RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 MT1LQ93083 61 aa5.98□□□□□ -1.45
SMN2-201ENST00000380741 SVIPQ8NHG7 77 aa5.96□□□□□ -1.46
SMN2-201ENST00000380741 KRTAP4-3Q9BYR4 195 aa5.9□□□□□ -1.46
SMN2-201ENST00000380741 C10orf95Q9H7T3 257 aa5.88□□□□□ -1.47
SMN2-201ENST00000380741 LCE3AQ5TA76 89 aa5.87□□□□□ -1.47
SMN2-201ENST00000380741 KRTAP5-4Q6L8H1 288 aa5.87□□□□□ -1.47
SMN2-201ENST00000380741 AHNAK2Q8IVF2 5795 aa5.85□□□□□ -1.47
SMN2-201ENST00000380741 SMIM26A0A096LP01 95 aa5.85□□□□□ -1.47
SMN2-201ENST00000380741 A8MU10 97 aa5.84□□□□□ -1.47
SMN2-201ENST00000380741 H7BZZ5 65 aa5.84□□□□□ -1.47
SMN2-201ENST00000380741 COX7CP15954 63 aa5.84□□□□□ -1.47
SMN2-201ENST00000380741 A0A1B0GU69 56 aa5.81□□□□□ -1.48
SMN2-201ENST00000380741 TNP1P09430 55 aa5.8□□□□□ -1.48
SMN2-201ENST00000380741 KRTAP5-10Q6L8G5 202 aa5.78□□□□□ -1.48
SMN2-201ENST00000380741 KRTAP12-3P60328 96 aa5.64□□□□□ -1.51
SMN2-201ENST00000380741 PCP4P48539 62 aa5.59□□□□□ -1.51
SMN2-201ENST00000380741 KRTAP5-3Q6L8H2 238 aa5.58□□□□□ -1.52
SMN2-201ENST00000380741 KRTAP20-2Q3LI61 65 aa5.56□□□□□ -1.52
SMN2-201ENST00000380741 KRTAP5-7Q6L8G8 165 aa5.56□□□□□ -1.52
SMN2-201ENST00000380741 KRTAP5-5Q701N2 237 aaPredicted RBP5.55□□□□□ -1.52
SMN2-201ENST00000380741 PRR15LQ9BU68 103 aa5.55□□□□□ -1.52
SMN2-201ENST00000380741 SPRR5A0A1B0GTR4 108 aa5.49□□□□□ -1.53
SMN2-201ENST00000380741 ANAPC13Q9BS18 74 aa5.49□□□□□ -1.53
SMN2-201ENST00000380741 LINC01558Q9Y6Z2 57 aa5.45□□□□□ -1.54
SMN2-201ENST00000380741 KRTAP12-4P60329 112 aa5.44□□□□□ -1.54
SMN2-201ENST00000380741 CCDC179H3BU77 68 aa5.42□□□□□ -1.54
SMN2-201ENST00000380741 ATP5EP56381 51 aaPredicted RBP5.41□□□□□ -1.54
SMN2-201ENST00000380741 SYNE1Q8NF91 8797 aaKnown RBP5.4□□□□□ -1.54
SMN2-201ENST00000380741 UQCR11O14957 56 aa5.37□□□□□ -1.55
SMN2-201ENST00000380741 KRTAP25-1Q3LHN0 102 aa5.36□□□□□ -1.55
SMN2-201ENST00000380741 A0A0A0MQY5 61 aa5.35□□□□□ -1.55
SMN2-201ENST00000380741 MIR22HGQ0VDD5 57 aa5.23□□□□□ -1.57
SMN2-201ENST00000380741 TMEM258P61165 79 aa5.18□□□□□ -1.58
SMN2-201ENST00000380741 LCE3CQ5T5A8 94 aa5.17□□□□□ -1.58
SMN2-201ENST00000380741 K7ERS5 55 aa5.16□□□□□ -1.58
SMN2-201ENST00000380741 KRTAP5-2Q701N4 177 aa5.1□□□□□ -1.59
SMN2-201ENST00000380741 MT1AP04731 61 aa5.08□□□□□ -1.6
SMN2-201ENST00000380741 KRTAP6-1Q3LI64 71 aa5.08□□□□□ -1.6
SMN2-201ENST00000380741 PSPHP1O15172 72 aa5.01□□□□□ -1.61
