RNA–Protein interactions for RNA: ENST00000388901.9

COPS2-202, Transcript of COP9 signalosome subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS2, Length 6,628 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS2-202ENST00000388901 LRP2P98164 4655 aa1.55□□□□□ -2.16
COPS2-202ENST00000388901 MT1XP80297 61 aa1.55□□□□□ -2.16
COPS2-202ENST00000388901 FAT4Q6V0I7 4981 aa1.54□□□□□ -2.16
COPS2-202ENST00000388901 KRTAP9-8Q9BYQ0 159 aa1.54□□□□□ -2.16
COPS2-202ENST00000388901 KRTAP9-3Q9BYQ3 159 aa1.53□□□□□ -2.16
COPS2-202ENST00000388901 MUC17Q685J3 4493 aa1.53□□□□□ -2.17
COPS2-202ENST00000388901 KRTAP12-4P60329 112 aa1.52□□□□□ -2.17
COPS2-202ENST00000388901 SPRR2DP22532 72 aa1.51□□□□□ -2.17
COPS2-202ENST00000388901 MT1LQ93083 61 aa1.49□□□□□ -2.17
COPS2-202ENST00000388901 FLGP20930 4061 aaPredicted RBP1.47□□□□□ -2.17
COPS2-202ENST00000388901 KRTAP19-6Q3LI70 58 aa1.47□□□□□ -2.17
COPS2-202ENST00000388901 KRTAP19-3Q7Z4W3 81 aa1.47□□□□□ -2.17
COPS2-202ENST00000388901 MT1EP04732 61 aa1.46□□□□□ -2.18
COPS2-202ENST00000388901 KRTAP19-2Q3LHN2 52 aa1.45□□□□□ -2.18
COPS2-202ENST00000388901 KRTAP4-11Q9BYQ6 195 aa1.44□□□□□ -2.18
COPS2-202ENST00000388901 LCE3EQ5T5B0 92 aa1.43□□□□□ -2.18
COPS2-202ENST00000388901 LCE3BQ5TA77 95 aa1.42□□□□□ -2.18
COPS2-202ENST00000388901 LCE3DQ9BYE3 92 aa1.42□□□□□ -2.18
COPS2-202ENST00000388901 KRTAP9-7A8MTY7 169 aa1.41□□□□□ -2.18
COPS2-202ENST00000388901 MT3P25713 68 aa1.41□□□□□ -2.18
COPS2-202ENST00000388901 LCE5AQ5TCM9 118 aa1.4□□□□□ -2.19
COPS2-202ENST00000388901 LCE1AQ5T7P2 110 aa1.4□□□□□ -2.19
COPS2-202ENST00000388901 LCE1DQ5T752 114 aa1.39□□□□□ -2.19
COPS2-202ENST00000388901 MT1MQ8N339 61 aa1.39□□□□□ -2.19
COPS2-202ENST00000388901 USH2AO75445 5202 aa1.38□□□□□ -2.19
COPS2-202ENST00000388901 KRTAP5-4Q6L8H1 288 aa1.36□□□□□ -2.19
COPS2-202ENST00000388901 MT1AP04731 61 aa1.35□□□□□ -2.19
COPS2-202ENST00000388901 LCE4AQ5TA78 99 aa1.35□□□□□ -2.19
COPS2-202ENST00000388901 SSPOA2VEC9 5147 aa1.33□□□□□ -2.2
COPS2-202ENST00000388901 KRTAP6-3Q3LI67 103 aa1.33□□□□□ -2.2
COPS2-202ENST00000388901 MT4P47944 62 aa1.33□□□□□ -2.2
COPS2-202ENST00000388901 KRTAP5-9P26371 169 aa1.32□□□□□ -2.2
COPS2-202ENST00000388901 MUC5BQ9HC84 5762 aaPredicted RBP1.3□□□□□ -2.2
COPS2-202ENST00000388901 KRTAP19-7Q3SYF9 63 aa1.3□□□□□ -2.2
COPS2-202ENST00000388901 KRTAP2-3P0C7H8 128 aa1.3□□□□□ -2.2
COPS2-202ENST00000388901 KRTAP2-4Q9BYR9 128 aa1.3□□□□□ -2.2
COPS2-202ENST00000388901 KRTAP2-1Q9BYU5 128 aa1.3□□□□□ -2.2
COPS2-202ENST00000388901 KRTAP20-1Q3LI63 56 aa1.27□□□□□ -2.21
