RNA–Protein interactions for RNA: ENST00000393693.6

SNCB-202, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-202ENST00000393693 KRTAP25-1Q3LHN0 102 aa7.36□□□□□ -1.23
SNCB-202ENST00000393693 TNP1P09430 55 aa7.35□□□□□ -1.23
SNCB-202ENST00000393693 GPR98Q8WXG9 6306 aa7.23□□□□□ -1.25
SNCB-202ENST00000393693 PRAC1Q96KF2 57 aa7.23□□□□□ -1.25
SNCB-202ENST00000393693 DSTQ03001 7570 aaKnown RBP7.13□□□□□ -1.27
SNCB-202ENST00000393693 KRTAP23-1A1A580 65 aa7.12□□□□□ -1.27
SNCB-202ENST00000393693 PP632Q6XCG6 107 aa7.12□□□□□ -1.27
SNCB-202ENST00000393693 SVIPQ8NHG7 77 aa7.11□□□□□ -1.27
SNCB-202ENST00000393693 KRTAP4-9Q9BYQ8 210 aa7.1□□□□□ -1.27
SNCB-202ENST00000393693 LCE5AQ5TCM9 118 aa7.01□□□□□ -1.29
SNCB-202ENST00000393693 KRTAP19-7Q3SYF9 63 aa6.98□□□□□ -1.29
SNCB-202ENST00000393693 LCE3AQ5TA76 89 aa6.96□□□□□ -1.3
SNCB-202ENST00000393693 KRTAP19-3Q7Z4W3 81 aa6.94□□□□□ -1.3
SNCB-202ENST00000393693 MT1EP04732 61 aa6.93□□□□□ -1.3
SNCB-202ENST00000393693 LCE1DQ5T752 114 aa6.86□□□□□ -1.31
SNCB-202ENST00000393693 HMCN1Q96RW7 5635 aa6.75□□□□□ -1.33
SNCB-202ENST00000393693 MT4P47944 62 aa6.74□□□□□ -1.33
SNCB-202ENST00000393693 MT1GP13640 62 aa6.72□□□□□ -1.33
SNCB-202ENST00000393693 KRTAP12-3P60328 96 aa6.72□□□□□ -1.33
SNCB-202ENST00000393693 KRTAP19-5Q3LI72 72 aa6.71□□□□□ -1.34
SNCB-202ENST00000393693 LCE4AQ5TA78 99 aa6.7□□□□□ -1.34
SNCB-202ENST00000393693 MT1MQ8N339 61 aa6.63□□□□□ -1.35
SNCB-202ENST00000393693 AHNAK2Q8IVF2 5795 aa6.63□□□□□ -1.35
SNCB-202ENST00000393693 KRTAP15-1Q3LI76 137 aa6.58□□□□□ -1.36
SNCB-202ENST00000393693 MT1LQ93083 61 aa6.56□□□□□ -1.36
SNCB-202ENST00000393693 KRTAP5-10Q6L8G5 202 aa6.55□□□□□ -1.36
SNCB-202ENST00000393693 KRTAP4-3Q9BYR4 195 aa6.55□□□□□ -1.36
SNCB-202ENST00000393693 KRTAP5-4Q6L8H1 288 aa6.52□□□□□ -1.37
SNCB-202ENST00000393693 KRTAP4-6Q9BYQ5 205 aa6.52□□□□□ -1.37
SNCB-202ENST00000393693 KRTAP19-4Q3LI73 84 aa6.44□□□□□ -1.38
SNCB-202ENST00000393693 KRTAP5-7Q6L8G8 165 aa6.33□□□□□ -1.4
SNCB-202ENST00000393693 KRTAP5-3Q6L8H2 238 aa6.32□□□□□ -1.4
SNCB-202ENST00000393693 KRTAP4-7Q9BYR0 210 aa6.29□□□□□ -1.4
SNCB-202ENST00000393693 LCE3CQ5T5A8 94 aa6.27□□□□□ -1.41
SNCB-202ENST00000393693 KRTAP20-2Q3LI61 65 aa6.2□□□□□ -1.42
SNCB-202ENST00000393693 SPRR5A0A1B0GTR4 108 aa6.18□□□□□ -1.42
SNCB-202ENST00000393693 KRTAP5-5Q701N2 237 aaPredicted RBP6.11□□□□□ -1.43
SNCB-202ENST00000393693 LUZP6Q538Z0 58 aa6.06□□□□□ -1.44
