RNA–Protein interactions for RNA: ENST00000376895.2

SSX3-203, Transcript of SSX family member 3, humanhuman

TSL 5

Gene SSX3, Length 799 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-203ENST00000376895 PRO2289Q9P1D8 64 aa2.39□□□□□ -2.03
SSX3-203ENST00000376895 KRTAP5-5Q701N2 237 aaPredicted RBP2.38□□□□□ -2.03
SSX3-203ENST00000376895 LINC01554Q52M75 96 aa2.37□□□□□ -2.03
SSX3-203ENST00000376895 SPRR2GQ9BYE4 73 aa2.37□□□□□ -2.03
SSX3-203ENST00000376895 UQCR11O14957 56 aa2.36□□□□□ -2.03
SSX3-203ENST00000376895 CRCT1Q9UGL9 99 aa2.36□□□□□ -2.03
SSX3-203ENST00000376895 Q5VV11 94 aa2.35□□□□□ -2.03
SSX3-203ENST00000376895 SPATA8Q6RVD6 105 aa2.34□□□□□ -2.03
SSX3-203ENST00000376895 PLAC4Q8WY50 150 aa2.34□□□□□ -2.03
SSX3-203ENST00000376895 A0A0D9SG42 100 aa2.33□□□□□ -2.04
SSX3-203ENST00000376895 MIR22HGQ0VDD5 57 aa2.32□□□□□ -2.04
SSX3-203ENST00000376895 KRTAP6-3Q3LI67 103 aa2.32□□□□□ -2.04
SSX3-203ENST00000376895 KRTAP13-4Q3LI77 160 aa2.32□□□□□ -2.04
SSX3-203ENST00000376895 SSPOA2VEC9 5147 aa2.31□□□□□ -2.04
SSX3-203ENST00000376895 A6NN06 94 aa2.31□□□□□ -2.04
SSX3-203ENST00000376895 KRTAP19-8Q3LI54 63 aa2.31□□□□□ -2.04
SSX3-203ENST00000376895 KTN1-AS1Q86SY8 53 aa2.31□□□□□ -2.04
SSX3-203ENST00000376895 USH2AO75445 5202 aa2.3□□□□□ -2.04
SSX3-203ENST00000376895 MT1BP07438 61 aa2.27□□□□□ -2.05
SSX3-203ENST00000376895 KRTAP12-1P59990 96 aa2.25□□□□□ -2.05
SSX3-203ENST00000376895 CDC42SE1Q9NRR8 79 aa2.25□□□□□ -2.05
SSX3-203ENST00000376895 KRTAP12-3P60328 96 aa2.23□□□□□ -2.05
SSX3-203ENST00000376895 KRTAP19-6Q3LI70 58 aa2.22□□□□□ -2.05
SSX3-203ENST00000376895 BRK1Q8WUW1 75 aa2.22□□□□□ -2.05
SSX3-203ENST00000376895 FCGBPQ9Y6R7 5405 aaPredicted RBP2.2□□□□□ -2.06
SSX3-203ENST00000376895 LCE1CQ5T751 118 aa2.2□□□□□ -2.06
SSX3-203ENST00000376895 LCE1BQ5T7P3 118 aa2.2□□□□□ -2.06
SSX3-203ENST00000376895 MT1XP80297 61 aa2.18□□□□□ -2.06
SSX3-203ENST00000376895 MACF1Q9UPN3 7388 aaKnown RBP2.16□□□□□ -2.06
SSX3-203ENST00000376895 TNP1P09430 55 aa2.14□□□□□ -2.07
SSX3-203ENST00000376895 SYNE2Q8WXH0 6885 aaKnown RBP2.13□□□□□ -2.07
SSX3-203ENST00000376895 ROMO1P60602 79 aa2.13□□□□□ -2.07
SSX3-203ENST00000376895 C10orf95Q9H7T3 257 aa2.13□□□□□ -2.07
SSX3-203ENST00000376895 KRTAP12-4P60329 112 aa2.08□□□□□ -2.08
SSX3-203ENST00000376895 KRTAP8-1Q8IUC2 63 aa2.05□□□□□ -2.08
SSX3-203ENST00000376895 KRTAP5-8O75690 187 aa2.04□□□□□ -2.08
SSX3-203ENST00000376895 NEBP20929 6669 aa2.02□□□□□ -2.09
SSX3-203ENST00000376895 MUC12Q9UKN1 5478 aa1.99□□□□□ -2.09
