RNA–Protein interactions for RNA: ENST00000402813.7

CNGA1-202, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNGA1, Length 2,867 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-202ENST00000402813 AHNAKQ09666 5890 aaKnown RBP2.08□□□□□ -2.08
CNGA1-202ENST00000402813 SPRR2GQ9BYE4 73 aa2.07□□□□□ -2.08
CNGA1-202ENST00000402813 KRTAP10-5P60370 271 aa2.04□□□□□ -2.08
CNGA1-202ENST00000402813 SSPOA2VEC9 5147 aa2.04□□□□□ -2.08
CNGA1-202ENST00000402813 SMR3BP02814 79 aaPredicted RBP2.04□□□□□ -2.08
CNGA1-202ENST00000402813 KRTAP5-4Q6L8H1 288 aa2.04□□□□□ -2.08
CNGA1-202ENST00000402813 KRTAP8-1Q8IUC2 63 aa2.03□□□□□ -2.08
CNGA1-202ENST00000402813 MUC2Q02817 5179 aa2.02□□□□□ -2.09
CNGA1-202ENST00000402813 KRTAP5-7Q6L8G8 165 aa2.02□□□□□ -2.09
CNGA1-202ENST00000402813 FAT4Q6V0I7 4981 aa2.01□□□□□ -2.09
CNGA1-202ENST00000402813 HMCN2Q8NDA2 5059 aa2.01□□□□□ -2.09
CNGA1-202ENST00000402813 RNF213Q63HN8 5207 aa2.01□□□□□ -2.09
CNGA1-202ENST00000402813 NEBP20929 6669 aa2□□□□□ -2.09
CNGA1-202ENST00000402813 KRTAP19-8Q3LI54 63 aa2□□□□□ -2.09
CNGA1-202ENST00000402813 KRTAP20-1Q3LI63 56 aa2□□□□□ -2.09
CNGA1-202ENST00000402813 KRTAP5-1Q6L8H4 278 aa1.99□□□□□ -2.09
CNGA1-202ENST00000402813 LCE3DQ9BYE3 92 aa1.96□□□□□ -2.1
CNGA1-202ENST00000402813 KRTAP4-4Q9BYR3 166 aa1.96□□□□□ -2.1
CNGA1-202ENST00000402813 KRTAP12-3P60328 96 aa1.9□□□□□ -2.11
CNGA1-202ENST00000402813 KRTAP5-8O75690 187 aa1.87□□□□□ -2.11
CNGA1-202ENST00000402813 KRTAP4-1Q9BYQ7 146 aa1.86□□□□□ -2.11
CNGA1-202ENST00000402813 KRTAP2-3P0C7H8 128 aa1.82□□□□□ -2.12
CNGA1-202ENST00000402813 KRTAP2-4Q9BYR9 128 aa1.82□□□□□ -2.12
CNGA1-202ENST00000402813 KRTAP2-1Q9BYU5 128 aa1.82□□□□□ -2.12
CNGA1-202ENST00000402813 LCE3AQ5TA76 89 aa1.82□□□□□ -2.12
CNGA1-202ENST00000402813 LRP2P98164 4655 aa1.81□□□□□ -2.12
CNGA1-202ENST00000402813 KRTAP5-5Q701N2 237 aaPredicted RBP1.79□□□□□ -2.12
CNGA1-202ENST00000402813 MT2AP02795 61 aa1.77□□□□□ -2.13
CNGA1-202ENST00000402813 MT1XP80297 61 aa1.77□□□□□ -2.13
CNGA1-202ENST00000402813 KRTAP5-2Q701N4 177 aa1.77□□□□□ -2.13
CNGA1-202ENST00000402813 FSIP2Q5CZC0 6907 aa1.77□□□□□ -2.13
CNGA1-202ENST00000402813 MT1BP07438 61 aa1.77□□□□□ -2.13
CNGA1-202ENST00000402813 MT1HP80294 61 aa1.77□□□□□ -2.13
CNGA1-202ENST00000402813 M0R2T5 61 aa1.76□□□□□ -2.13
CNGA1-202ENST00000402813 KRTAP4-3Q9BYR4 195 aa1.75□□□□□ -2.13
CNGA1-202ENST00000402813 LPAP08519 4548 aa1.73□□□□□ -2.13
CNGA1-202ENST00000402813 MT1EP04732 61 aa1.72□□□□□ -2.13
CNGA1-202ENST00000402813 MT1FP04733 61 aa1.71□□□□□ -2.14
