RNA–Protein interactions for RNA: ENST00000389805.8

SQSTM1-202, Transcript of sequestosome 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQSTM1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-202ENST00000389805 MUC12Q9UKN1 5478 aa6.06□□□□□ -1.44
SQSTM1-202ENST00000389805 MT1LQ93083 61 aa6.06□□□□□ -1.44
SQSTM1-202ENST00000389805 FCGBPQ9Y6R7 5405 aaPredicted RBP6.02□□□□□ -1.45
SQSTM1-202ENST00000389805 KRTAP4-3Q9BYR4 195 aa5.87□□□□□ -1.47
SQSTM1-202ENST00000389805 LOC100996750A0A140TA64 210 aa5.8□□□□□ -1.48
SQSTM1-202ENST00000389805 CRCT1Q9UGL9 99 aa5.8□□□□□ -1.48
SQSTM1-202ENST00000389805 KRTAP19-4Q3LI73 84 aa5.78□□□□□ -1.48
SQSTM1-202ENST00000389805 MACF1Q9UPN3 7388 aaKnown RBP5.75□□□□□ -1.49
SQSTM1-202ENST00000389805 SYNE2Q8WXH0 6885 aaKnown RBP5.75□□□□□ -1.49
SQSTM1-202ENST00000389805 MT1GP13640 62 aa5.72□□□□□ -1.49
SQSTM1-202ENST00000389805 KRTAP19-3Q7Z4W3 81 aa5.7□□□□□ -1.5
SQSTM1-202ENST00000389805 KRTAP12-4P60329 112 aa5.7□□□□□ -1.5
SQSTM1-202ENST00000389805 MT1MQ8N339 61 aa5.69□□□□□ -1.5
SQSTM1-202ENST00000389805 SYNE1Q8NF91 8797 aaKnown RBP5.66□□□□□ -1.5
SQSTM1-202ENST00000389805 SPRR2FQ96RM1 72 aa5.63□□□□□ -1.51
SQSTM1-202ENST00000389805 OBSCNQ5VST9 7968 aa5.61□□□□□ -1.51
SQSTM1-202ENST00000389805 MDN1Q9NU22 5596 aa5.56□□□□□ -1.52
SQSTM1-202ENST00000389805 LCE5AQ5TCM9 118 aa5.53□□□□□ -1.52
SQSTM1-202ENST00000389805 KRTAP4-9Q9BYQ8 210 aa5.41□□□□□ -1.54
SQSTM1-202ENST00000389805 KRTAP9-2Q9BYQ4 174 aa5.4□□□□□ -1.54
SQSTM1-202ENST00000389805 LCE3BQ5TA77 95 aa5.37□□□□□ -1.55
SQSTM1-202ENST00000389805 LCE1AQ5T7P2 110 aa5.25□□□□□ -1.57
SQSTM1-202ENST00000389805 KRTAP5-9P26371 169 aa5.19□□□□□ -1.58
SQSTM1-202ENST00000389805 KRTAP6-1Q3LI64 71 aa5.18□□□□□ -1.58
SQSTM1-202ENST00000389805 KRTAP9-7A8MTY7 169 aa5.17□□□□□ -1.58
SQSTM1-202ENST00000389805 SPRR2EP22531 72 aa5.14□□□□□ -1.59
SQSTM1-202ENST00000389805 SPRR2BP35325 72 aa5.14□□□□□ -1.59
SQSTM1-202ENST00000389805 SPRR2AP35326 72 aa5.14□□□□□ -1.59
SQSTM1-202ENST00000389805 PRM1P04553 51 aa5.11□□□□□ -1.59
SQSTM1-202ENST00000389805 LCE3DQ9BYE3 92 aa5.07□□□□□ -1.6
SQSTM1-202ENST00000389805 MT1AP04731 61 aa5.05□□□□□ -1.6
SQSTM1-202ENST00000389805 KRTAP5-5Q701N2 237 aaPredicted RBP5.04□□□□□ -1.6
SQSTM1-202ENST00000389805 LCE3EQ5T5B0 92 aa5.02□□□□□ -1.61
SQSTM1-202ENST00000389805 SPRR2DP22532 72 aa4.9□□□□□ -1.62
SQSTM1-202ENST00000389805 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.85□□□□□ -1.63
SQSTM1-202ENST00000389805 KRTAP6-2Q3LI66 62 aa4.79□□□□□ -1.64
SQSTM1-202ENST00000389805 KRTAP6-3Q3LI67 103 aa4.79□□□□□ -1.64
