RNA–Protein interactions for RNA: ENST00000397938.6

EWSR1-206, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-206ENST00000397938 KRTAP4-3Q9BYR4 195 aa5.55□□□□□ -1.52
EWSR1-206ENST00000397938 KRTAP9-2Q9BYQ4 174 aa5.53□□□□□ -1.52
EWSR1-206ENST00000397938 MT1GP13640 62 aa5.52□□□□□ -1.53
EWSR1-206ENST00000397938 KRTAP12-4P60329 112 aa5.45□□□□□ -1.54
EWSR1-206ENST00000397938 KRTAP19-6Q3LI70 58 aa5.44□□□□□ -1.54
EWSR1-206ENST00000397938 MT1MQ8N339 61 aa5.44□□□□□ -1.54
EWSR1-206ENST00000397938 KRTAP19-3Q7Z4W3 81 aa5.4□□□□□ -1.55
EWSR1-206ENST00000397938 FSIP2Q5CZC0 6907 aa5.38□□□□□ -1.55
EWSR1-206ENST00000397938 CRCT1Q9UGL9 99 aa5.38□□□□□ -1.55
EWSR1-206ENST00000397938 FCGBPQ9Y6R7 5405 aaPredicted RBP5.33□□□□□ -1.56
EWSR1-206ENST00000397938 MUC12Q9UKN1 5478 aa5.3□□□□□ -1.56
EWSR1-206ENST00000397938 LCE3BQ5TA77 95 aa5.19□□□□□ -1.58
EWSR1-206ENST00000397938 LCE5AQ5TCM9 118 aa5.17□□□□□ -1.58
EWSR1-206ENST00000397938 KRTAP9-6A0A140TA67 174 aa5.16□□□□□ -1.58
EWSR1-206ENST00000397938 KRTAP4-9Q9BYQ8 210 aa5.13□□□□□ -1.59
EWSR1-206ENST00000397938 MT1AP04731 61 aa5.11□□□□□ -1.59
EWSR1-206ENST00000397938 DSTQ03001 7570 aaKnown RBP5.04□□□□□ -1.6
EWSR1-206ENST00000397938 SPRR2FQ96RM1 72 aa5.02□□□□□ -1.61
EWSR1-206ENST00000397938 KRTAP6-1Q3LI64 71 aa5□□□□□ -1.61
EWSR1-206ENST00000397938 SYNE1Q8NF91 8797 aaKnown RBP4.99□□□□□ -1.61
EWSR1-206ENST00000397938 LCE3DQ9BYE3 92 aa4.98□□□□□ -1.61
EWSR1-206ENST00000397938 LCE3EQ5T5B0 92 aa4.95□□□□□ -1.62
EWSR1-206ENST00000397938 MACF1Q9UPN3 7388 aaKnown RBP4.94□□□□□ -1.62
EWSR1-206ENST00000397938 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.92□□□□□ -1.62
EWSR1-206ENST00000397938 KRTAP5-5Q701N2 237 aaPredicted RBP4.92□□□□□ -1.62
EWSR1-206ENST00000397938 KRTAP9-7A8MTY7 169 aa4.9□□□□□ -1.63
EWSR1-206ENST00000397938 PRM1P04553 51 aa4.88□□□□□ -1.63
EWSR1-206ENST00000397938 SYNE2Q8WXH0 6885 aaKnown RBP4.8□□□□□ -1.64
EWSR1-206ENST00000397938 KRTAP5-9P26371 169 aa4.77□□□□□ -1.65
EWSR1-206ENST00000397938 KRTAP6-3Q3LI67 103 aa4.75□□□□□ -1.65
EWSR1-206ENST00000397938 KRTAP6-2Q3LI66 62 aa4.65□□□□□ -1.66
EWSR1-206ENST00000397938 MDN1Q9NU22 5596 aa4.65□□□□□ -1.67
EWSR1-206ENST00000397938 LCE1AQ5T7P2 110 aa4.64□□□□□ -1.67
EWSR1-206ENST00000397938 KRTAP9-4Q9BYQ2 154 aa4.61□□□□□ -1.67
EWSR1-206ENST00000397938 SPRR2EP22531 72 aa4.53□□□□□ -1.68
EWSR1-206ENST00000397938 SPRR2BP35325 72 aa4.53□□□□□ -1.68
EWSR1-206ENST00000397938 SPRR2AP35326 72 aa4.53□□□□□ -1.68
EWSR1-206ENST00000397938 KRTAP4-6Q9BYQ5 205 aa4.51□□□□□ -1.69
