RNA–Protein interactions for RNA: ENST00000393272.7

NPHP1-203, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 2,752 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-203ENST00000393272 LCE3CQ5T5A8 94 aa2.64□□□□□ -1.99
NPHP1-203ENST00000393272 KRTAP4-11Q9BYQ6 195 aa2.64□□□□□ -1.99
NPHP1-203ENST00000393272 RNF213Q63HN8 5207 aa2.62□□□□□ -1.99
NPHP1-203ENST00000393272 KRTAP9-6A8MVA2 160 aa2.62□□□□□ -1.99
NPHP1-203ENST00000393272 MT1HP80294 61 aa2.61□□□□□ -1.99
NPHP1-203ENST00000393272 KRTAP9-3Q9BYQ3 159 aa2.6□□□□□ -1.99
NPHP1-203ENST00000393272 KRTAP19-5Q3LI72 72 aa2.59□□□□□ -1.99
NPHP1-203ENST00000393272 KRTAP2-3P0C7H8 128 aa2.58□□□□□ -2
NPHP1-203ENST00000393272 KRTAP2-4Q9BYR9 128 aa2.58□□□□□ -2
NPHP1-203ENST00000393272 KRTAP2-1Q9BYU5 128 aa2.58□□□□□ -2
NPHP1-203ENST00000393272 KMT2DO14686 5537 aa2.56□□□□□ -2
NPHP1-203ENST00000393272 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.54□□□□□ -2
NPHP1-203ENST00000393272 LCE5AQ5TCM9 118 aa2.5□□□□□ -2.01
NPHP1-203ENST00000393272 KRTAP5-9P26371 169 aa2.49□□□□□ -2.01
NPHP1-203ENST00000393272 USH2AO75445 5202 aa2.43□□□□□ -2.02
NPHP1-203ENST00000393272 KRTAP19-7Q3SYF9 63 aa2.41□□□□□ -2.02
NPHP1-203ENST00000393272 KRTAP12-4P60329 112 aa2.37□□□□□ -2.03
NPHP1-203ENST00000393272 MT1LQ93083 61 aa2.35□□□□□ -2.03
NPHP1-203ENST00000393272 MT1EP04732 61 aa2.3□□□□□ -2.04
NPHP1-203ENST00000393272 KRTAP4-3Q9BYR4 195 aa2.26□□□□□ -2.05
NPHP1-203ENST00000393272 MT1GP13640 62 aa2.24□□□□□ -2.05
NPHP1-203ENST00000393272 CRCT1Q9UGL9 99 aa2.22□□□□□ -2.05
NPHP1-203ENST00000393272 GPR98Q8WXG9 6306 aa2.21□□□□□ -2.06
NPHP1-203ENST00000393272 LCE1AQ5T7P2 110 aa2.19□□□□□ -2.06
NPHP1-203ENST00000393272 KRTAP5-4Q6L8H1 288 aa2.18□□□□□ -2.06
NPHP1-203ENST00000393272 DSTQ03001 7570 aaKnown RBP2.16□□□□□ -2.06
NPHP1-203ENST00000393272 MUC12Q9UKN1 5478 aa2.15□□□□□ -2.07
NPHP1-203ENST00000393272 PRM1P04553 51 aa2.14□□□□□ -2.07
NPHP1-203ENST00000393272 FCGBPQ9Y6R7 5405 aaPredicted RBP2.14□□□□□ -2.07
NPHP1-203ENST00000393272 SYNE1Q8NF91 8797 aaKnown RBP2.13□□□□□ -2.07
NPHP1-203ENST00000393272 MT1MQ8N339 61 aa2.13□□□□□ -2.07
NPHP1-203ENST00000393272 SSPOA2VEC9 5147 aa2.12□□□□□ -2.07
NPHP1-203ENST00000393272 KRTAP5-5Q701N2 237 aaPredicted RBP2.11□□□□□ -2.07
NPHP1-203ENST00000393272 MUC5BQ9HC84 5762 aaPredicted RBP2.09□□□□□ -2.07
NPHP1-203ENST00000393272 MT1AP04731 61 aa2.08□□□□□ -2.08
NPHP1-203ENST00000393272 KRTAP6-3Q3LI67 103 aa2.08□□□□□ -2.08
NPHP1-203ENST00000393272 KRTAP19-3Q7Z4W3 81 aa2.08□□□□□ -2.08