SQSTM1-202ENST00000389805 KRTAP9-4Q9BYQ2 154 aa4.78□□□□□ -1.64
SQSTM1-202ENST00000389805 KRTAP9-6A0A140TA67 174 aa4.72□□□□□ -1.65
SQSTM1-202ENST00000389805 KRTAP2-2Q9BYT5 123 aa4.63□□□□□ -1.67
SQSTM1-202ENST00000389805 LCE1EQ5T753 118 aa4.56□□□□□ -1.68
SQSTM1-202ENST00000389805 NEBP20929 6669 aa4.55□□□□□ -1.68
SQSTM1-202ENST00000389805 MT3P25713 68 aa4.54□□□□□ -1.68
SQSTM1-202ENST00000389805 KRTAP5-4Q6L8H1 288 aa4.45□□□□□ -1.7
SQSTM1-202ENST00000389805 KRTAP4-6Q9BYQ5 205 aa4.43□□□□□ -1.7
SQSTM1-202ENST00000389805 MT4P47944 62 aa4.42□□□□□ -1.7
SQSTM1-202ENST00000389805 LCE1DQ5T752 114 aa4.34□□□□□ -1.72
SQSTM1-202ENST00000389805 KRTAP20-2Q3LI61 65 aa4.23□□□□□ -1.73
SQSTM1-202ENST00000389805 LCE4AQ5TA78 99 aa4.22□□□□□ -1.73
SQSTM1-202ENST00000389805 HMCN1Q96RW7 5635 aa4.22□□□□□ -1.73
SQSTM1-202ENST00000389805 KRTAP9-9Q9BYP9 154 aa4.2□□□□□ -1.74
SQSTM1-202ENST00000389805 KRTAP5-2Q701N4 177 aa4.13□□□□□ -1.75
SQSTM1-202ENST00000389805 KRTAP5-3Q6L8H2 238 aa4.02□□□□□ -1.77
SQSTM1-202ENST00000389805 KRTAP20-1Q3LI63 56 aa3.97□□□□□ -1.77
SQSTM1-202ENST00000389805 LCE1FQ5T754 118 aa3.9□□□□□ -1.79
SQSTM1-202ENST00000389805 MUC5ACP98088 5654 aa3.9□□□□□ -1.79
SQSTM1-202ENST00000389805 KRTAP4-11Q9BYQ6 195 aa3.88□□□□□ -1.79
SQSTM1-202ENST00000389805 LCE1BQ5T7P3 118 aa3.84□□□□□ -1.79
SQSTM1-202ENST00000389805 MUC19Q7Z5P9 8384 aa3.8□□□□□ -1.8
SQSTM1-202ENST00000389805 KRTAP5-10Q6L8G5 202 aa3.61□□□□□ -1.83
SQSTM1-202ENST00000389805 KRTAP4-2Q9BYR5 136 aa3.59□□□□□ -1.83
SQSTM1-202ENST00000389805 KRTAP5-1Q6L8H4 278 aa3.58□□□□□ -1.84
SQSTM1-202ENST00000389805 LCE1CQ5T751 118 aa3.52□□□□□ -1.85
SQSTM1-202ENST00000389805 AHNAK2Q8IVF2 5795 aa3.41□□□□□ -1.86
SQSTM1-202ENST00000389805 KRTAP4-12Q9BQ66 201 aa3.39□□□□□ -1.87
SQSTM1-202ENST00000389805 KRTAP5-8O75690 187 aa3.38□□□□□ -1.87
SQSTM1-202ENST00000389805 MUC5BQ9HC84 5762 aaPredicted RBP3.37□□□□□ -1.87
SQSTM1-202ENST00000389805 KRTAP21-2Q3LI59 83 aa3.33□□□□□ -1.88
SQSTM1-202ENST00000389805 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.27□□□□□ -1.89
SQSTM1-202ENST00000389805 KRTAP4-4Q9BYR3 166 aa3.26□□□□□ -1.89
SQSTM1-202ENST00000389805 KRTAP5-7Q6L8G8 165 aa3.22□□□□□ -1.89
SQSTM1-202ENST00000389805 KRTAP21-1Q3LI58 79 aa3.14□□□□□ -1.91
SQSTM1-202ENST00000389805 GPR98Q8WXG9 6306 aa3.04□□□□□ -1.92
SQSTM1-202ENST00000389805 KRTAP5-11Q6L8G4 156 aa3.02□□□□□ -1.93
SQSTM1-202ENST00000389805 PHGR1C9JFL3 82 aa2.64□□□□□ -1.99
SQSTM1-202ENST00000389805 AHNAKQ09666 5890 aaKnown RBP2.52□□□□□ -2.01
SQSTM1-202ENST00000389805 MUC16Q8WXI7 14507 aa1.73□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 89.7 ms