SSX3-203ENST00000376895 SPRR2FQ96RM1 72 aa1.98□□□□□ -2.09
SSX3-203ENST00000376895 KMT2DO14686 5537 aa1.96□□□□□ -2.1
SSX3-203ENST00000376895 KRTAP19-5Q3LI72 72 aa1.96□□□□□ -2.1
SSX3-203ENST00000376895 KRTAP19-7Q3SYF9 63 aa1.94□□□□□ -2.1
SSX3-203ENST00000376895 MDN1Q9NU22 5596 aa1.93□□□□□ -2.1
SSX3-203ENST00000376895 MT1EP04732 61 aa1.93□□□□□ -2.1
SSX3-203ENST00000376895 SPRR2EP22531 72 aa1.91□□□□□ -2.1
SSX3-203ENST00000376895 SPRR2BP35325 72 aa1.91□□□□□ -2.1
SSX3-203ENST00000376895 SPRR2AP35326 72 aa1.91□□□□□ -2.1
SSX3-203ENST00000376895 KRTAP20-1Q3LI63 56 aa1.91□□□□□ -2.1
SSX3-203ENST00000376895 MT1GP13640 62 aa1.88□□□□□ -2.11
SSX3-203ENST00000376895 KRTAP19-3Q7Z4W3 81 aa1.88□□□□□ -2.11
SSX3-203ENST00000376895 MT1LQ93083 61 aa1.88□□□□□ -2.11
SSX3-203ENST00000376895 KRTAP5-7Q6L8G8 165 aa1.86□□□□□ -2.11
SSX3-203ENST00000376895 KRTAP2-3P0C7H8 128 aa1.84□□□□□ -2.11
SSX3-203ENST00000376895 SPRR2DP22532 72 aa1.84□□□□□ -2.11
SSX3-203ENST00000376895 KRTAP2-4Q9BYR9 128 aa1.84□□□□□ -2.11
SSX3-203ENST00000376895 MT1MQ8N339 61 aa1.82□□□□□ -2.12
SSX3-203ENST00000376895 INE1O15225 51 aa1.8□□□□□ -2.12
SSX3-203ENST00000376895 KRTAP2-1Q9BYU5 128 aa1.79□□□□□ -2.12
SSX3-203ENST00000376895 MUC19Q7Z5P9 8384 aa1.78□□□□□ -2.13
SSX3-203ENST00000376895 DSTQ03001 7570 aaKnown RBP1.69□□□□□ -2.14
SSX3-203ENST00000376895 GPR98Q8WXG9 6306 aa1.66□□□□□ -2.14
SSX3-203ENST00000376895 HMCN1Q96RW7 5635 aa1.63□□□□□ -2.15
SSX3-203ENST00000376895 MT1AP04731 61 aa1.6□□□□□ -2.15
SSX3-203ENST00000376895 MT4P47944 62 aa1.6□□□□□ -2.15
SSX3-203ENST00000376895 KRTAP6-1Q3LI64 71 aa1.57□□□□□ -2.16
SSX3-203ENST00000376895 AHNAK2Q8IVF2 5795 aa1.55□□□□□ -2.16
SSX3-203ENST00000376895 KRTAP21-2Q3LI59 83 aa1.52□□□□□ -2.17
SSX3-203ENST00000376895 KRTAP20-2Q3LI61 65 aa1.52□□□□□ -2.17
SSX3-203ENST00000376895 KRTAP5-10Q6L8G5 202 aa1.49□□□□□ -2.17
SSX3-203ENST00000376895 KRTAP6-2Q3LI66 62 aa1.48□□□□□ -2.17
SSX3-203ENST00000376895 SYNE1Q8NF91 8797 aaKnown RBP1.48□□□□□ -2.17
SSX3-203ENST00000376895 MUC5BQ9HC84 5762 aaPredicted RBP1.29□□□□□ -2.2
SSX3-203ENST00000376895 AHNAKQ09666 5890 aaKnown RBP1.28□□□□□ -2.21
SSX3-203ENST00000376895 MUC5ACP98088 5654 aa1.27□□□□□ -2.21
SSX3-203ENST00000376895 PRM1P04553 51 aa1.08□□□□□ -2.24
SSX3-203ENST00000376895 PHGR1C9JFL3 82 aa0.91□□□□□ -2.26
SSX3-203ENST00000376895 MUC16Q8WXI7 14507 aa0.9□□□□□ -2.26
SSX3-203ENST00000376895 KRTAP21-1Q3LI58 79 aa0.74□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 132 ms