SMN2-201ENST00000380741 KRTAP5-8O75690 187 aa4.96□□□□□ -1.62
SMN2-201ENST00000380741 V9GYY9 64 aa4.94□□□□□ -1.62
SMN2-201ENST00000380741 KRTAP9-6A8MVA2 160 aa4.91□□□□□ -1.62
SMN2-201ENST00000380741 Q1T7F1 81 aa4.9□□□□□ -1.63
SMN2-201ENST00000380741 KRTAP6-2Q3LI66 62 aa4.9□□□□□ -1.63
SMN2-201ENST00000380741 MT3P25713 68 aa4.87□□□□□ -1.63
SMN2-201ENST00000380741 CDC42SE1Q9NRR8 79 aa4.87□□□□□ -1.63
SMN2-201ENST00000380741 MUC5ACP98088 5654 aa4.85□□□□□ -1.63
SMN2-201ENST00000380741 MUC5BQ9HC84 5762 aaPredicted RBP4.85□□□□□ -1.63
SMN2-201ENST00000380741 AHNAKQ09666 5890 aaKnown RBP4.85□□□□□ -1.63
SMN2-201ENST00000380741 OBSCNQ5VST9 7968 aa4.84□□□□□ -1.63
SMN2-201ENST00000380741 RPS28P62857 69 aaKnown RBP4.82□□□□□ -1.64
SMN2-201ENST00000380741 A6NED7 52 aa4.81□□□□□ -1.64
SMN2-201ENST00000380741 ROMO1P60602 79 aa4.78□□□□□ -1.64
SMN2-201ENST00000380741 KRTAP5-1Q6L8H4 278 aa4.62□□□□□ -1.67
SMN2-201ENST00000380741 LCE1EQ5T753 118 aa4.4□□□□□ -1.71
SMN2-201ENST00000380741 PRAC1Q96KF2 57 aa4.39□□□□□ -1.71
SMN2-201ENST00000380741 NDUFAF8A1L188 74 aa4.34□□□□□ -1.71
SMN2-201ENST00000380741 LCE1FQ5T754 118 aa4.32□□□□□ -1.72
SMN2-201ENST00000380741 KRTAP5-11Q6L8G4 156 aa4.27□□□□□ -1.73
SMN2-201ENST00000380741 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.14□□□□□ -1.75
SMN2-201ENST00000380741 LCE1BQ5T7P3 118 aa4.11□□□□□ -1.75
SMN2-201ENST00000380741 LCE1CQ5T751 118 aa4.01□□□□□ -1.77
SMN2-201ENST00000380741 BRK1Q8WUW1 75 aa3.82□□□□□ -1.8
SMN2-201ENST00000380741 LCE3DQ9BYE3 92 aa3.67□□□□□ -1.82
SMN2-201ENST00000380741 LCE3EQ5T5B0 92 aa3.65□□□□□ -1.83
SMN2-201ENST00000380741 PMAIP1Q13794 54 aa3.55□□□□□ -1.84
SMN2-201ENST00000380741 KRTAP4-4Q9BYR3 166 aa3.39□□□□□ -1.87
SMN2-201ENST00000380741 PHGR1C9JFL3 82 aa3.37□□□□□ -1.87
SMN2-201ENST00000380741 KRTAP21-2Q3LI59 83 aa3.35□□□□□ -1.87
SMN2-201ENST00000380741 MUC19Q7Z5P9 8384 aa3.03□□□□□ -1.92
SMN2-201ENST00000380741 LUZP6Q538Z0 58 aa3.01□□□□□ -1.93
SMN2-201ENST00000380741 PRO0628Q9UI54 55 aa2.99□□□□□ -1.93
SMN2-201ENST00000380741 KTN1-AS1Q86SY8 53 aa2.97□□□□□ -1.93
SMN2-201ENST00000380741 KRTAP21-1Q3LI58 79 aa2.55□□□□□ -2
SMN2-201ENST00000380741 PRM1P04553 51 aa2.45□□□□□ -2.02
SMN2-201ENST00000380741 MUC16Q8WXI7 14507 aa2.07□□□□□ -2.08
SMN2-201ENST00000380741 INE1O15225 51 aa1.57□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 131.9 ms