RNA–Protein interactions for RNA: ENST00000380918.7

SREK1-203, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,433 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-203ENST00000380918 ABCA13Q86UQ4 5058 aa2.31□□□□□ -2.04
SREK1-203ENST00000380918 HMCN1Q96RW7 5635 aa2.31□□□□□ -2.04
SREK1-203ENST00000380918 KRTAP8-1Q8IUC2 63 aa2.31□□□□□ -2.04
SREK1-203ENST00000380918 HERC1Q15751 4861 aa2.29□□□□□ -2.04
SREK1-203ENST00000380918 KRTAP12-3P60328 96 aa2.26□□□□□ -2.05
SREK1-203ENST00000380918 SPRR2GQ9BYE4 73 aa2.23□□□□□ -2.05
SREK1-203ENST00000380918 MUC2Q02817 5179 aa2.21□□□□□ -2.06
SREK1-203ENST00000380918 KRTAP5-4Q6L8H1 288 aa2.18□□□□□ -2.06
SREK1-203ENST00000380918 MT1XP80297 61 aa2.14□□□□□ -2.07
SREK1-203ENST00000380918 KRTAP9-6A8MVA2 160 aa2.13□□□□□ -2.07
SREK1-203ENST00000380918 KRTAP2-3P0C7H8 128 aa2.12□□□□□ -2.07
SREK1-203ENST00000380918 KRTAP2-4Q9BYR9 128 aa2.12□□□□□ -2.07
SREK1-203ENST00000380918 KRTAP2-1Q9BYU5 128 aa2.12□□□□□ -2.07
SREK1-203ENST00000380918 HMCN2Q8NDA2 5059 aa2.12□□□□□ -2.07
SREK1-203ENST00000380918 KRTAP5-11Q6L8G4 156 aa2.11□□□□□ -2.07
SREK1-203ENST00000380918 KRTAP5-1Q6L8H4 278 aa2.11□□□□□ -2.07
SREK1-203ENST00000380918 KRTAP4-4Q9BYR3 166 aa2.11□□□□□ -2.07
SREK1-203ENST00000380918 FAT4Q6V0I7 4981 aa2.1□□□□□ -2.07
SREK1-203ENST00000380918 MT1FP04733 61 aa2.09□□□□□ -2.07
SREK1-203ENST00000380918 KRTAP19-8Q3LI54 63 aa2.08□□□□□ -2.08
SREK1-203ENST00000380918 KRTAP19-5Q3LI72 72 aa2.08□□□□□ -2.08
SREK1-203ENST00000380918 MT1BP07438 61 aa2.08□□□□□ -2.08
SREK1-203ENST00000380918 MT2AP02795 61 aa2.07□□□□□ -2.08
SREK1-203ENST00000380918 M0R2T5 61 aa2.06□□□□□ -2.08
SREK1-203ENST00000380918 MT1HP80294 61 aa2□□□□□ -2.09
SREK1-203ENST00000380918 GPR98Q8WXG9 6306 aa2□□□□□ -2.09
SREK1-203ENST00000380918 RNF213Q63HN8 5207 aa2□□□□□ -2.09
SREK1-203ENST00000380918 KMT2DO14686 5537 aa1.96□□□□□ -2.1
SREK1-203ENST00000380918 KRTAP5-2Q701N4 177 aa1.96□□□□□ -2.1
SREK1-203ENST00000380918 CRCT1Q9UGL9 99 aa1.96□□□□□ -2.1
SREK1-203ENST00000380918 FSIP2Q5CZC0 6907 aa1.92□□□□□ -2.1
SREK1-203ENST00000380918 KRTAP19-7Q3SYF9 63 aa1.9□□□□□ -2.11
SREK1-203ENST00000380918 MT1LQ93083 61 aa1.87□□□□□ -2.11
SREK1-203ENST00000380918 MT1EP04732 61 aa1.82□□□□□ -2.12
SREK1-203ENST00000380918 USH2AO75445 5202 aa1.81□□□□□ -2.12
SREK1-203ENST00000380918 PRM1P04553 51 aa1.8□□□□□ -2.12
SREK1-203ENST00000380918 MT1GP13640 62 aa1.79□□□□□ -2.12
SREK1-203ENST00000380918 KRTAP4-3Q9BYR4 195 aa1.79□□□□□ -2.12
