RNA–Protein interactions for RNA: ENST00000379960.9

ITSN1-201, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-201ENST00000379960 KRTAP4-7Q9BYR0 210 aa3.67□□□□□ -1.82
ITSN1-201ENST00000379960 SYNE2Q8WXH0 6885 aaKnown RBP3.65□□□□□ -1.83
ITSN1-201ENST00000379960 MUC12Q9UKN1 5478 aa3.61□□□□□ -1.83
ITSN1-201ENST00000379960 CRCT1Q9UGL9 99 aa3.59□□□□□ -1.83
ITSN1-201ENST00000379960 KRTAP19-7Q3SYF9 63 aa3.57□□□□□ -1.84
ITSN1-201ENST00000379960 MT1EP04732 61 aa3.49□□□□□ -1.85
ITSN1-201ENST00000379960 SPRR2FQ96RM1 72 aa3.48□□□□□ -1.85
ITSN1-201ENST00000379960 DSTQ03001 7570 aaKnown RBP3.47□□□□□ -1.85
ITSN1-201ENST00000379960 MT1LQ93083 61 aa3.43□□□□□ -1.86
ITSN1-201ENST00000379960 MDN1Q9NU22 5596 aa3.43□□□□□ -1.86
ITSN1-201ENST00000379960 KRTAP6-3Q3LI67 103 aa3.43□□□□□ -1.86
ITSN1-201ENST00000379960 KRTAP2-2Q9BYT5 123 aa3.41□□□□□ -1.86
ITSN1-201ENST00000379960 LCE1AQ5T7P2 110 aa3.4□□□□□ -1.86
ITSN1-201ENST00000379960 KRTAP9-6A0A140TA67 174 aa3.39□□□□□ -1.87
ITSN1-201ENST00000379960 LOC100996750A0A140TA64 210 aa3.38□□□□□ -1.87
ITSN1-201ENST00000379960 KRTAP4-3Q9BYR4 195 aa3.38□□□□□ -1.87
ITSN1-201ENST00000379960 PRM1P04553 51 aa3.35□□□□□ -1.87
ITSN1-201ENST00000379960 KRTAP9-7A8MTY7 169 aa3.34□□□□□ -1.88
ITSN1-201ENST00000379960 KRTAP19-3Q7Z4W3 81 aa3.33□□□□□ -1.88
ITSN1-201ENST00000379960 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.32□□□□□ -1.88
ITSN1-201ENST00000379960 KRTAP4-9Q9BYQ8 210 aa3.3□□□□□ -1.88
ITSN1-201ENST00000379960 SYNE1Q8NF91 8797 aaKnown RBP3.3□□□□□ -1.88
ITSN1-201ENST00000379960 MT1MQ8N339 61 aa3.29□□□□□ -1.88
ITSN1-201ENST00000379960 MT1GP13640 62 aa3.27□□□□□ -1.89
ITSN1-201ENST00000379960 KRTAP19-4Q3LI73 84 aa3.26□□□□□ -1.89
ITSN1-201ENST00000379960 SPRR2EP22531 72 aa3.25□□□□□ -1.89
ITSN1-201ENST00000379960 KRTAP5-9P26371 169 aa3.25□□□□□ -1.89
ITSN1-201ENST00000379960 SPRR2BP35325 72 aa3.25□□□□□ -1.89
ITSN1-201ENST00000379960 SPRR2AP35326 72 aa3.25□□□□□ -1.89
ITSN1-201ENST00000379960 LCE5AQ5TCM9 118 aa3.25□□□□□ -1.89
ITSN1-201ENST00000379960 KRTAP4-6Q9BYQ5 205 aa3.25□□□□□ -1.89
ITSN1-201ENST00000379960 LCE1EQ5T753 118 aa3.24□□□□□ -1.89
ITSN1-201ENST00000379960 LCE3BQ5TA77 95 aa3.22□□□□□ -1.89
ITSN1-201ENST00000379960 KRTAP5-5Q701N2 237 aaPredicted RBP3.21□□□□□ -1.9
ITSN1-201ENST00000379960 LCE3EQ5T5B0 92 aa3.14□□□□□ -1.91
ITSN1-201ENST00000379960 LCE3DQ9BYE3 92 aa3.13□□□□□ -1.91
ITSN1-201ENST00000379960 SPRR2DP22532 72 aa3.12□□□□□ -1.91
ITSN1-201ENST00000379960 OBSCNQ5VST9 7968 aa3.11□□□□□ -1.91