EWSR1-206ENST00000397938 NEBP20929 6669 aa4.42□□□□□ -1.7
EWSR1-206ENST00000397938 MT3P25713 68 aa4.41□□□□□ -1.7
EWSR1-206ENST00000397938 SPRR2DP22532 72 aa4.37□□□□□ -1.71
EWSR1-206ENST00000397938 KRTAP2-2Q9BYT5 123 aa4.33□□□□□ -1.72
EWSR1-206ENST00000397938 OBSCNQ5VST9 7968 aa4.22□□□□□ -1.73
EWSR1-206ENST00000397938 KRTAP20-1Q3LI63 56 aa4.15□□□□□ -1.74
EWSR1-206ENST00000397938 KRTAP5-4Q6L8H1 288 aa4.03□□□□□ -1.76
EWSR1-206ENST00000397938 LCE4AQ5TA78 99 aa3.89□□□□□ -1.79
EWSR1-206ENST00000397938 KRTAP5-2Q701N4 177 aa3.84□□□□□ -1.79
EWSR1-206ENST00000397938 LCE1EQ5T753 118 aa3.81□□□□□ -1.8
EWSR1-206ENST00000397938 MT4P47944 62 aa3.79□□□□□ -1.8
EWSR1-206ENST00000397938 MUC5ACP98088 5654 aa3.79□□□□□ -1.8
EWSR1-206ENST00000397938 KRTAP20-2Q3LI61 65 aa3.78□□□□□ -1.8
EWSR1-206ENST00000397938 LCE1DQ5T752 114 aa3.78□□□□□ -1.8
EWSR1-206ENST00000397938 HMCN1Q96RW7 5635 aa3.71□□□□□ -1.82
EWSR1-206ENST00000397938 KRTAP4-11Q9BYQ6 195 aa3.64□□□□□ -1.83
EWSR1-206ENST00000397938 KRTAP5-10Q6L8G5 202 aa3.63□□□□□ -1.83
EWSR1-206ENST00000397938 KRTAP5-3Q6L8H2 238 aa3.63□□□□□ -1.83
EWSR1-206ENST00000397938 KRTAP5-1Q6L8H4 278 aa3.54□□□□□ -1.84
EWSR1-206ENST00000397938 LCE1BQ5T7P3 118 aa3.5□□□□□ -1.85
EWSR1-206ENST00000397938 KRTAP9-9Q9BYP9 154 aa3.41□□□□□ -1.86
EWSR1-206ENST00000397938 AHNAK2Q8IVF2 5795 aa3.38□□□□□ -1.87
EWSR1-206ENST00000397938 KRTAP4-2Q9BYR5 136 aa3.37□□□□□ -1.87
EWSR1-206ENST00000397938 LCE1CQ5T751 118 aa3.34□□□□□ -1.88
EWSR1-206ENST00000397938 KRTAP4-12Q9BQ66 201 aa3.28□□□□□ -1.88
EWSR1-206ENST00000397938 KRTAP21-2Q3LI59 83 aa3.22□□□□□ -1.89
EWSR1-206ENST00000397938 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.19□□□□□ -1.9
EWSR1-206ENST00000397938 LCE1FQ5T754 118 aa3.16□□□□□ -1.9
EWSR1-206ENST00000397938 KRTAP5-8O75690 187 aa3.13□□□□□ -1.91
EWSR1-206ENST00000397938 KRTAP21-1Q3LI58 79 aa3.12□□□□□ -1.91
EWSR1-206ENST00000397938 GPR98Q8WXG9 6306 aa3.12□□□□□ -1.91
EWSR1-206ENST00000397938 KRTAP5-7Q6L8G8 165 aa3.04□□□□□ -1.92
EWSR1-206ENST00000397938 KRTAP4-4Q9BYR3 166 aa2.93□□□□□ -1.94
EWSR1-206ENST00000397938 KRTAP5-11Q6L8G4 156 aa2.84□□□□□ -1.95
EWSR1-206ENST00000397938 MUC19Q7Z5P9 8384 aa2.84□□□□□ -1.96
EWSR1-206ENST00000397938 MUC5BQ9HC84 5762 aaPredicted RBP2.77□□□□□ -1.97
EWSR1-206ENST00000397938 AHNAKQ09666 5890 aaKnown RBP2.57□□□□□ -2
EWSR1-206ENST00000397938 PHGR1C9JFL3 82 aa2.45□□□□□ -2.02
EWSR1-206ENST00000397938 MUC16Q8WXI7 14507 aa1.7□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 138.6 ms