SREK1-203ENST00000380918 SSPOA2VEC9 5147 aa1.78□□□□□ -2.12
SREK1-203ENST00000380918 KRTAP5-8O75690 187 aa1.77□□□□□ -2.13
SREK1-203ENST00000380918 KRTAP5-5Q701N2 237 aaPredicted RBP1.75□□□□□ -2.13
SREK1-203ENST00000380918 OBSCNQ5VST9 7968 aa1.74□□□□□ -2.13
SREK1-203ENST00000380918 LCE1CQ5T751 118 aa1.74□□□□□ -2.13
SREK1-203ENST00000380918 LCE1BQ5T7P3 118 aa1.74□□□□□ -2.13
SREK1-203ENST00000380918 SYNE1Q8NF91 8797 aaKnown RBP1.73□□□□□ -2.13
SREK1-203ENST00000380918 MUC19Q7Z5P9 8384 aa1.73□□□□□ -2.13
SREK1-203ENST00000380918 MUC5BQ9HC84 5762 aaPredicted RBP1.71□□□□□ -2.14
SREK1-203ENST00000380918 NEBP20929 6669 aa1.71□□□□□ -2.14
SREK1-203ENST00000380918 MT1AP04731 61 aa1.69□□□□□ -2.14
SREK1-203ENST00000380918 MT1MQ8N339 61 aa1.68□□□□□ -2.14
SREK1-203ENST00000380918 KRTAP20-1Q3LI63 56 aa1.67□□□□□ -2.14
SREK1-203ENST00000380918 KRTAP19-6Q3LI70 58 aa1.67□□□□□ -2.14
SREK1-203ENST00000380918 SYNE2Q8WXH0 6885 aaKnown RBP1.67□□□□□ -2.14
SREK1-203ENST00000380918 KRTAP6-2Q3LI66 62 aa1.65□□□□□ -2.15
SREK1-203ENST00000380918 KRTAP19-3Q7Z4W3 81 aa1.62□□□□□ -2.15
SREK1-203ENST00000380918 FCGBPQ9Y6R7 5405 aaPredicted RBP1.62□□□□□ -2.15
SREK1-203ENST00000380918 MACF1Q9UPN3 7388 aaKnown RBP1.61□□□□□ -2.15
SREK1-203ENST00000380918 KRTAP6-1Q3LI64 71 aa1.61□□□□□ -2.15
SREK1-203ENST00000380918 MUC12Q9UKN1 5478 aa1.6□□□□□ -2.15
SREK1-203ENST00000380918 DSTQ03001 7570 aaKnown RBP1.59□□□□□ -2.15
SREK1-203ENST00000380918 AHNAKQ09666 5890 aaKnown RBP1.58□□□□□ -2.16
SREK1-203ENST00000380918 SPRR2FQ96RM1 72 aa1.56□□□□□ -2.16
SREK1-203ENST00000380918 KRTAP5-7Q6L8G8 165 aa1.49□□□□□ -2.17
SREK1-203ENST00000380918 AHNAK2Q8IVF2 5795 aa1.43□□□□□ -2.18
SREK1-203ENST00000380918 SPRR2AP35326 72 aa1.42□□□□□ -2.18
SREK1-203ENST00000380918 SPRR2EP22531 72 aa1.41□□□□□ -2.18
SREK1-203ENST00000380918 SPRR2BP35325 72 aa1.41□□□□□ -2.18
SREK1-203ENST00000380918 MDN1Q9NU22 5596 aa1.4□□□□□ -2.19
SREK1-203ENST00000380918 KRTAP5-10Q6L8G5 202 aa1.38□□□□□ -2.19
SREK1-203ENST00000380918 SPRR2DP22532 72 aa1.37□□□□□ -2.19
SREK1-203ENST00000380918 MUC5ACP98088 5654 aa1.23□□□□□ -2.21
SREK1-203ENST00000380918 MT4P47944 62 aa1.18□□□□□ -2.22
SREK1-203ENST00000380918 KRTAP20-2Q3LI61 65 aa1.15□□□□□ -2.23
SREK1-203ENST00000380918 KRTAP21-1Q3LI58 79 aa1.14□□□□□ -2.23
SREK1-203ENST00000380918 KRTAP21-2Q3LI59 83 aa1.01□□□□□ -2.25
SREK1-203ENST00000380918 PHGR1C9JFL3 82 aa0.79□□□□□ -2.28
SREK1-203ENST00000380918 MUC16Q8WXI7 14507 aa0.6□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 10.5 ms