RNA–Protein interactions for RNA: ENST00000390497.1

TRAJ40-201, Transcript of T cell receptor alpha joining 40, humanhuman

APPRIS P1 BASIC

Gene TRAJ40, Length 61 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ40-201ENST00000390497 CFAP54Q96N23 3096 aa-1.54□□□□□ -2.66
TRAJ40-201ENST00000390497 FREM2Q5SZK8 3169 aa-1.56□□□□□ -2.66
TRAJ40-201ENST00000390497 SNRPGP15A8MWD9 76 aa-1.57□□□□□ -2.66
TRAJ40-201ENST00000390497 ATMQ13315 3056 aa-1.58□□□□□ -2.66
TRAJ40-201ENST00000390497 RPS29P62273 56 aaKnown RBP-1.58□□□□□ -2.66
TRAJ40-201ENST00000390497 ABCA13Q86UQ4 5058 aa-1.62□□□□□ -2.67
TRAJ40-201ENST00000390497 FRYLO94915 3013 aa-1.63□□□□□ -2.67
TRAJ40-201ENST00000390497 IQGAP2Q13576 1575 aa-1.65□□□□□ -2.67
TRAJ40-201ENST00000390497 TOMM7Q9P0U1 55 aa-1.69□□□□□ -2.68
TRAJ40-201ENST00000390497 CEP250Q9BV73 2442 aa-1.7□□□□□ -2.68
TRAJ40-201ENST00000390497 PCNTO95613 3336 aa-1.7□□□□□ -2.68
TRAJ40-201ENST00000390497 SAMD9LQ8IVG5 1584 aa-1.7□□□□□ -2.68
TRAJ40-201ENST00000390497 WDFY3Q8IZQ1 3526 aa-1.7□□□□□ -2.68
TRAJ40-201ENST00000390497 BOD1L1Q8NFC6 3051 aa-1.72□□□□□ -2.68
TRAJ40-201ENST00000390497 LINC01590Q5TEZ4 76 aa-1.72□□□□□ -2.68
TRAJ40-201ENST00000390497 ATP7AQ04656 1500 aa-1.75□□□□□ -2.69
TRAJ40-201ENST00000390497 SZT2Q5T011 3432 aa-1.77□□□□□ -2.69
TRAJ40-201ENST00000390497 DMDP11532 3685 aa-1.77□□□□□ -2.69
TRAJ40-201ENST00000390497 RHPN1-AS1Q9BWJ2 59 aa-1.78□□□□□ -2.69
TRAJ40-201ENST00000390497 WDFY4Q6ZS81 3184 aa-1.79□□□□□ -2.7
TRAJ40-201ENST00000390497 DUOX1Q9NRD9 1551 aa-1.8□□□□□ -2.7
TRAJ40-201ENST00000390497 MT1FP04733 61 aa-1.8□□□□□ -2.7
TRAJ40-201ENST00000390497 TOMM5Q8N4H5 51 aa-1.81□□□□□ -2.7
TRAJ40-201ENST00000390497 SPEGQ15772 3267 aa-1.81□□□□□ -2.7
TRAJ40-201ENST00000390497 CEP350Q5VT06 3117 aa-1.81□□□□□ -2.7
TRAJ40-201ENST00000390497 KRTAP20-1Q3LI63 56 aa-1.83□□□□□ -2.7
TRAJ40-201ENST00000390497 RPL39P62891 51 aaKnown RBP-1.86□□□□□ -2.71
TRAJ40-201ENST00000390497 MUC3AQ02505 3323 aa-1.87□□□□□ -2.71
TRAJ40-201ENST00000390497 MROH2BQ7Z745 1585 aa-1.89□□□□□ -2.71
TRAJ40-201ENST00000390497 TOP2AP11388 1531 aaKnown RBP-1.91□□□□□ -2.71
TRAJ40-201ENST00000390497 DEFB133Q30KQ1 61 aa-1.91□□□□□ -2.72
TRAJ40-201ENST00000390497 EP400Q96L91 3159 aa-1.95□□□□□ -2.72
TRAJ40-201ENST00000390497 XIRP2A4UGR9 3374 aa-1.96□□□□□ -2.72
TRAJ40-201ENST00000390497 RPL39LQ96EH5 51 aaKnown RBP-1.97□□□□□ -2.72
TRAJ40-201ENST00000390497 HTN1P15515 57 aa-2□□□□□ -2.73
TRAJ40-201ENST00000390497 DCHS1Q96JQ0 3298 aa-2.01□□□□□ -2.73
TRAJ40-201ENST00000390497 CENPEQ02224 2701 aa-2.01□□□□□ -2.73
