RNA–Protein interactions for RNA: ENST00000380875.7

FREM1-201, Transcript of FRAS1 related extracellular matrix 1, humanhuman

TSL 1 (best)

Gene FREM1, Length 6,126 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1-201ENST00000380875 KRTAP4-3Q9BYR4 195 aa2.82□□□□□ -1.96
FREM1-201ENST00000380875 KRTAP2-3P0C7H8 128 aa2.78□□□□□ -1.96
FREM1-201ENST00000380875 KRTAP2-4Q9BYR9 128 aa2.78□□□□□ -1.96
FREM1-201ENST00000380875 PRM1P04553 51 aa2.77□□□□□ -1.97
FREM1-201ENST00000380875 TNXBP22105 4242 aa2.76□□□□□ -1.97
FREM1-201ENST00000380875 PCLOQ9Y6V0 5065 aa2.75□□□□□ -1.97
FREM1-201ENST00000380875 KRTAP4-9Q9BYQ8 210 aa2.74□□□□□ -1.97
FREM1-201ENST00000380875 KRTAP19-2Q3LHN2 52 aa2.72□□□□□ -1.97
FREM1-201ENST00000380875 LRP2P98164 4655 aa2.72□□□□□ -1.97
FREM1-201ENST00000380875 KRTAP6-3Q3LI67 103 aa2.72□□□□□ -1.97
FREM1-201ENST00000380875 KIAA1109Q2LD37 5005 aa2.7□□□□□ -1.98
FREM1-201ENST00000380875 LCE1CQ5T751 118 aa2.7□□□□□ -1.98
FREM1-201ENST00000380875 LCE1EQ5T753 118 aa2.7□□□□□ -1.98
FREM1-201ENST00000380875 LCE1FQ5T754 118 aa2.7□□□□□ -1.98
FREM1-201ENST00000380875 LCE1AQ5T7P2 110 aa2.7□□□□□ -1.98
FREM1-201ENST00000380875 HYDINQ4G0P3 5121 aa2.69□□□□□ -1.98
FREM1-201ENST00000380875 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.69□□□□□ -1.98
FREM1-201ENST00000380875 LCE2AQ5TA79 106 aaPredicted RBP2.66□□□□□ -1.98
FREM1-201ENST00000380875 MT1AP04731 61 aa2.66□□□□□ -1.98
FREM1-201ENST00000380875 KRTAP2-2Q9BYT5 123 aa2.64□□□□□ -1.99
FREM1-201ENST00000380875 KRTAP2-1Q9BYU5 128 aa2.64□□□□□ -1.99
FREM1-201ENST00000380875 FLGP20930 4061 aaPredicted RBP2.63□□□□□ -1.99
FREM1-201ENST00000380875 LCE4AQ5TA78 99 aa2.62□□□□□ -1.99
FREM1-201ENST00000380875 SYNE2Q8WXH0 6885 aaKnown RBP2.6□□□□□ -1.99
FREM1-201ENST00000380875 KMT2CQ8NEZ4 4911 aaKnown RBP2.57□□□□□ -2
FREM1-201ENST00000380875 KRTAP6-2Q3LI66 62 aa2.57□□□□□ -2
FREM1-201ENST00000380875 EPPK1P58107 5090 aaKnown RBP2.55□□□□□ -2
FREM1-201ENST00000380875 KRTAP19-7Q3SYF9 63 aa2.53□□□□□ -2
FREM1-201ENST00000380875 KRTAP9-4Q9BYQ2 154 aa2.51□□□□□ -2.01
FREM1-201ENST00000380875 KRTAP6-1Q3LI64 71 aa2.49□□□□□ -2.01
FREM1-201ENST00000380875 KRTAP9-9Q9BYP9 154 aa2.48□□□□□ -2.01
FREM1-201ENST00000380875 ABCA13Q86UQ4 5058 aa2.42□□□□□ -2.02
FREM1-201ENST00000380875 FAT4Q6V0I7 4981 aa2.4□□□□□ -2.03
FREM1-201ENST00000380875 FSIP2Q5CZC0 6907 aa2.39□□□□□ -2.03
FREM1-201ENST00000380875 RNF213Q63HN8 5207 aa2.37□□□□□ -2.03
FREM1-201ENST00000380875 SYNE1Q8NF91 8797 aaKnown RBP2.34□□□□□ -2.03
FREM1-201ENST00000380875 HMCN2Q8NDA2 5059 aa2.34□□□□□ -2.04
FREM1-201ENST00000380875 MUC2Q02817 5179 aa2.28□□□□□ -2.04