CNGA1-202ENST00000402813 KRTAP19-5Q3LI72 72 aa1.69□□□□□ -2.14
CNGA1-202ENST00000402813 KRTAP5-10Q6L8G5 202 aa1.66□□□□□ -2.14
CNGA1-202ENST00000402813 MT1LQ93083 61 aa1.65□□□□□ -2.15
CNGA1-202ENST00000402813 MT1AP04731 61 aa1.62□□□□□ -2.15
CNGA1-202ENST00000402813 SYNE2Q8WXH0 6885 aaKnown RBP1.62□□□□□ -2.15
CNGA1-202ENST00000402813 KRTAP9-6A8MVA2 160 aa1.62□□□□□ -2.15
CNGA1-202ENST00000402813 USH2AO75445 5202 aa1.62□□□□□ -2.15
CNGA1-202ENST00000402813 AHNAK2Q8IVF2 5795 aa1.61□□□□□ -2.15
CNGA1-202ENST00000402813 FCGBPQ9Y6R7 5405 aaPredicted RBP1.61□□□□□ -2.15
CNGA1-202ENST00000402813 OBSCNQ5VST9 7968 aa1.61□□□□□ -2.15
CNGA1-202ENST00000402813 MACF1Q9UPN3 7388 aaKnown RBP1.59□□□□□ -2.16
CNGA1-202ENST00000402813 KRTAP19-7Q3SYF9 63 aa1.58□□□□□ -2.16
CNGA1-202ENST00000402813 PRM1P04553 51 aa1.56□□□□□ -2.16
CNGA1-202ENST00000402813 KRTAP19-6Q3LI70 58 aa1.55□□□□□ -2.16
CNGA1-202ENST00000402813 MT1GP13640 62 aa1.55□□□□□ -2.16
CNGA1-202ENST00000402813 MT1MQ8N339 61 aa1.49□□□□□ -2.17
CNGA1-202ENST00000402813 LCE1CQ5T751 118 aa1.49□□□□□ -2.17
CNGA1-202ENST00000402813 LCE1BQ5T7P3 118 aa1.49□□□□□ -2.17
CNGA1-202ENST00000402813 KRTAP19-3Q7Z4W3 81 aa1.47□□□□□ -2.17
CNGA1-202ENST00000402813 MUC5ACP98088 5654 aa1.46□□□□□ -2.18
CNGA1-202ENST00000402813 KMT2DO14686 5537 aa1.44□□□□□ -2.18
CNGA1-202ENST00000402813 MUC12Q9UKN1 5478 aa1.44□□□□□ -2.18
CNGA1-202ENST00000402813 SPRR2AP35326 72 aa1.41□□□□□ -2.18
CNGA1-202ENST00000402813 SPRR2FQ96RM1 72 aa1.41□□□□□ -2.18
CNGA1-202ENST00000402813 MDN1Q9NU22 5596 aa1.4□□□□□ -2.18
CNGA1-202ENST00000402813 SPRR2EP22531 72 aa1.4□□□□□ -2.19
CNGA1-202ENST00000402813 SPRR2BP35325 72 aa1.4□□□□□ -2.19
CNGA1-202ENST00000402813 SPRR2DP22532 72 aa1.37□□□□□ -2.19
CNGA1-202ENST00000402813 SYNE1Q8NF91 8797 aaKnown RBP1.29□□□□□ -2.2
CNGA1-202ENST00000402813 DSTQ03001 7570 aaKnown RBP1.27□□□□□ -2.21
CNGA1-202ENST00000402813 KRTAP21-1Q3LI58 79 aa1.24□□□□□ -2.21
CNGA1-202ENST00000402813 KRTAP6-1Q3LI64 71 aa1.23□□□□□ -2.21
CNGA1-202ENST00000402813 KRTAP6-2Q3LI66 62 aa1.23□□□□□ -2.21
CNGA1-202ENST00000402813 MUC19Q7Z5P9 8384 aa1.21□□□□□ -2.22
CNGA1-202ENST00000402813 MT4P47944 62 aa1.17□□□□□ -2.22
CNGA1-202ENST00000402813 KRTAP20-2Q3LI61 65 aa1.03□□□□□ -2.24
CNGA1-202ENST00000402813 KRTAP21-2Q3LI59 83 aa0.87□□□□□ -2.27
CNGA1-202ENST00000402813 MUC16Q8WXI7 14507 aa0.84□□□□□ -2.27
CNGA1-202ENST00000402813 PHGR1C9JFL3 82 aa0.84□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 75.2 ms