaKnown RBP-0.21□□□□□ -2.44
HMGB1P17-201ENST00000403495 KRTAP19-2Q3LHN2 52 aa-0.21□□□□□ -2.44
HMGB1P17-201ENST00000403495 SMIM2Q9BVW6 85 aa-0.21□□□□□ -2.44
HMGB1P17-201ENST00000403495 KRTAP19-5Q3LI72 72 aa-0.22□□□□□ -2.44
HMGB1P17-201ENST00000403495 MT1MQ8N339 61 aa-0.22□□□□□ -2.44
HMGB1P17-201ENST00000403495 CMC2Q9NRP2 79 aa-0.22□□□□□ -2.44
HMGB1P17-201ENST00000403495 MROH2BQ7Z745 1585 aa-0.23□□□□□ -2.45
HMGB1P17-201ENST00000403495 IQGAP1P46940 1657 aa-0.24□□□□□ -2.45
HMGB1P17-201ENST00000403495 LMO7Q8WWI1 1683 aa-0.24□□□□□ -2.45
HMGB1P17-201ENST00000403495 SYCP2Q9BX26 1530 aa-0.24□□□□□ -2.45
HMGB1P17-201ENST00000403495 RPS29P62273 56 aaKnown RBP-0.25□□□□□ -2.45
HMGB1P17-201ENST00000403495 MT1XP80297 61 aa-0.25□□□□□ -2.45
HMGB1P17-201ENST00000403495 AGLP35573 1532 aa-0.25□□□□□ -2.45
HMGB1P17-201ENST00000403495 ABCA5Q8WWZ7 1642 aa-0.25□□□□□ -2.45
HMGB1P17-201ENST00000403495 ABCC8Q09428 1581 aa-0.26□□□□□ -2.45
HMGB1P17-201ENST00000403495 MT1EP04732 61 aa-0.26□□□□□ -2.45
HMGB1P17-201ENST00000403495 LEAP2Q969E1 77 aa-0.26□□□□□ -2.45
HMGB1P17-201ENST00000403495 MROH2AA6NES4 1674 aa-0.27□□□□□ -2.45
HMGB1P17-201ENST00000403495 DEFB4AO15263 64 aa-0.27□□□□□ -2.45
HMGB1P17-201ENST00000403495 MT1LQ93083 61 aa-0.27□□□□□ -2.45
HMGB1P17-201ENST00000403495 TTTY10Q9BZA0 68 aa-0.27□□□□□ -2.45
HMGB1P17-201ENST00000403495 CLTCL1P53675 1640 aa-0.27□□□□□ -2.45
HMGB1P17-201ENST00000403495 NDUFA1O15239 70 aa-0.28□□□□□ -2.45
HMGB1P17-201ENST00000403495 STATHP02808 62 aa-0.28□□□□□ -2.45
HMGB1P17-201ENST00000403495 DEFB136Q30KP8 78 aa-0.28□□□□□ -2.45
HMGB1P17-201ENST00000403495 DDX60Q8IY21 1712 aaKnown RBP-0.28□□□□□ -2.45
HMGB1P17-201ENST00000403495 TRPM2O94759 1503 aa-0.28□□□□□ -2.45
HMGB1P17-201ENST00000403495 SNRPGP15A8MWD9 76 aa-0.29□□□□□ -2.46
HMGB1P17-201ENST00000403495 TOMM7Q9P0U1 55 aa-0.29□□□□□ -2.46
HMGB1P17-201ENST00000403495 FANCD2Q9BXW9 1451 aa-0.29□□□□□ -2.46
HMGB1P17-201ENST00000403495 TOMM5Q8N4H5 51 aa-0.32□□□□□ -2.46
HMGB1P17-201ENST00000403495 SAMD9LQ8IVG5 1584 aa-0.32□□□□□ -2.46
HMGB1P17-201ENST00000403495 DUOX1Q9NRD9 1551 aa-0.33□□□□□ -2.46
HMGB1P17-201ENST00000403495 LINC01590Q5TEZ4 76 aa-0.34□□□□□ -2.46
HMGB1P17-201ENST00000403495 RHPN1-AS1Q9BWJ2 59 aa-0.34□□□□□ -2.46
HMGB1P17-201ENST00000403495 ATP7AQ04656 1500 aa-0.35□□□□□ -2.47
HMGB1P17-201ENST00000403495 HTN1P15515 57 aa-0.37□□□□□ -2.47
HMGB1P17-201ENST00000403495 A0A096LNI7 61 aa-0.38□□□□□ -2.47
HMGB1P17-201ENST00000403495 H3BSH0 61 aa-0.38□□□□□ -2.47
HMGB1P17-201ENST00000403495 RPL39P62891 51 aaKnown RBP-0.38□□□□□ -2.47
HMGB1P17-201ENST00000403495 DEFB133Q30KQ1 61 aa-0.38□□□□□ -2.47
HMGB1P17-201ENST00000403495 IQGAP2Q13576 1575 aa-0.38□□□□□ -2.47
HMGB1P17-201ENST00000403495 CD52P31358 61 aa-0.4□□□□□ -2.47
HMGB1P17-201ENST00000403495 RPL39LQ96EH5 51 aaKnown RBP-0.41□□□□□ -2.48
HMGB1P17-201ENST00000403495 DEFB108AA8MXU0 73 aa-0.44□□□□□ -2.48
HMGB1P17-201ENST00000403495 HTN3P15516 51 aa-0.45□□□□□ -2.48
HMGB1P17-201ENST00000403495 TOP2AP11388 1531 aaKnown RBP-0.45□□□□□ -2.48
HMGB1P17-201ENST00000403495 H3BUX3 64 aa-0.49□□□□□ -2.49
HMGB1P17-201ENST00000403495 LINC01556Q5JQF7 62 aa-0.49□□□□□ -2.49
HMGB1P17-201ENST00000403495 DEFB108BQ8NET1 73 aa-0.49□□□□□ -2.49
HMGB1P17-201ENST00000403495 COX14Q96I36 57 aa-0.51□□□□□ -2.49
HMGB1P17-201ENST00000403495 ARHGAP5-AS1Q96IT6 56 aa-0.51□□□□□ -2.49
HMGB1P17-201ENST00000403495 K7EIM0 57 aa-0.53□□□□□ -2.49
HMGB1P17-201ENST00000403495 APELAP0DMC3 54 aa-0.53□□□□□ -2.49
HMGB1P17-201ENST00000403495 SNRPGP62308 76 aaKnown RBP-0.53□□□□□ -2.49
HMGB1P17-201ENST00000403495 Q9Y3F1 56 aa-0.53□□□□□ -2.49
HMGB1P17-201ENST00000403495 PRCDQ00LT1 54 aa-0.55□□□□□ -2.5
HMGB1P17-201ENST00000403495 GCC2Q8IWJ2 1684 aa-0.57□□□□□ -2.5
HMGB1P17-201ENST00000403495 A0A096LPF7 62 aa-0.58□□□□□ -2.5
HMGB1P17-201ENST00000403495 TMEM167AQ8TBQ9 72 aa-0.58□□□□□ -2.5
HMGB1P17-201ENST00000403495 RPL39P5Q59GN2 51 aa-0.64□□□□□ -2.51
Retrieved 77 of 20,778 RNA–protein pairs in 58.4 ms