RNA–Protein interactions for RNA: ENST00000400911.7

VAMP1-203, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-203ENST00000400911 CAMK2N1Q7Z7J9 78 aa5.33□□□□□ -1.56
VAMP1-203ENST00000400911 UQCR11O14957 56 aa5.32□□□□□ -1.56
VAMP1-203ENST00000400911 SPATA8Q6RVD6 105 aa5.31□□□□□ -1.56
VAMP1-203ENST00000400911 MT1GP13640 62 aa5.29□□□□□ -1.56
VAMP1-203ENST00000400911 KRTAP5-10Q6L8G5 202 aa5.28□□□□□ -1.56
VAMP1-203ENST00000400911 A0A0D9SG42 100 aa5.27□□□□□ -1.57
VAMP1-203ENST00000400911 KRTAP13-4Q3LI77 160 aa5.27□□□□□ -1.57
VAMP1-203ENST00000400911 KRTAP19-5Q3LI72 72 aa5.24□□□□□ -1.57
VAMP1-203ENST00000400911 PP632Q6XCG6 107 aa5.24□□□□□ -1.57
VAMP1-203ENST00000400911 A6NED7 52 aa5.22□□□□□ -1.57
VAMP1-203ENST00000400911 MIR22HGQ0VDD5 57 aa5.22□□□□□ -1.57
VAMP1-203ENST00000400911 KRTAP19-4Q3LI73 84 aa5.21□□□□□ -1.58
VAMP1-203ENST00000400911 MT1MQ8N339 61 aa5.2□□□□□ -1.58
VAMP1-203ENST00000400911 SPINT4Q6UDR6 99 aa5.19□□□□□ -1.58
VAMP1-203ENST00000400911 KRTAP5-4Q6L8H1 288 aa5.18□□□□□ -1.58
VAMP1-203ENST00000400911 A8MU10 97 aa5.17□□□□□ -1.58
VAMP1-203ENST00000400911 K7ERS5 55 aa5.14□□□□□ -1.59
VAMP1-203ENST00000400911 MT1LQ93083 61 aa5.13□□□□□ -1.59
VAMP1-203ENST00000400911 KRTAP4-3Q9BYR4 195 aa5.13□□□□□ -1.59
VAMP1-203ENST00000400911 KRTAP5-7Q6L8G8 165 aa5.12□□□□□ -1.59
VAMP1-203ENST00000400911 KRTAP12-1P59990 96 aa5.1□□□□□ -1.59
VAMP1-203ENST00000400911 KRTAP5-3Q6L8H2 238 aa5.07□□□□□ -1.6
VAMP1-203ENST00000400911 KRTAP4-7Q9BYR0 210 aa5.04□□□□□ -1.6
VAMP1-203ENST00000400911 CDC42SE1Q9NRR8 79 aa5.04□□□□□ -1.6
VAMP1-203ENST00000400911 BRK1Q8WUW1 75 aa4.96□□□□□ -1.62
VAMP1-203ENST00000400911 C10orf95Q9H7T3 257 aa4.96□□□□□ -1.62
VAMP1-203ENST00000400911 SPRR5A0A1B0GTR4 108 aa4.93□□□□□ -1.62
VAMP1-203ENST00000400911 KRTAP20-2Q3LI61 65 aa4.93□□□□□ -1.62
VAMP1-203ENST00000400911 LCE3AQ5TA76 89 aa4.92□□□□□ -1.62
VAMP1-203ENST00000400911 TNP1P09430 55 aa4.84□□□□□ -1.63
VAMP1-203ENST00000400911 KRTAP4-2Q9BYR5 136 aa4.84□□□□□ -1.63
VAMP1-203ENST00000400911 KRTAP4-11Q9BYQ6 195 aa4.83□□□□□ -1.64
VAMP1-203ENST00000400911 KRTAP5-5Q701N2 237 aaPredicted RBP4.81□□□□□ -1.64
VAMP1-203ENST00000400911 KRTAP12-4P60329 112 aa4.79□□□□□ -1.64
VAMP1-203ENST00000400911 ROMO1P60602 79 aa4.77□□□□□ -1.65
VAMP1-203ENST00000400911 KRTAP25-1Q3LHN0 102 aa4.75□□□□□ -1.65
VAMP1-203ENST00000400911 KRTAP12-3P60328 96 aa4.73□□□□□ -1.65
VAMP1-203ENST00000400911 SYNE1Q8NF91 8797 aaKnown RBP4.72□□□□□ -1.65
