RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 RNF213Q63HN8 5207 aa1.4□□□□□ -2.19
PCDH9-201ENST00000377861 PCLOQ9Y6V0 5065 aa1.4□□□□□ -2.19
PCDH9-201ENST00000377861 LCE4AQ5TA78 99 aa1.39□□□□□ -2.19
PCDH9-201ENST00000377861 EPPK1P58107 5090 aaKnown RBP1.39□□□□□ -2.19
PCDH9-201ENST00000377861 MUC2Q02817 5179 aa1.39□□□□□ -2.19
PCDH9-201ENST00000377861 KRTAP6-3Q3LI67 103 aa1.39□□□□□ -2.19
PCDH9-201ENST00000377861 HYDINQ4G0P3 5121 aa1.38□□□□□ -2.19
PCDH9-201ENST00000377861 SPRR2DP22532 72 aa1.38□□□□□ -2.19
PCDH9-201ENST00000377861 HERC1Q15751 4861 aa1.38□□□□□ -2.19
PCDH9-201ENST00000377861 CRCT1Q9UGL9 99 aa1.37□□□□□ -2.19
PCDH9-201ENST00000377861 KRTAP5-9P26371 169 aa1.36□□□□□ -2.19
PCDH9-201ENST00000377861 MDN1Q9NU22 5596 aa1.36□□□□□ -2.19
PCDH9-201ENST00000377861 LCE1EQ5T753 118 aa1.35□□□□□ -2.19
PCDH9-201ENST00000377861 LCE3BQ5TA77 95 aa1.35□□□□□ -2.19
PCDH9-201ENST00000377861 HMCN2Q8NDA2 5059 aa1.34□□□□□ -2.19
PCDH9-201ENST00000377861 KRTAP9-6A8MVA2 160 aa1.34□□□□□ -2.2
PCDH9-201ENST00000377861 ABCA13Q86UQ4 5058 aa1.32□□□□□ -2.2
PCDH9-201ENST00000377861 UBR4Q5T4S7 5183 aa1.3□□□□□ -2.2
PCDH9-201ENST00000377861 PRM1P04553 51 aa1.29□□□□□ -2.2
PCDH9-201ENST00000377861 KRTAP2-2Q9BYT5 123 aa1.29□□□□□ -2.2
PCDH9-201ENST00000377861 FAT4Q6V0I7 4981 aa1.26□□□□□ -2.21
PCDH9-201ENST00000377861 KRTAP4-7Q9BYR0 210 aa1.25□□□□□ -2.21
PCDH9-201ENST00000377861 KRTAP6-1Q3LI64 71 aa1.22□□□□□ -2.21
PCDH9-201ENST00000377861 SYNE2Q8WXH0 6885 aaKnown RBP1.22□□□□□ -2.21
PCDH9-201ENST00000377861 KRTAP5-5Q701N2 237 aaPredicted RBP1.2□□□□□ -2.22
PCDH9-201ENST00000377861 LCE1DQ5T752 114 aa1.19□□□□□ -2.22
PCDH9-201ENST00000377861 KRTAP9-2Q9BYQ4 174 aa1.19□□□□□ -2.22
PCDH9-201ENST00000377861 KRTAP6-2Q3LI66 62 aa1.19□□□□□ -2.22
PCDH9-201ENST00000377861 KRTAP20-1Q3LI63 56 aa1.19□□□□□ -2.22
PCDH9-201ENST00000377861 USH2AO75445 5202 aa1.17□□□□□ -2.22
PCDH9-201ENST00000377861 KMT2DO14686 5537 aa1.17□□□□□ -2.22
PCDH9-201ENST00000377861 FSIP2Q5CZC0 6907 aa1.17□□□□□ -2.22
PCDH9-201ENST00000377861 NEBP20929 6669 aa1.16□□□□□ -2.22
PCDH9-201ENST00000377861 GPR98Q8WXG9 6306 aa1.16□□□□□ -2.22
PCDH9-201ENST00000377861 LOC100996750A0A140TA64 210 aa1.15□□□□□ -2.22
PCDH9-201ENST00000377861 KRTAP5-4Q6L8H1 288 aa1.15□□□□□ -2.23
PCDH9-201ENST00000377861 LCE1CQ5T751 118 aa1.14□□□□□ -2.23
PCDH9-201ENST00000377861 LCE1BQ5T7P3 118 aa1.14□□□□□ -2.23
PCDH9-201ENST00000377861 KRTAP4-3Q9BYR4 195 aa1.11□□□□□ -2.23
PCDH9-201ENST00000377861 FCGBPQ9Y6R7 5405 aaPredicted RBP1.11□□□□□ -2.23
