RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 LCE4AQ5TA78 99 aa5.87□□□□□ -1.47
VCX3A-201ENST00000381089 PP632Q6XCG6 107 aa5.86□□□□□ -1.47
VCX3A-201ENST00000381089 HMCN1Q96RW7 5635 aa5.86□□□□□ -1.47
VCX3A-201ENST00000381089 MT1GP13640 62 aa5.85□□□□□ -1.47
VCX3A-201ENST00000381089 MT4P47944 62 aa5.84□□□□□ -1.47
VCX3A-201ENST00000381089 K7ERS5 55 aa5.78□□□□□ -1.48
VCX3A-201ENST00000381089 AHNAK2Q8IVF2 5795 aa5.76□□□□□ -1.49
VCX3A-201ENST00000381089 KRTAP19-5Q3LI72 72 aa5.76□□□□□ -1.49
VCX3A-201ENST00000381089 C10orf95Q9H7T3 257 aa5.74□□□□□ -1.49
VCX3A-201ENST00000381089 CDC42SE1Q9NRR8 79 aa5.72□□□□□ -1.49
VCX3A-201ENST00000381089 MT1MQ8N339 61 aa5.71□□□□□ -1.5
VCX3A-201ENST00000381089 KRTAP5-10Q6L8G5 202 aa5.68□□□□□ -1.5
VCX3A-201ENST00000381089 KRTAP5-4Q6L8H1 288 aa5.64□□□□□ -1.51
VCX3A-201ENST00000381089 MT1LQ93083 61 aa5.64□□□□□ -1.51
VCX3A-201ENST00000381089 TNP1P09430 55 aa5.63□□□□□ -1.51
VCX3A-201ENST00000381089 KRTAP4-6Q9BYQ5 205 aa5.59□□□□□ -1.51
VCX3A-201ENST00000381089 BRK1Q8WUW1 75 aa5.56□□□□□ -1.52
VCX3A-201ENST00000381089 KRTAP4-3Q9BYR4 195 aa5.54□□□□□ -1.52
VCX3A-201ENST00000381089 KRTAP5-7Q6L8G8 165 aa5.53□□□□□ -1.52
VCX3A-201ENST00000381089 LCE3AQ5TA76 89 aa5.51□□□□□ -1.53
VCX3A-201ENST00000381089 KRTAP25-1Q3LHN0 102 aa5.5□□□□□ -1.53
VCX3A-201ENST00000381089 ROMO1P60602 79 aa5.48□□□□□ -1.53
VCX3A-201ENST00000381089 KRTAP5-3Q6L8H2 238 aa5.48□□□□□ -1.53
VCX3A-201ENST00000381089 KRTAP20-2Q3LI61 65 aa5.36□□□□□ -1.55
VCX3A-201ENST00000381089 SPRR5A0A1B0GTR4 108 aa5.32□□□□□ -1.56
VCX3A-201ENST00000381089 KRTAP4-7Q9BYR0 210 aa5.31□□□□□ -1.56
VCX3A-201ENST00000381089 KRTAP12-4P60329 112 aa5.29□□□□□ -1.56
VCX3A-201ENST00000381089 KRTAP12-3P60328 96 aa5.28□□□□□ -1.56
VCX3A-201ENST00000381089 KRTAP5-5Q701N2 237 aaPredicted RBP5.25□□□□□ -1.57
VCX3A-201ENST00000381089 KRTAP23-1A1A580 65 aa5.24□□□□□ -1.57
VCX3A-201ENST00000381089 PMAIP1Q13794 54 aa5.22□□□□□ -1.57
VCX3A-201ENST00000381089 PRO0628Q9UI54 55 aa5.16□□□□□ -1.58
VCX3A-201ENST00000381089 SYNE1Q8NF91 8797 aaKnown RBP5.16□□□□□ -1.58
VCX3A-201ENST00000381089 LOC100996750A0A140TA64 210 aa5.06□□□□□ -1.6
VCX3A-201ENST00000381089 KRTAP15-1Q3LI76 137 aa5.05□□□□□ -1.6
VCX3A-201ENST00000381089 KRTAP19-4Q3LI73 84 aa5.01□□□□□ -1.61
VCX3A-201ENST00000381089 PRAC1Q96KF2 57 aa5□□□□□ -1.61
VCX3A-201ENST00000381089 KRTAP4-11Q9BYQ6 195 aa5□□□□□ -1.61
VCX3A-201ENST00000381089 LCE3CQ5T5A8 94 aa4.88□□□□□ -1.63