VAMP1-203ENST00000400911 PMAIP1Q13794 54 aa4.7□□□□□ -1.66
VAMP1-203ENST00000400911 PRO0628Q9UI54 55 aa4.69□□□□□ -1.66
VAMP1-203ENST00000400911 KRTAP23-1A1A580 65 aa4.57□□□□□ -1.68
VAMP1-203ENST00000400911 AHNAKQ09666 5890 aaKnown RBP4.51□□□□□ -1.69
VAMP1-203ENST00000400911 MUC5ACP98088 5654 aa4.5□□□□□ -1.69
VAMP1-203ENST00000400911 MUC5BQ9HC84 5762 aaPredicted RBP4.48□□□□□ -1.69
VAMP1-203ENST00000400911 KRTAP5-2Q701N4 177 aa4.47□□□□□ -1.69
VAMP1-203ENST00000400911 KRTAP5-8O75690 187 aa4.45□□□□□ -1.7
VAMP1-203ENST00000400911 KRTAP6-1Q3LI64 71 aa4.38□□□□□ -1.71
VAMP1-203ENST00000400911 KTN1-AS1Q86SY8 53 aa4.38□□□□□ -1.71
VAMP1-203ENST00000400911 MT1AP04731 61 aa4.34□□□□□ -1.71
VAMP1-203ENST00000400911 PRAC1Q96KF2 57 aa4.34□□□□□ -1.71
VAMP1-203ENST00000400911 KRTAP15-1Q3LI76 137 aa4.33□□□□□ -1.72
VAMP1-203ENST00000400911 LCE3CQ5T5A8 94 aa4.32□□□□□ -1.72
VAMP1-203ENST00000400911 OBSCNQ5VST9 7968 aa4.28□□□□□ -1.72
VAMP1-203ENST00000400911 KRTAP6-2Q3LI66 62 aa4.26□□□□□ -1.73
VAMP1-203ENST00000400911 SVIPQ8NHG7 77 aa4.21□□□□□ -1.74
VAMP1-203ENST00000400911 KRTAP9-6A8MVA2 160 aa4.1□□□□□ -1.75
VAMP1-203ENST00000400911 KRTAP5-1Q6L8H4 278 aa4.1□□□□□ -1.75
VAMP1-203ENST00000400911 MT3P25713 68 aa4□□□□□ -1.77
VAMP1-203ENST00000400911 LCE1EQ5T753 118 aa3.76□□□□□ -1.81
VAMP1-203ENST00000400911 LUZP6Q538Z0 58 aa3.74□□□□□ -1.81
VAMP1-203ENST00000400911 LCE1BQ5T7P3 118 aa3.61□□□□□ -1.83
VAMP1-203ENST00000400911 A0A0A0MQY5 61 aa3.55□□□□□ -1.84
VAMP1-203ENST00000400911 LCE1CQ5T751 118 aa3.5□□□□□ -1.85
VAMP1-203ENST00000400911 NDUFAF8A1L188 74 aa3.36□□□□□ -1.87
VAMP1-203ENST00000400911 KRTAP5-11Q6L8G4 156 aa3.27□□□□□ -1.89
VAMP1-203ENST00000400911 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.21□□□□□ -1.9
VAMP1-203ENST00000400911 LCE1FQ5T754 118 aa3.19□□□□□ -1.9
VAMP1-203ENST00000400911 PHGR1C9JFL3 82 aa3.1□□□□□ -1.91
VAMP1-203ENST00000400911 LCE3DQ9BYE3 92 aa3.09□□□□□ -1.91
VAMP1-203ENST00000400911 LCE3EQ5T5B0 92 aa2.98□□□□□ -1.93
VAMP1-203ENST00000400911 KRTAP21-2Q3LI59 83 aa2.88□□□□□ -1.95
VAMP1-203ENST00000400911 INE1O15225 51 aa2.81□□□□□ -1.96
VAMP1-203ENST00000400911 KRTAP4-4Q9BYR3 166 aa2.73□□□□□ -1.97
VAMP1-203ENST00000400911 MUC19Q7Z5P9 8384 aa2.67□□□□□ -1.98
VAMP1-203ENST00000400911 PRM1P04553 51 aa2.45□□□□□ -2.02
VAMP1-203ENST00000400911 KRTAP21-1Q3LI58 79 aa2.35□□□□□ -2.03
VAMP1-203ENST00000400911 MUC16Q8WXI7 14507 aa1.9□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 6.5 ms