FREM1-201ENST00000380875 UBR4Q5T4S7 5183 aa2.22□□□□□ -2.05
FREM1-201ENST00000380875 KRTAP9-6A8MVA2 160 aa2.19□□□□□ -2.06
FREM1-201ENST00000380875 NEBP20929 6669 aa2.18□□□□□ -2.06
FREM1-201ENST00000380875 KRTAP20-2Q3LI61 65 aa2.17□□□□□ -2.06
FREM1-201ENST00000380875 KRTAP4-6Q9BYQ5 205 aa2.16□□□□□ -2.06
FREM1-201ENST00000380875 OBSCNQ5VST9 7968 aa2.12□□□□□ -2.07
FREM1-201ENST00000380875 KRTAP4-12Q9BQ66 201 aa2.1□□□□□ -2.07
FREM1-201ENST00000380875 KRTAP4-2Q9BYR5 136 aa2.1□□□□□ -2.07
FREM1-201ENST00000380875 KRTAP5-9P26371 169 aa2.06□□□□□ -2.08
FREM1-201ENST00000380875 KRTAP4-4Q9BYR3 166 aa2.06□□□□□ -2.08
FREM1-201ENST00000380875 KRTAP4-11Q9BYQ6 195 aa2.06□□□□□ -2.08
FREM1-201ENST00000380875 MACF1Q9UPN3 7388 aaKnown RBP1.97□□□□□ -2.09
FREM1-201ENST00000380875 KRTAP5-4Q6L8H1 288 aa1.97□□□□□ -2.09
FREM1-201ENST00000380875 FCGBPQ9Y6R7 5405 aaPredicted RBP1.95□□□□□ -2.1
FREM1-201ENST00000380875 SSPOA2VEC9 5147 aa1.94□□□□□ -2.1
FREM1-201ENST00000380875 DSTQ03001 7570 aaKnown RBP1.9□□□□□ -2.1
FREM1-201ENST00000380875 USH2AO75445 5202 aa1.87□□□□□ -2.11
FREM1-201ENST00000380875 KMT2DO14686 5537 aa1.84□□□□□ -2.11
FREM1-201ENST00000380875 MUC19Q7Z5P9 8384 aa1.8□□□□□ -2.12
FREM1-201ENST00000380875 KRTAP5-3Q6L8H2 238 aa1.74□□□□□ -2.13
FREM1-201ENST00000380875 KRTAP5-5Q701N2 237 aaPredicted RBP1.73□□□□□ -2.13
FREM1-201ENST00000380875 GPR98Q8WXG9 6306 aa1.7□□□□□ -2.14
FREM1-201ENST00000380875 PHGR1C9JFL3 82 aa1.68□□□□□ -2.14
FREM1-201ENST00000380875 MUC12Q9UKN1 5478 aa1.62□□□□□ -2.15
FREM1-201ENST00000380875 KRTAP5-8O75690 187 aa1.6□□□□□ -2.15
FREM1-201ENST00000380875 MDN1Q9NU22 5596 aa1.59□□□□□ -2.16
FREM1-201ENST00000380875 MUC5ACP98088 5654 aa1.52□□□□□ -2.17
FREM1-201ENST00000380875 AHNAK2Q8IVF2 5795 aa1.4□□□□□ -2.19
FREM1-201ENST00000380875 HMCN1Q96RW7 5635 aa1.33□□□□□ -2.2
FREM1-201ENST00000380875 MUC5BQ9HC84 5762 aaPredicted RBP1.31□□□□□ -2.2
FREM1-201ENST00000380875 KRTAP5-10Q6L8G5 202 aa1.3□□□□□ -2.2
FREM1-201ENST00000380875 KRTAP5-2Q701N4 177 aa1.28□□□□□ -2.2
FREM1-201ENST00000380875 KRTAP5-1Q6L8H4 278 aa1.24□□□□□ -2.21
FREM1-201ENST00000380875 KRTAP5-11Q6L8G4 156 aa1.24□□□□□ -2.21
FREM1-201ENST00000380875 AHNAKQ09666 5890 aaKnown RBP1.18□□□□□ -2.22
FREM1-201ENST00000380875 KRTAP21-2Q3LI59 83 aa1.15□□□□□ -2.23
FREM1-201ENST00000380875 KRTAP5-7Q6L8G8 165 aa1.13□□□□□ -2.23
FREM1-201ENST00000380875 KRTAP21-1Q3LI58 79 aa1.12□□□□□ -2.23
FREM1-201ENST00000380875 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.04□□□□□ -2.24
FREM1-201ENST00000380875 MUC16Q8WXI7 14507 aa0.86□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 7.6 ms