TRAJ40-201ENST00000390497 A0A096LNI7 61 aa-2.02□□□□□ -2.73
TRAJ40-201ENST00000390497 DEFB124Q8NES8 71 aa-2.02□□□□□ -2.73
TRAJ40-201ENST00000390497 TTTY10Q9BZA0 68 aa-2.02□□□□□ -2.73
TRAJ40-201ENST00000390497 CD52P31358 61 aa-2.03□□□□□ -2.73
TRAJ40-201ENST00000390497 DNAH12Q6ZR08 3092 aa-2.04□□□□□ -2.74
TRAJ40-201ENST00000390497 MKI67P46013 3256 aaKnown RBP-2.06□□□□□ -2.74
TRAJ40-201ENST00000390497 LOC400499M0QZD8 3231 aa-2.15□□□□□ -2.75
TRAJ40-201ENST00000390497 USP34Q70CQ2 3546 aa-2.17□□□□□ -2.76
TRAJ40-201ENST00000390497 H3BUX3 64 aa-2.2□□□□□ -2.76
TRAJ40-201ENST00000390497 KRTAP19-6Q3LI70 58 aa-2.21□□□□□ -2.76
TRAJ40-201ENST00000390497 ASPMQ8IZT6 3477 aa-2.22□□□□□ -2.76
TRAJ40-201ENST00000390497 DEFB104AQ8WTQ1 72 aa-2.22□□□□□ -2.76
TRAJ40-201ENST00000390497 CFAP47Q6ZTR5 3102 aa-2.22□□□□□ -2.77
TRAJ40-201ENST00000390497 UNC80Q8N2C7 3258 aa-2.24□□□□□ -2.77
TRAJ40-201ENST00000390497 DNAH14Q0VDD8 3507 aa-2.25□□□□□ -2.77
TRAJ40-201ENST00000390497 GCC2Q8IWJ2 1684 aa-2.29□□□□□ -2.78
TRAJ40-201ENST00000390497 BRCA2P51587 3418 aa-2.32□□□□□ -2.78
TRAJ40-201ENST00000390497 K7EIM0 57 aa-2.33□□□□□ -2.78
TRAJ40-201ENST00000390497 SNRPGP62308 76 aaKnown RBP-2.37□□□□□ -2.79
TRAJ40-201ENST00000390497 KRTAP19-2Q3LHN2 52 aa-2.37□□□□□ -2.79
TRAJ40-201ENST00000390497 LINC01556Q5JQF7 62 aa-2.42□□□□□ -2.8
TRAJ40-201ENST00000390497 ARHGAP5-AS1Q96IT6 56 aa-2.43□□□□□ -2.8
TRAJ40-201ENST00000390497 VCANP13611 3396 aa-2.44□□□□□ -2.8
TRAJ40-201ENST00000390497 PRCDQ00LT1 54 aa-2.45□□□□□ -2.8
TRAJ40-201ENST00000390497 CENPFP49454 3210 aa-2.53□□□□□ -2.81
TRAJ40-201ENST00000390497 CDH23Q9H251 3354 aa-2.55□□□□□ -2.82
TRAJ40-201ENST00000390497 VPS13AQ96RL7 3174 aa-2.63□□□□□ -2.83
TRAJ40-201ENST00000390497 TMEM167AQ8TBQ9 72 aa-2.63□□□□□ -2.83
TRAJ40-201ENST00000390497 A0A096LPF7 62 aa-2.72□□□□□ -2.84
TRAJ40-201ENST00000390497 APELAP0DMC3 54 aa-2.72□□□□□ -2.84
TRAJ40-201ENST00000390497 RPL39P5Q59GN2 51 aa-2.82□□□□□ -2.86
TRAJ40-201ENST00000390497 H3BSH0 61 aa-2.87□□□□□ -2.87
TRAJ40-201ENST00000390497 UTRNP46939 3433 aa-2.88□□□□□ -2.87
TRAJ40-201ENST00000390497 Q9Y3F1 56 aa-2.89□□□□□ -2.87
TRAJ40-201ENST00000390497 DEFB108AA8MXU0 73 aa-2.92□□□□□ -2.88
TRAJ40-201ENST00000390497 HTN3P15516 51 aa-2.96□□□□□ -2.88
TRAJ40-201ENST00000390497 GOLGB1Q14789 3259 aaKnown RBP-3.09□□□□□ -2.9
TRAJ40-201ENST00000390497 COX14Q96I36 57 aa-3.25□□□□□ -2.93
TRAJ40-201ENST00000390497 DEFB108BQ8NET1 73 aa-3.39□□□□□ -2.95
TRAJ40-201ENST00000390497 STATHP02808 62 aa-3.87□□□□□ -3.03
Retrieved 77 of 20,778 RNA–protein pairs in 109.8 ms