NPHP1-203ENST00000393272 LCE3DQ9BYE3 92 aa2.08□□□□□ -2.08
NPHP1-203ENST00000393272 LCE3EQ5T5B0 92 aa2.07□□□□□ -2.08
NPHP1-203ENST00000393272 FSIP2Q5CZC0 6907 aa2.04□□□□□ -2.08
NPHP1-203ENST00000393272 KRTAP2-2Q9BYT5 123 aa2.03□□□□□ -2.08
NPHP1-203ENST00000393272 KRTAP6-1Q3LI64 71 aa2.02□□□□□ -2.09
NPHP1-203ENST00000393272 KRTAP5-8O75690 187 aa2.01□□□□□ -2.09
NPHP1-203ENST00000393272 MT3P25713 68 aa2□□□□□ -2.09
NPHP1-203ENST00000393272 KRTAP6-2Q3LI66 62 aa1.98□□□□□ -2.09
NPHP1-203ENST00000393272 KRTAP20-1Q3LI63 56 aa1.98□□□□□ -2.09
NPHP1-203ENST00000393272 LCE1FQ5T754 118 aa1.98□□□□□ -2.09
NPHP1-203ENST00000393272 KRTAP5-2Q701N4 177 aa1.98□□□□□ -2.09
NPHP1-203ENST00000393272 OBSCNQ5VST9 7968 aa1.96□□□□□ -2.09
NPHP1-203ENST00000393272 KRTAP19-6Q3LI70 58 aa1.96□□□□□ -2.1
NPHP1-203ENST00000393272 SYNE2Q8WXH0 6885 aaKnown RBP1.94□□□□□ -2.1
NPHP1-203ENST00000393272 SPRR2FQ96RM1 72 aa1.91□□□□□ -2.1
NPHP1-203ENST00000393272 KRTAP4-4Q9BYR3 166 aa1.9□□□□□ -2.11
NPHP1-203ENST00000393272 LCE1EQ5T753 118 aa1.87□□□□□ -2.11
NPHP1-203ENST00000393272 KRTAP5-1Q6L8H4 278 aa1.82□□□□□ -2.12
NPHP1-203ENST00000393272 MDN1Q9NU22 5596 aa1.82□□□□□ -2.12
NPHP1-203ENST00000393272 AHNAKQ09666 5890 aaKnown RBP1.82□□□□□ -2.12
NPHP1-203ENST00000393272 MACF1Q9UPN3 7388 aaKnown RBP1.8□□□□□ -2.12
NPHP1-203ENST00000393272 NEBP20929 6669 aa1.8□□□□□ -2.12
NPHP1-203ENST00000393272 KRTAP5-7Q6L8G8 165 aa1.77□□□□□ -2.13
NPHP1-203ENST00000393272 SPRR2AP35326 72 aa1.75□□□□□ -2.13
NPHP1-203ENST00000393272 SPRR2EP22531 72 aa1.73□□□□□ -2.13
NPHP1-203ENST00000393272 SPRR2DP22532 72 aa1.65□□□□□ -2.14
NPHP1-203ENST00000393272 SPRR2BP35325 72 aa1.65□□□□□ -2.15
NPHP1-203ENST00000393272 KRTAP5-11Q6L8G4 156 aa1.63□□□□□ -2.15
NPHP1-203ENST00000393272 KRTAP5-10Q6L8G5 202 aa1.57□□□□□ -2.16
NPHP1-203ENST00000393272 MUC5ACP98088 5654 aa1.57□□□□□ -2.16
NPHP1-203ENST00000393272 AHNAK2Q8IVF2 5795 aa1.53□□□□□ -2.16
NPHP1-203ENST00000393272 MUC19Q7Z5P9 8384 aa1.43□□□□□ -2.18
NPHP1-203ENST00000393272 LCE1BQ5T7P3 118 aa1.4□□□□□ -2.19
NPHP1-203ENST00000393272 MT4P47944 62 aa1.39□□□□□ -2.19
NPHP1-203ENST00000393272 KRTAP20-2Q3LI61 65 aa1.38□□□□□ -2.19
NPHP1-203ENST00000393272 KRTAP21-1Q3LI58 79 aa1.36□□□□□ -2.19
NPHP1-203ENST00000393272 KRTAP21-2Q3LI59 83 aa1.28□□□□□ -2.2
NPHP1-203ENST00000393272 LCE1CQ5T751 118 aa1.27□□□□□ -2.21
NPHP1-203ENST00000393272 PHGR1C9JFL3 82 aa0.92□□□□□ -2.26
NPHP1-203ENST00000393272 MUC16Q8WXI7 14507 aa0.66□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 78.5 ms