RNA–Protein interactions for RNA: ENST00000388835.3

KRT18-201, Transcript of keratin 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT18, Length 1,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18-201ENST00000388835 KRTAP5-4Q6L8H1 288 aa8.77□□□□□ -1.01
KRT18-201ENST00000388835 CCDC179H3BU77 68 aa8.73□□□□□ -1.01
KRT18-201ENST00000388835 KRTAP4-6Q9BYQ5 205 aa8.69□□□□□ -1.02
KRT18-201ENST00000388835 KRTAP4-7Q9BYR0 210 aa8.69□□□□□ -1.02
KRT18-201ENST00000388835 AHNAK2Q8IVF2 5795 aa8.68□□□□□ -1.02
KRT18-201ENST00000388835 KRTAP12-3P60328 96 aa8.65□□□□□ -1.02
KRT18-201ENST00000388835 LINC01558Q9Y6Z2 57 aa8.64□□□□□ -1.03
KRT18-201ENST00000388835 ATP5EP56381 51 aaPredicted RBP8.63□□□□□ -1.03
KRT18-201ENST00000388835 KRTAP5-10Q6L8G5 202 aa8.52□□□□□ -1.05
KRT18-201ENST00000388835 UQCR11O14957 56 aa8.48□□□□□ -1.05
KRT18-201ENST00000388835 KRTAP5-5Q701N2 237 aaPredicted RBP8.34□□□□□ -1.07
KRT18-201ENST00000388835 TMEM258P61165 79 aa8.32□□□□□ -1.08
KRT18-201ENST00000388835 KRTAP25-1Q3LHN0 102 aa8.32□□□□□ -1.08
KRT18-201ENST00000388835 KRTAP20-2Q3LI61 65 aa8.32□□□□□ -1.08
KRT18-201ENST00000388835 MIR22HGQ0VDD5 57 aa8.29□□□□□ -1.08
KRT18-201ENST00000388835 KRTAP5-3Q6L8H2 238 aa8.29□□□□□ -1.08
KRT18-201ENST00000388835 LOC100996750A0A140TA64 210 aa8.23□□□□□ -1.09
KRT18-201ENST00000388835 SPRR5A0A1B0GTR4 108 aa8.22□□□□□ -1.09
KRT18-201ENST00000388835 KRTAP5-7Q6L8G8 165 aa8.21□□□□□ -1.1
KRT18-201ENST00000388835 KRTAP12-4P60329 112 aa8.2□□□□□ -1.1
KRT18-201ENST00000388835 K7ERS5 55 aa8.17□□□□□ -1.1
KRT18-201ENST00000388835 SYNE1Q8NF91 8797 aaKnown RBP8.05□□□□□ -1.12
KRT18-201ENST00000388835 KRTAP19-4Q3LI73 84 aa8.04□□□□□ -1.12
KRT18-201ENST00000388835 PSPHP1O15172 72 aa8.03□□□□□ -1.12
KRT18-201ENST00000388835 KRTAP15-1Q3LI76 137 aa8.01□□□□□ -1.13
KRT18-201ENST00000388835 PCP4P48539 62 aa7.99□□□□□ -1.13
KRT18-201ENST00000388835 KRTAP23-1A1A580 65 aa7.95□□□□□ -1.14
KRT18-201ENST00000388835 LCE3CQ5T5A8 94 aa7.95□□□□□ -1.14
KRT18-201ENST00000388835 V9GYY9 64 aa7.93□□□□□ -1.14
KRT18-201ENST00000388835 Q1T7F1 81 aa7.86□□□□□ -1.15
KRT18-201ENST00000388835 A6NED7 52 aa7.72□□□□□ -1.17
KRT18-201ENST00000388835 MT1AP04731 61 aa7.71□□□□□ -1.17
KRT18-201ENST00000388835 KRTAP6-1Q3LI64 71 aa7.71□□□□□ -1.18
KRT18-201ENST00000388835 CDC42SE1Q9NRR8 79 aa7.71□□□□□ -1.18
KRT18-201ENST00000388835 KRTAP5-2Q701N4 177 aa7.64□□□□□ -1.19
KRT18-201ENST00000388835 KRTAP4-11Q9BYQ6 195 aa7.64□□□□□ -1.19
KRT18-201ENST00000388835 ROMO1P60602 79 aa7.57□□□□□ -1.2