COPS2-202ENST00000388901 KRTAP4-3Q9BYR4 195 aa1.24□□□□□ -2.21
COPS2-202ENST00000388901 LCE1BQ5T7P3 118 aa1.22□□□□□ -2.21
COPS2-202ENST00000388901 KRTAP2-2Q9BYT5 123 aa1.22□□□□□ -2.21
COPS2-202ENST00000388901 GPR98Q8WXG9 6306 aa1.19□□□□□ -2.22
COPS2-202ENST00000388901 PRM1P04553 51 aa1.19□□□□□ -2.22
COPS2-202ENST00000388901 KMT2DO14686 5537 aa1.18□□□□□ -2.22
COPS2-202ENST00000388901 KRTAP5-11Q6L8G4 156 aa1.17□□□□□ -2.22
COPS2-202ENST00000388901 FCGBPQ9Y6R7 5405 aaPredicted RBP1.17□□□□□ -2.22
COPS2-202ENST00000388901 MDN1Q9NU22 5596 aa1.16□□□□□ -2.22
COPS2-202ENST00000388901 NEBP20929 6669 aa1.16□□□□□ -2.22
COPS2-202ENST00000388901 HMCN1Q96RW7 5635 aa1.15□□□□□ -2.23
COPS2-202ENST00000388901 OBSCNQ5VST9 7968 aa1.14□□□□□ -2.23
COPS2-202ENST00000388901 KRTAP4-4Q9BYR3 166 aa1.14□□□□□ -2.23
COPS2-202ENST00000388901 MUC12Q9UKN1 5478 aa1.14□□□□□ -2.23
COPS2-202ENST00000388901 KRTAP6-1Q3LI64 71 aa1.13□□□□□ -2.23
COPS2-202ENST00000388901 FSIP2Q5CZC0 6907 aa1.12□□□□□ -2.23
COPS2-202ENST00000388901 SYNE2Q8WXH0 6885 aaKnown RBP1.12□□□□□ -2.23
COPS2-202ENST00000388901 KRTAP6-2Q3LI66 62 aa1.11□□□□□ -2.23
COPS2-202ENST00000388901 KRTAP9-6A8MVA2 160 aa1.09□□□□□ -2.24
COPS2-202ENST00000388901 SYNE1Q8NF91 8797 aaKnown RBP1.08□□□□□ -2.24
COPS2-202ENST00000388901 LCE1CQ5T751 118 aa1.07□□□□□ -2.24
COPS2-202ENST00000388901 LCE1EQ5T753 118 aa1.07□□□□□ -2.24
COPS2-202ENST00000388901 LCE1FQ5T754 118 aa1.07□□□□□ -2.24
COPS2-202ENST00000388901 MACF1Q9UPN3 7388 aaKnown RBP1.05□□□□□ -2.24
COPS2-202ENST00000388901 KRTAP5-8O75690 187 aa1.03□□□□□ -2.24
COPS2-202ENST00000388901 AHNAKQ09666 5890 aaKnown RBP1.02□□□□□ -2.25
COPS2-202ENST00000388901 KRTAP5-1Q6L8H4 278 aa1.01□□□□□ -2.25
COPS2-202ENST00000388901 KRTAP20-2Q3LI61 65 aa1□□□□□ -2.25
COPS2-202ENST00000388901 AHNAK2Q8IVF2 5795 aa0.97□□□□□ -2.25
COPS2-202ENST00000388901 DSTQ03001 7570 aaKnown RBP0.93□□□□□ -2.26
COPS2-202ENST00000388901 KRTAP5-5Q701N2 237 aaPredicted RBP0.93□□□□□ -2.26
COPS2-202ENST00000388901 MUC5ACP98088 5654 aa0.85□□□□□ -2.27
COPS2-202ENST00000388901 MUC19Q7Z5P9 8384 aa0.8□□□□□ -2.28
COPS2-202ENST00000388901 KRTAP5-10Q6L8G5 202 aa0.72□□□□□ -2.29
COPS2-202ENST00000388901 KRTAP5-7Q6L8G8 165 aa0.68□□□□□ -2.3
COPS2-202ENST00000388901 PHGR1C9JFL3 82 aa0.68□□□□□ -2.3
COPS2-202ENST00000388901 KRTAP21-2Q3LI59 83 aa0.62□□□□□ -2.31
COPS2-202ENST00000388901 KRTAP21-1Q3LI58 79 aa0.6□□□□□ -2.31
COPS2-202ENST00000388901 MUC16Q8WXI7 14507 aa0.4□□□□□ -2.35
Retrieved 77 of 20,778 RNA–protein pairs in 5.4 ms