PCDH9-201ENST00000377861 KRTAP9-6A0A140TA67 174 aa1.09□□□□□ -2.23
PCDH9-201ENST00000377861 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.07□□□□□ -2.24
PCDH9-201ENST00000377861 MUC12Q9UKN1 5478 aa1.07□□□□□ -2.24
PCDH9-201ENST00000377861 SSPOA2VEC9 5147 aa1.06□□□□□ -2.24
PCDH9-201ENST00000377861 KRTAP20-2Q3LI61 65 aa1.05□□□□□ -2.24
PCDH9-201ENST00000377861 AHNAK2Q8IVF2 5795 aa1.04□□□□□ -2.24
PCDH9-201ENST00000377861 HMCN1Q96RW7 5635 aa1.04□□□□□ -2.24
PCDH9-201ENST00000377861 KRTAP9-7A8MTY7 169 aa1.04□□□□□ -2.24
PCDH9-201ENST00000377861 OBSCNQ5VST9 7968 aa1.03□□□□□ -2.24
PCDH9-201ENST00000377861 LCE1FQ5T754 118 aa1.03□□□□□ -2.24
PCDH9-201ENST00000377861 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.03□□□□□ -2.24
PCDH9-201ENST00000377861 KRTAP5-2Q701N4 177 aa1.02□□□□□ -2.25
PCDH9-201ENST00000377861 KRTAP9-9Q9BYP9 154 aa1.02□□□□□ -2.25
PCDH9-201ENST00000377861 KRTAP4-9Q9BYQ8 210 aa1.02□□□□□ -2.25
PCDH9-201ENST00000377861 MT4P47944 62 aa1.02□□□□□ -2.25
PCDH9-201ENST00000377861 DSTQ03001 7570 aaKnown RBP1.01□□□□□ -2.25
PCDH9-201ENST00000377861 MACF1Q9UPN3 7388 aaKnown RBP1□□□□□ -2.25
PCDH9-201ENST00000377861 KRTAP4-11Q9BYQ6 195 aa0.97□□□□□ -2.25
PCDH9-201ENST00000377861 KRTAP5-3Q6L8H2 238 aa0.96□□□□□ -2.26
PCDH9-201ENST00000377861 KRTAP5-8O75690 187 aa0.96□□□□□ -2.26
PCDH9-201ENST00000377861 MUC5BQ9HC84 5762 aaPredicted RBP0.94□□□□□ -2.26
PCDH9-201ENST00000377861 SYNE1Q8NF91 8797 aaKnown RBP0.92□□□□□ -2.26
PCDH9-201ENST00000377861 KRTAP5-11Q6L8G4 156 aa0.92□□□□□ -2.26
PCDH9-201ENST00000377861 MUC5ACP98088 5654 aa0.92□□□□□ -2.26
PCDH9-201ENST00000377861 KRTAP5-1Q6L8H4 278 aa0.92□□□□□ -2.26
PCDH9-201ENST00000377861 KRTAP5-7Q6L8G8 165 aa0.92□□□□□ -2.26
PCDH9-201ENST00000377861 KRTAP5-10Q6L8G5 202 aa0.89□□□□□ -2.27
PCDH9-201ENST00000377861 KRTAP4-6Q9BYQ5 205 aa0.88□□□□□ -2.27
PCDH9-201ENST00000377861 AHNAKQ09666 5890 aaKnown RBP0.87□□□□□ -2.27
PCDH9-201ENST00000377861 KRTAP21-1Q3LI58 79 aa0.86□□□□□ -2.27
PCDH9-201ENST00000377861 KRTAP4-2Q9BYR5 136 aa0.82□□□□□ -2.28
PCDH9-201ENST00000377861 KRTAP21-2Q3LI59 83 aa0.77□□□□□ -2.29
PCDH9-201ENST00000377861 PHGR1C9JFL3 82 aa0.76□□□□□ -2.29
PCDH9-201ENST00000377861 MUC19Q7Z5P9 8384 aa0.73□□□□□ -2.29
PCDH9-201ENST00000377861 KRTAP4-12Q9BQ66 201 aa0.61□□□□□ -2.31
PCDH9-201ENST00000377861 KRTAP4-4Q9BYR3 166 aa0.56□□□□□ -2.32
PCDH9-201ENST00000377861 MUC16Q8WXI7 14507 aa0.43□□□□□ -2.34
Retrieved 77 of 20,778 RNA–protein pairs in 5.1 ms