RNA–Protein interactions for RNA: ENST00000394196.8

CHD2-201, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD2, Length 9,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-201ENST00000394196 SYNE1Q8NF91 8797 aaKnown RBP2.33□□□□□ -2.04
CHD2-201ENST00000394196 KRTAP19-2Q3LHN2 52 aa2.33□□□□□ -2.04
CHD2-201ENST00000394196 LRP2P98164 4655 aa2.32□□□□□ -2.04
CHD2-201ENST00000394196 LCE1AQ5T7P2 110 aa2.32□□□□□ -2.04
CHD2-201ENST00000394196 MUC17Q685J3 4493 aa2.32□□□□□ -2.04
CHD2-201ENST00000394196 RYR3Q15413 4870 aa2.32□□□□□ -2.04
CHD2-201ENST00000394196 KRTAP9-4Q9BYQ2 154 aa2.31□□□□□ -2.04
CHD2-201ENST00000394196 KMT2CQ8NEZ4 4911 aaKnown RBP2.31□□□□□ -2.04
CHD2-201ENST00000394196 KRTAP9-6A0A140TA67 174 aa2.3□□□□□ -2.04
CHD2-201ENST00000394196 KRTAP9-2Q9BYQ4 174 aa2.3□□□□□ -2.04
CHD2-201ENST00000394196 KRTAP4-3Q9BYR4 195 aa2.3□□□□□ -2.04
CHD2-201ENST00000394196 KRTAP4-9Q9BYQ8 210 aa2.29□□□□□ -2.04
CHD2-201ENST00000394196 RYR2Q92736 4967 aa2.28□□□□□ -2.04
CHD2-201ENST00000394196 LCE2AQ5TA79 106 aaPredicted RBP2.24□□□□□ -2.05
CHD2-201ENST00000394196 LCE4AQ5TA78 99 aa2.24□□□□□ -2.05
CHD2-201ENST00000394196 KRTAP20-1Q3LI63 56 aa2.24□□□□□ -2.05
CHD2-201ENST00000394196 KRTAP9-7A8MTY7 169 aa2.23□□□□□ -2.05
CHD2-201ENST00000394196 KRTAP6-1Q3LI64 71 aa2.22□□□□□ -2.05
CHD2-201ENST00000394196 EPPK1P58107 5090 aaKnown RBP2.2□□□□□ -2.06
CHD2-201ENST00000394196 KRTAP9-6A8MVA2 160 aa2.2□□□□□ -2.06
CHD2-201ENST00000394196 LCE1CQ5T751 118 aa2.18□□□□□ -2.06
CHD2-201ENST00000394196 LCE1EQ5T753 118 aa2.18□□□□□ -2.06
CHD2-201ENST00000394196 LCE1FQ5T754 118 aa2.18□□□□□ -2.06
CHD2-201ENST00000394196 HERC2O95714 4834 aa2.15□□□□□ -2.07
CHD2-201ENST00000394196 ABCA13Q86UQ4 5058 aa2.14□□□□□ -2.07
CHD2-201ENST00000394196 SYNE2Q8WXH0 6885 aaKnown RBP2.14□□□□□ -2.07
CHD2-201ENST00000394196 PCLOQ9Y6V0 5065 aa2.13□□□□□ -2.07
CHD2-201ENST00000394196 KRTAP6-3Q3LI67 103 aa2.08□□□□□ -2.08
CHD2-201ENST00000394196 KIAA1109Q2LD37 5005 aa2.06□□□□□ -2.08
CHD2-201ENST00000394196 MUC2Q02817 5179 aa2.04□□□□□ -2.08
CHD2-201ENST00000394196 OBSCNQ5VST9 7968 aa2.03□□□□□ -2.08
CHD2-201ENST00000394196 BIRC6Q9NR09 4857 aa2.03□□□□□ -2.08
CHD2-201ENST00000394196 HERC1Q15751 4861 aa2.02□□□□□ -2.09
CHD2-201ENST00000394196 KRTAP9-9Q9BYP9 154 aa2.01□□□□□ -2.09
CHD2-201ENST00000394196 HMCN2Q8NDA2 5059 aa2□□□□□ -2.09
CHD2-201ENST00000394196 KRTAP4-11Q9BYQ6 195 aa2□□□□□ -2.09
CHD2-201ENST00000394196 FAT4Q6V0I7 4981 aa1.97□□□□□ -2.09
CHD2-201ENST00000394196 UBR4Q5T4S7 5183 aa1.9□□□□□ -2.11