KRT18-201ENST00000388835 RPS28P62857 69 aaKnown RBP7.56□□□□□ -1.2
KRT18-201ENST00000388835 KRTAP9-6A8MVA2 160 aa7.52□□□□□ -1.21
KRT18-201ENST00000388835 KRTAP9-4Q9BYQ2 154 aa7.49□□□□□ -1.21
KRT18-201ENST00000388835 KRTAP6-2Q3LI66 62 aa7.42□□□□□ -1.22
KRT18-201ENST00000388835 KRTAP5-8O75690 187 aa7.39□□□□□ -1.23
KRT18-201ENST00000388835 OBSCNQ5VST9 7968 aa7.24□□□□□ -1.25
KRT18-201ENST00000388835 AHNAKQ09666 5890 aaKnown RBP7.16□□□□□ -1.26
KRT18-201ENST00000388835 MUC5ACP98088 5654 aa7.15□□□□□ -1.26
KRT18-201ENST00000388835 SVIPQ8NHG7 77 aa7.12□□□□□ -1.27
KRT18-201ENST00000388835 MUC5BQ9HC84 5762 aaPredicted RBP7.12□□□□□ -1.27
KRT18-201ENST00000388835 MT3P25713 68 aa7.07□□□□□ -1.28
KRT18-201ENST00000388835 KRTAP9-9Q9BYP9 154 aa7.06□□□□□ -1.28
KRT18-201ENST00000388835 KRTAP5-1Q6L8H4 278 aa6.91□□□□□ -1.3
KRT18-201ENST00000388835 LCE1EQ5T753 118 aa6.5□□□□□ -1.37
KRT18-201ENST00000388835 PRO0628Q9UI54 55 aa6.46□□□□□ -1.38
KRT18-201ENST00000388835 BRK1Q8WUW1 75 aa6.35□□□□□ -1.39
KRT18-201ENST00000388835 LCE1BQ5T7P3 118 aa6.24□□□□□ -1.41
KRT18-201ENST00000388835 KRTAP4-2Q9BYR5 136 aa6.2□□□□□ -1.42
KRT18-201ENST00000388835 PMAIP1Q13794 54 aa6.06□□□□□ -1.44
KRT18-201ENST00000388835 LCE1CQ5T751 118 aa6.05□□□□□ -1.44
KRT18-201ENST00000388835 KTN1-AS1Q86SY8 53 aa5.93□□□□□ -1.46
KRT18-201ENST00000388835 PRAC1Q96KF2 57 aa5.82□□□□□ -1.48
KRT18-201ENST00000388835 KRTAP4-12Q9BQ66 201 aa5.76□□□□□ -1.49
KRT18-201ENST00000388835 LCE3DQ9BYE3 92 aa5.68□□□□□ -1.5
KRT18-201ENST00000388835 KRTAP5-11Q6L8G4 156 aa5.5□□□□□ -1.53
KRT18-201ENST00000388835 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.46□□□□□ -1.54
KRT18-201ENST00000388835 LCE1FQ5T754 118 aa5.38□□□□□ -1.55
KRT18-201ENST00000388835 LCE3EQ5T5B0 92 aa5.3□□□□□ -1.56
KRT18-201ENST00000388835 KRTAP21-2Q3LI59 83 aa5.06□□□□□ -1.6
KRT18-201ENST00000388835 H3BS24 57 aa5.01□□□□□ -1.61
KRT18-201ENST00000388835 PHGR1C9JFL3 82 aa5□□□□□ -1.61
KRT18-201ENST00000388835 LUZP6Q538Z0 58 aa4.92□□□□□ -1.62
KRT18-201ENST00000388835 KRTAP4-4Q9BYR3 166 aa4.74□□□□□ -1.65
KRT18-201ENST00000388835 NDUFAF8A1L188 74 aa4.71□□□□□ -1.66
KRT18-201ENST00000388835 MUC19Q7Z5P9 8384 aa4.48□□□□□ -1.69
KRT18-201ENST00000388835 A0A0A0MQY5 61 aa4.29□□□□□ -1.72
KRT18-201ENST00000388835 INE1O15225 51 aa3.91□□□□□ -1.78
KRT18-201ENST00000388835 PRM1P04553 51 aa3.88□□□□□ -1.79
KRT18-201ENST00000388835 KRTAP21-1Q3LI58 79 aa3.77□□□□□ -1.81
KRT18-201ENST00000388835 MUC16Q8WXI7 14507 aa3.17□□□□□ -1.9
Retrieved 77 of 20,778 RNA–protein pairs in 11 ms