RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 KRTAP9-6A0A140TA67 174 aa4.7□□□□□ -1.66
GNE-202ENST00000396594 KRTAP6-3Q3LI67 103 aa4.69□□□□□ -1.66
GNE-202ENST00000396594 KRTAP19-7Q3SYF9 63 aa4.66□□□□□ -1.66
GNE-202ENST00000396594 LYSTQ99698 3801 aa4.63□□□□□ -1.67
GNE-202ENST00000396594 KRTAP4-7Q9BYR0 210 aa4.6□□□□□ -1.67
GNE-202ENST00000396594 LCE4AQ5TA78 99 aa4.59□□□□□ -1.68
GNE-202ENST00000396594 KRTAP2-3P0C7H8 128 aa4.57□□□□□ -1.68
GNE-202ENST00000396594 KRTAP2-4Q9BYR9 128 aa4.57□□□□□ -1.68
GNE-202ENST00000396594 KRTAP2-1Q9BYU5 128 aa4.57□□□□□ -1.68
GNE-202ENST00000396594 KRTAP20-1Q3LI63 56 aa4.56□□□□□ -1.68
GNE-202ENST00000396594 MT4P47944 62 aa4.53□□□□□ -1.68
GNE-202ENST00000396594 HYDINQ4G0P3 5121 aa4.5□□□□□ -1.69
GNE-202ENST00000396594 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.49□□□□□ -1.69
GNE-202ENST00000396594 ABCA13Q86UQ4 5058 aa4.47□□□□□ -1.69
GNE-202ENST00000396594 PRM1P04553 51 aa4.44□□□□□ -1.7
GNE-202ENST00000396594 EPPK1P58107 5090 aaKnown RBP4.41□□□□□ -1.7
GNE-202ENST00000396594 LCE5AQ5TCM9 118 aa4.4□□□□□ -1.71
GNE-202ENST00000396594 KRTAP9-7A8MTY7 169 aa4.38□□□□□ -1.71
GNE-202ENST00000396594 KRTAP9-4Q9BYQ2 154 aa4.37□□□□□ -1.71
GNE-202ENST00000396594 LCE1DQ5T752 114 aa4.36□□□□□ -1.71
GNE-202ENST00000396594 KRTAP2-2Q9BYT5 123 aa4.35□□□□□ -1.71
GNE-202ENST00000396594 RNF213Q63HN8 5207 aa4.35□□□□□ -1.71
GNE-202ENST00000396594 LCE1BQ5T7P3 118 aa4.33□□□□□ -1.72
GNE-202ENST00000396594 KRTAP4-3Q9BYR4 195 aa4.32□□□□□ -1.72
GNE-202ENST00000396594 LPAP08519 4548 aa4.31□□□□□ -1.72
GNE-202ENST00000396594 HMCN2Q8NDA2 5059 aa4.28□□□□□ -1.72
GNE-202ENST00000396594 FAT4Q6V0I7 4981 aa4.25□□□□□ -1.73
GNE-202ENST00000396594 KRTAP4-12Q9BQ66 201 aa4.24□□□□□ -1.73
GNE-202ENST00000396594 KRTAP9-9Q9BYP9 154 aa4.22□□□□□ -1.73
GNE-202ENST00000396594 KRTAP6-1Q3LI64 71 aa4.16□□□□□ -1.74
GNE-202ENST00000396594 KRTAP6-2Q3LI66 62 aa4.11□□□□□ -1.75
GNE-202ENST00000396594 KRTAP5-9P26371 169 aa4.01□□□□□ -1.77
GNE-202ENST00000396594 KRTAP9-6A8MVA2 160 aa3.98□□□□□ -1.77
GNE-202ENST00000396594 UBR4Q5T4S7 5183 aa3.94□□□□□ -1.78
GNE-202ENST00000396594 KRTAP4-9Q9BYQ8 210 aa3.92□□□□□ -1.78
GNE-202ENST00000396594 KRTAP4-2Q9BYR5 136 aa3.79□□□□□ -1.8
GNE-202ENST00000396594 SYNE2Q8WXH0 6885 aaKnown RBP3.77□□□□□ -1.81
GNE-202ENST00000396594 LCE1CQ5T751 118 aa3.72□□□□□ -1.81
GNE-202ENST00000396594 LCE1EQ5T753 118 aa3.72□□□□□ -1.81