VCX3A-201ENST00000381089 KRTAP5-2Q701N4 177 aa4.88□□□□□ -1.63
VCX3A-201ENST00000381089 KTN1-AS1Q86SY8 53 aa4.85□□□□□ -1.63
VCX3A-201ENST00000381089 AHNAKQ09666 5890 aaKnown RBP4.84□□□□□ -1.63
VCX3A-201ENST00000381089 MUC5ACP98088 5654 aa4.81□□□□□ -1.64
VCX3A-201ENST00000381089 KRTAP5-8O75690 187 aa4.81□□□□□ -1.64
VCX3A-201ENST00000381089 MT1AP04731 61 aa4.81□□□□□ -1.64
VCX3A-201ENST00000381089 MUC5BQ9HC84 5762 aaPredicted RBP4.8□□□□□ -1.64
VCX3A-201ENST00000381089 KRTAP6-1Q3LI64 71 aa4.78□□□□□ -1.64
VCX3A-201ENST00000381089 KRTAP9-9Q9BYP9 154 aa4.69□□□□□ -1.66
VCX3A-201ENST00000381089 SVIPQ8NHG7 77 aa4.68□□□□□ -1.66
VCX3A-201ENST00000381089 KRTAP9-4Q9BYQ2 154 aa4.68□□□□□ -1.66
VCX3A-201ENST00000381089 OBSCNQ5VST9 7968 aa4.66□□□□□ -1.66
VCX3A-201ENST00000381089 KRTAP6-2Q3LI66 62 aa4.65□□□□□ -1.67
VCX3A-201ENST00000381089 KRTAP9-6A8MVA2 160 aa4.62□□□□□ -1.67
VCX3A-201ENST00000381089 MT3P25713 68 aa4.45□□□□□ -1.7
VCX3A-201ENST00000381089 KRTAP5-1Q6L8H4 278 aa4.43□□□□□ -1.7
VCX3A-201ENST00000381089 LCE1EQ5T753 118 aa4.16□□□□□ -1.74
VCX3A-201ENST00000381089 LUZP6Q538Z0 58 aa4.09□□□□□ -1.75
VCX3A-201ENST00000381089 LCE1BQ5T7P3 118 aa3.95□□□□□ -1.78
VCX3A-201ENST00000381089 KRTAP4-2Q9BYR5 136 aa3.92□□□□□ -1.78
VCX3A-201ENST00000381089 LCE1CQ5T751 118 aa3.85□□□□□ -1.79
VCX3A-201ENST00000381089 NDUFAF8A1L188 74 aa3.72□□□□□ -1.81
VCX3A-201ENST00000381089 KRTAP4-12Q9BQ66 201 aa3.69□□□□□ -1.82
VCX3A-201ENST00000381089 LCE3DQ9BYE3 92 aa3.6□□□□□ -1.83
VCX3A-201ENST00000381089 LCE1FQ5T754 118 aa3.54□□□□□ -1.84
VCX3A-201ENST00000381089 KRTAP5-11Q6L8G4 156 aa3.52□□□□□ -1.85
VCX3A-201ENST00000381089 LCE3EQ5T5B0 92 aa3.45□□□□□ -1.86
VCX3A-201ENST00000381089 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.45□□□□□ -1.86
VCX3A-201ENST00000381089 PHGR1C9JFL3 82 aa3.36□□□□□ -1.87
VCX3A-201ENST00000381089 KRTAP21-2Q3LI59 83 aa3.14□□□□□ -1.91
VCX3A-201ENST00000381089 A0A0A0MQY5 61 aa3.12□□□□□ -1.91
VCX3A-201ENST00000381089 INE1O15225 51 aa2.99□□□□□ -1.93
VCX3A-201ENST00000381089 KRTAP4-4Q9BYR3 166 aa2.93□□□□□ -1.94
VCX3A-201ENST00000381089 MUC19Q7Z5P9 8384 aa2.9□□□□□ -1.94
VCX3A-201ENST00000381089 PRM1P04553 51 aa2.85□□□□□ -1.95
VCX3A-201ENST00000381089 H3BS24 57 aa2.71□□□□□ -1.98
VCX3A-201ENST00000381089 KRTAP21-1Q3LI58 79 aa2.58□□□□□ -2
VCX3A-201ENST00000381089 MUC16Q8WXI7 14507 aa2.07□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 36.8 ms