ITSN1-201ENST00000379960 LCE1DQ5T752 114 aa3.1□□□□□ -1.91
ITSN1-201ENST00000379960 NEBP20929 6669 aa3.08□□□□□ -1.92
ITSN1-201ENST00000379960 MT1AP04731 61 aa3.06□□□□□ -1.92
ITSN1-201ENST00000379960 KRTAP6-2Q3LI66 62 aa3.03□□□□□ -1.92
ITSN1-201ENST00000379960 KRTAP6-1Q3LI64 71 aa2.95□□□□□ -1.94
ITSN1-201ENST00000379960 KRTAP5-3Q6L8H2 238 aa2.95□□□□□ -1.94
ITSN1-201ENST00000379960 LCE4AQ5TA78 99 aa2.9□□□□□ -1.95
ITSN1-201ENST00000379960 KRTAP9-4Q9BYQ2 154 aa2.85□□□□□ -1.95
ITSN1-201ENST00000379960 KRTAP4-12Q9BQ66 201 aa2.84□□□□□ -1.95
ITSN1-201ENST00000379960 KRTAP9-9Q9BYP9 154 aa2.82□□□□□ -1.96
ITSN1-201ENST00000379960 MT4P47944 62 aa2.8□□□□□ -1.96
ITSN1-201ENST00000379960 LCE1FQ5T754 118 aa2.79□□□□□ -1.96
ITSN1-201ENST00000379960 KRTAP20-1Q3LI63 56 aa2.75□□□□□ -1.97
ITSN1-201ENST00000379960 KRTAP5-4Q6L8H1 288 aa2.71□□□□□ -1.98
ITSN1-201ENST00000379960 HMCN1Q96RW7 5635 aa2.69□□□□□ -1.98
ITSN1-201ENST00000379960 KRTAP20-2Q3LI61 65 aa2.61□□□□□ -1.99
ITSN1-201ENST00000379960 MT3P25713 68 aa2.6□□□□□ -1.99
ITSN1-201ENST00000379960 KRTAP4-11Q9BYQ6 195 aa2.5□□□□□ -2.01
ITSN1-201ENST00000379960 MUC19Q7Z5P9 8384 aa2.49□□□□□ -2.01
ITSN1-201ENST00000379960 KRTAP4-2Q9BYR5 136 aa2.49□□□□□ -2.01
ITSN1-201ENST00000379960 GPR98Q8WXG9 6306 aa2.46□□□□□ -2.01
ITSN1-201ENST00000379960 KRTAP5-2Q701N4 177 aa2.46□□□□□ -2.02
ITSN1-201ENST00000379960 MUC5BQ9HC84 5762 aaPredicted RBP2.38□□□□□ -2.03
ITSN1-201ENST00000379960 AHNAK2Q8IVF2 5795 aa2.3□□□□□ -2.04
ITSN1-201ENST00000379960 AHNAKQ09666 5890 aaKnown RBP2.26□□□□□ -2.05
ITSN1-201ENST00000379960 LCE1BQ5T7P3 118 aa2.25□□□□□ -2.05
ITSN1-201ENST00000379960 MUC5ACP98088 5654 aa2.24□□□□□ -2.05
ITSN1-201ENST00000379960 KRTAP5-7Q6L8G8 165 aa2.23□□□□□ -2.05
ITSN1-201ENST00000379960 KRTAP5-10Q6L8G5 202 aa2.19□□□□□ -2.06
ITSN1-201ENST00000379960 KRTAP5-1Q6L8H4 278 aa2.17□□□□□ -2.06
ITSN1-201ENST00000379960 LCE1CQ5T751 118 aa2.17□□□□□ -2.06
ITSN1-201ENST00000379960 KRTAP5-8O75690 187 aa2.15□□□□□ -2.06
ITSN1-201ENST00000379960 KRTAP21-1Q3LI58 79 aa2.1□□□□□ -2.07
ITSN1-201ENST00000379960 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.92□□□□□ -2.1
ITSN1-201ENST00000379960 KRTAP21-2Q3LI59 83 aa1.88□□□□□ -2.11
ITSN1-201ENST00000379960 KRTAP4-4Q9BYR3 166 aa1.84□□□□□ -2.12
ITSN1-201ENST00000379960 KRTAP5-11Q6L8G4 156 aa1.8□□□□□ -2.12
ITSN1-201ENST00000379960 PHGR1C9JFL3 82 aa1.57□□□□□ -2.16
ITSN1-201ENST00000379960 MUC16Q8WXI7 14507 aa1.07□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 122.5 ms