CHD2-201ENST00000394196 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.9□□□□□ -2.11
CHD2-201ENST00000394196 FSIP2Q5CZC0 6907 aa1.82□□□□□ -2.12
CHD2-201ENST00000394196 RNF213Q63HN8 5207 aa1.8□□□□□ -2.12
CHD2-201ENST00000394196 KMT2DO14686 5537 aa1.77□□□□□ -2.13
CHD2-201ENST00000394196 KRTAP5-5Q701N2 237 aaPredicted RBP1.74□□□□□ -2.13
CHD2-201ENST00000394196 KRTAP20-2Q3LI61 65 aa1.74□□□□□ -2.13
CHD2-201ENST00000394196 USH2AO75445 5202 aa1.68□□□□□ -2.14
CHD2-201ENST00000394196 KRTAP5-9P26371 169 aa1.68□□□□□ -2.14
CHD2-201ENST00000394196 DSTQ03001 7570 aaKnown RBP1.68□□□□□ -2.14
CHD2-201ENST00000394196 MUC19Q7Z5P9 8384 aa1.65□□□□□ -2.15
CHD2-201ENST00000394196 MUC12Q9UKN1 5478 aa1.65□□□□□ -2.15
CHD2-201ENST00000394196 GPR98Q8WXG9 6306 aa1.63□□□□□ -2.15
CHD2-201ENST00000394196 MDN1Q9NU22 5596 aa1.61□□□□□ -2.15
CHD2-201ENST00000394196 KRTAP5-4Q6L8H1 288 aa1.6□□□□□ -2.15
CHD2-201ENST00000394196 FCGBPQ9Y6R7 5405 aaPredicted RBP1.6□□□□□ -2.15
CHD2-201ENST00000394196 KRTAP4-4Q9BYR3 166 aa1.58□□□□□ -2.16
CHD2-201ENST00000394196 KRTAP4-6Q9BYQ5 205 aa1.58□□□□□ -2.16
CHD2-201ENST00000394196 MACF1Q9UPN3 7388 aaKnown RBP1.56□□□□□ -2.16
CHD2-201ENST00000394196 SSPOA2VEC9 5147 aa1.55□□□□□ -2.16
CHD2-201ENST00000394196 KRTAP4-12Q9BQ66 201 aa1.46□□□□□ -2.18
CHD2-201ENST00000394196 KRTAP4-2Q9BYR5 136 aa1.46□□□□□ -2.18
CHD2-201ENST00000394196 NEBP20929 6669 aa1.43□□□□□ -2.18
CHD2-201ENST00000394196 KRTAP5-10Q6L8G5 202 aa1.42□□□□□ -2.18
CHD2-201ENST00000394196 KRTAP5-3Q6L8H2 238 aa1.38□□□□□ -2.19
CHD2-201ENST00000394196 MUC5ACP98088 5654 aa1.36□□□□□ -2.19
CHD2-201ENST00000394196 AHNAK2Q8IVF2 5795 aa1.34□□□□□ -2.2
CHD2-201ENST00000394196 HMCN1Q96RW7 5635 aa1.32□□□□□ -2.2
CHD2-201ENST00000394196 KRTAP21-1Q3LI58 79 aa1.31□□□□□ -2.2
CHD2-201ENST00000394196 KRTAP5-2Q701N4 177 aa1.28□□□□□ -2.2
CHD2-201ENST00000394196 AHNAKQ09666 5890 aaKnown RBP1.27□□□□□ -2.21
CHD2-201ENST00000394196 MUC5BQ9HC84 5762 aaPredicted RBP1.25□□□□□ -2.21
CHD2-201ENST00000394196 PHGR1C9JFL3 82 aa1.25□□□□□ -2.21
CHD2-201ENST00000394196 KRTAP5-1Q6L8H4 278 aa1.23□□□□□ -2.21
CHD2-201ENST00000394196 KRTAP5-11Q6L8G4 156 aa1.21□□□□□ -2.22
CHD2-201ENST00000394196 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.14□□□□□ -2.23
CHD2-201ENST00000394196 KRTAP5-8O75690 187 aa1.13□□□□□ -2.23
CHD2-201ENST00000394196 KRTAP21-2Q3LI59 83 aa1.08□□□□□ -2.24
CHD2-201ENST00000394196 KRTAP5-7Q6L8G8 165 aa1□□□□□ -2.25
CHD2-201ENST00000394196 MUC16Q8WXI7 14507 aa0.89□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 378.4 ms