SNCB-202ENST00000393693 KRTAP12-4P60329 112 aa6.01□□□□□ -1.45
SNCB-202ENST00000393693 SYNE1Q8NF91 8797 aaKnown RBP6.01□□□□□ -1.45
SNCB-202ENST00000393693 LOC100996750A0A140TA64 210 aa5.97□□□□□ -1.45
SNCB-202ENST00000393693 KRTAP9-6A8MVA2 160 aa5.82□□□□□ -1.48
SNCB-202ENST00000393693 NDUFAF8A1L188 74 aa5.75□□□□□ -1.49
SNCB-202ENST00000393693 KRTAP4-11Q9BYQ6 195 aa5.75□□□□□ -1.49
SNCB-202ENST00000393693 KRTAP5-2Q701N4 177 aa5.65□□□□□ -1.5
SNCB-202ENST00000393693 KRTAP6-1Q3LI64 71 aa5.59□□□□□ -1.51
SNCB-202ENST00000393693 KRTAP5-8O75690 187 aa5.58□□□□□ -1.52
SNCB-202ENST00000393693 MT1AP04731 61 aa5.56□□□□□ -1.52
SNCB-202ENST00000393693 AHNAKQ09666 5890 aaKnown RBP5.54□□□□□ -1.52
SNCB-202ENST00000393693 MUC5BQ9HC84 5762 aaPredicted RBP5.53□□□□□ -1.52
SNCB-202ENST00000393693 MUC5ACP98088 5654 aa5.5□□□□□ -1.53
SNCB-202ENST00000393693 KRTAP9-4Q9BYQ2 154 aa5.43□□□□□ -1.54
SNCB-202ENST00000393693 KRTAP6-2Q3LI66 62 aa5.41□□□□□ -1.54
SNCB-202ENST00000393693 OBSCNQ5VST9 7968 aa5.41□□□□□ -1.54
SNCB-202ENST00000393693 KRTAP9-9Q9BYP9 154 aa5.33□□□□□ -1.56
SNCB-202ENST00000393693 A0A0A0MQY5 61 aa5.15□□□□□ -1.59
SNCB-202ENST00000393693 KRTAP5-1Q6L8H4 278 aa5.15□□□□□ -1.59
SNCB-202ENST00000393693 MT3P25713 68 aa5.09□□□□□ -1.59
SNCB-202ENST00000393693 H3BS24 57 aa4.88□□□□□ -1.63
SNCB-202ENST00000393693 INE1O15225 51 aa4.84□□□□□ -1.63
SNCB-202ENST00000393693 LCE1EQ5T753 118 aa4.74□□□□□ -1.65
SNCB-202ENST00000393693 LCE3DQ9BYE3 92 aa4.71□□□□□ -1.66
SNCB-202ENST00000393693 LCE3EQ5T5B0 92 aa4.59□□□□□ -1.67
SNCB-202ENST00000393693 LCE1BQ5T7P3 118 aa4.57□□□□□ -1.68
SNCB-202ENST00000393693 KRTAP4-2Q9BYR5 136 aa4.57□□□□□ -1.68
SNCB-202ENST00000393693 LCE1CQ5T751 118 aa4.42□□□□□ -1.7
SNCB-202ENST00000393693 KRTAP4-12Q9BQ66 201 aa4.33□□□□□ -1.72
SNCB-202ENST00000393693 KRTAP5-11Q6L8G4 156 aa4.04□□□□□ -1.76
SNCB-202ENST00000393693 LCE1FQ5T754 118 aa3.99□□□□□ -1.77
SNCB-202ENST00000393693 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.96□□□□□ -1.78
SNCB-202ENST00000393693 PRM1P04553 51 aa3.92□□□□□ -1.78
SNCB-202ENST00000393693 PHGR1C9JFL3 82 aa3.84□□□□□ -1.79
SNCB-202ENST00000393693 KRTAP21-2Q3LI59 83 aa3.68□□□□□ -1.82
SNCB-202ENST00000393693 KRTAP4-4Q9BYR3 166 aa3.48□□□□□ -1.85
SNCB-202ENST00000393693 MUC19Q7Z5P9 8384 aa3.35□□□□□ -1.87
SNCB-202ENST00000393693 KRTAP21-1Q3LI58 79 aa2.88□□□□□ -1.95
SNCB-202ENST00000393693 MUC16Q8WXI7 14507 aa2.36□□□□□ -2.03
Retrieved 77 of 20,778 RNA–protein pairs in 256.7 ms