GNE-202ENST00000396594 LCE1FQ5T754 118 aa3.72□□□□□ -1.81
GNE-202ENST00000396594 FSIP2Q5CZC0 6907 aa3.69□□□□□ -1.82
GNE-202ENST00000396594 SYNE1Q8NF91 8797 aaKnown RBP3.69□□□□□ -1.82
GNE-202ENST00000396594 KRTAP4-11Q9BYQ6 195 aa3.64□□□□□ -1.83
GNE-202ENST00000396594 KRTAP20-2Q3LI61 65 aa3.6□□□□□ -1.83
GNE-202ENST00000396594 MUC2Q02817 5179 aa3.59□□□□□ -1.83
GNE-202ENST00000396594 KRTAP5-4Q6L8H1 288 aa3.58□□□□□ -1.84
GNE-202ENST00000396594 OBSCNQ5VST9 7968 aa3.55□□□□□ -1.84
GNE-202ENST00000396594 SSPOA2VEC9 5147 aa3.54□□□□□ -1.84
GNE-202ENST00000396594 NEBP20929 6669 aa3.52□□□□□ -1.85
GNE-202ENST00000396594 GPR98Q8WXG9 6306 aa3.49□□□□□ -1.85
GNE-202ENST00000396594 USH2AO75445 5202 aa3.43□□□□□ -1.86
GNE-202ENST00000396594 KRTAP5-3Q6L8H2 238 aa3.29□□□□□ -1.88
GNE-202ENST00000396594 KMT2DO14686 5537 aa3.29□□□□□ -1.88
GNE-202ENST00000396594 KRTAP5-5Q701N2 237 aaPredicted RBP3.28□□□□□ -1.88
GNE-202ENST00000396594 MUC12Q9UKN1 5478 aa3.14□□□□□ -1.91
GNE-202ENST00000396594 FCGBPQ9Y6R7 5405 aaPredicted RBP3.09□□□□□ -1.91
GNE-202ENST00000396594 MACF1Q9UPN3 7388 aaKnown RBP3.03□□□□□ -1.93
GNE-202ENST00000396594 MDN1Q9NU22 5596 aa3□□□□□ -1.93
GNE-202ENST00000396594 DSTQ03001 7570 aaKnown RBP2.98□□□□□ -1.93
GNE-202ENST00000396594 KRTAP5-2Q701N4 177 aa2.81□□□□□ -1.96
GNE-202ENST00000396594 AHNAK2Q8IVF2 5795 aa2.81□□□□□ -1.96
GNE-202ENST00000396594 MUC5ACP98088 5654 aa2.79□□□□□ -1.96
GNE-202ENST00000396594 KRTAP4-4Q9BYR3 166 aa2.74□□□□□ -1.97
GNE-202ENST00000396594 HMCN1Q96RW7 5635 aa2.63□□□□□ -1.99
GNE-202ENST00000396594 MUC19Q7Z5P9 8384 aa2.62□□□□□ -1.99
GNE-202ENST00000396594 KRTAP5-8O75690 187 aa2.62□□□□□ -1.99
GNE-202ENST00000396594 KRTAP5-11Q6L8G4 156 aa2.61□□□□□ -1.99
GNE-202ENST00000396594 AHNAKQ09666 5890 aaKnown RBP2.61□□□□□ -1.99
GNE-202ENST00000396594 KRTAP5-10Q6L8G5 202 aa2.57□□□□□ -2
GNE-202ENST00000396594 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.43□□□□□ -2.02
GNE-202ENST00000396594 MUC5BQ9HC84 5762 aaPredicted RBP2.37□□□□□ -2.03
GNE-202ENST00000396594 PHGR1C9JFL3 82 aa2.31□□□□□ -2.04
GNE-202ENST00000396594 KRTAP5-1Q6L8H4 278 aa2.3□□□□□ -2.04
GNE-202ENST00000396594 KRTAP21-2Q3LI59 83 aa2.19□□□□□ -2.06
GNE-202ENST00000396594 KRTAP5-7Q6L8G8 165 aa2.17□□□□□ -2.06
GNE-202ENST00000396594 KRTAP21-1Q3LI58 79 aa2.06□□□□□ -2.08
GNE-202ENST00000396594 MUC16Q8WXI7 14507 aa1.47□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 95.1 ms