RNA–Protein interactions for RNA: ENST00000376745.8

PPP1CA-203, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP1CA, Length 1,476 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-203ENST00000376745 MT1GP13640 62 aa11.87□□□□□ -0.51
PPP1CA-203ENST00000376745 KRTAP2-2Q9BYT5 123 aa11.87□□□□□ -0.51
PPP1CA-203ENST00000376745 KRTAP2-1Q9BYU5 128 aa11.87□□□□□ -0.51
PPP1CA-203ENST00000376745 LCE3BQ5TA77 95 aa11.86□□□□□ -0.51
PPP1CA-203ENST00000376745 MT1LQ93083 61 aa11.86□□□□□ -0.51
PPP1CA-203ENST00000376745 KRTAP12-3P60328 96 aa11.8□□□□□ -0.52
PPP1CA-203ENST00000376745 PP632Q6XCG6 107 aa11.72□□□□□ -0.53
PPP1CA-203ENST00000376745 KRTAP23-1A1A580 65 aa11.7□□□□□ -0.54
PPP1CA-203ENST00000376745 ROMO1P60602 79 aa11.7□□□□□ -0.54
PPP1CA-203ENST00000376745 MT1MQ8N339 61 aa11.66□□□□□ -0.54
PPP1CA-203ENST00000376745 DSTQ03001 7570 aaKnown RBP11.53□□□□□ -0.56
PPP1CA-203ENST00000376745 KRTAP4-3Q9BYR4 195 aa11.37□□□□□ -0.59
PPP1CA-203ENST00000376745 KRTAP4-7Q9BYR0 210 aa11.31□□□□□ -0.6
PPP1CA-203ENST00000376745 BRK1Q8WUW1 75 aa11.27□□□□□ -0.6
PPP1CA-203ENST00000376745 KRTAP15-1Q3LI76 137 aa11.22□□□□□ -0.61
PPP1CA-203ENST00000376745 KRTAP19-4Q3LI73 84 aa11.2□□□□□ -0.62
PPP1CA-203ENST00000376745 LCE3CQ5T5A8 94 aa10.93□□□□□ -0.66
PPP1CA-203ENST00000376745 KRTAP4-9Q9BYQ8 210 aa10.88□□□□□ -0.67
PPP1CA-203ENST00000376745 LCE4AQ5TA78 99 aa10.87□□□□□ -0.67
PPP1CA-203ENST00000376745 KRTAP5-4Q6L8H1 288 aa10.83□□□□□ -0.68
PPP1CA-203ENST00000376745 LCE1DQ5T752 114 aa10.72□□□□□ -0.69
PPP1CA-203ENST00000376745 KRTAP5-5Q701N2 237 aaPredicted RBP10.69□□□□□ -0.7
PPP1CA-203ENST00000376745 LOC100996750A0A140TA64 210 aa10.68□□□□□ -0.7
PPP1CA-203ENST00000376745 MT4P47944 62 aa10.64□□□□□ -0.71
PPP1CA-203ENST00000376745 PMAIP1Q13794 54 aa10.64□□□□□ -0.71
PPP1CA-203ENST00000376745 HMCN1Q96RW7 5635 aa10.47□□□□□ -0.73
PPP1CA-203ENST00000376745 KRTAP4-6Q9BYQ5 205 aa10.46□□□□□ -0.74
PPP1CA-203ENST00000376745 KRTAP9-6A8MVA2 160 aa10.34□□□□□ -0.75
PPP1CA-203ENST00000376745 PRO0628Q9UI54 55 aa10.33□□□□□ -0.76
PPP1CA-203ENST00000376745 KRTAP12-4P60329 112 aa10.2□□□□□ -0.78
PPP1CA-203ENST00000376745 SPRR5A0A1B0GTR4 108 aa10.18□□□□□ -0.78
PPP1CA-203ENST00000376745 KRTAP20-2Q3LI61 65 aa10.15□□□□□ -0.78
PPP1CA-203ENST00000376745 PRAC1Q96KF2 57 aa10.14□□□□□ -0.79
PPP1CA-203ENST00000376745 SYNE1Q8NF91 8797 aaKnown RBP10.1□□□□□ -0.79
PPP1CA-203ENST00000376745 MT1AP04731 61 aa10.09□□□□□ -0.79
PPP1CA-203ENST00000376745 KRTAP6-1Q3LI64 71 aa10□□□□□ -0.81
PPP1CA-203ENST00000376745 GPR98Q8WXG9 6306 aa9.89□□□□□ -0.83
PPP1CA-203ENST00000376745 KRTAP5-3Q6L8H2 238 aa9.86□□□□□ -0.83
PPP1CA-203ENST00000376745 AHNAK2Q8IVF2 5795 aa9.82□□□□□ -0.84
PPP1CA-203ENST00000376745 KTN1-AS1Q86SY8 53 aa9.75□□□□□ -0.85
PPP1CA-203ENST00000376745 KRTAP9-4Q9BYQ2 154 aa9.7□□□□□ -0.86
PPP1CA-203ENST00000376745 KRTAP5-10Q6L8G5 202 aa9.69□□□□□ -0.86
PPP1CA-203ENST00000376745 KRTAP5-2Q701N4 177 aa9.59□□□□□ -0.87
PPP1CA-203ENST00000376745 KRTAP6-2Q3LI66 62 aa9.44□□□□□ -0.9
PPP1CA-203ENST00000376745 KRTAP5-7Q6L8G8 165 aa9.23□□□□□ -0.93
PPP1CA-203ENST00000376745 SVIPQ8NHG7 77 aa9.21□□□□□ -0.94
PPP1CA-203ENST00000376745 MT3P25713 68 aa9.2□□□□□ -0.94
PPP1CA-203ENST00000376745 KRTAP4-11Q9BYQ6 195 aa9.13□□□□□ -0.95
PPP1CA-203ENST00000376745 KRTAP5-8O75690 187 aa8.83□□□□□ -1
PPP1CA-203ENST00000376745 OBSCNQ5VST9 7968 aa8.78□□□□□ -1
PPP1CA-203ENST00000376745 KRTAP5-1Q6L8H4 278 aa8.5□□□□□ -1.05
PPP1CA-203ENST00000376745 LUZP6Q538Z0 58 aa8.43□□□□□ -1.06
PPP1CA-203ENST00000376745 LCE1EQ5T753 118 aa8.34□□□□□ -1.07
PPP1CA-203ENST00000376745 KRTAP9-9Q9BYP9 154 aa8.21□□□□□ -1.09
PPP1CA-203ENST00000376745 MUC5ACP98088 5654 aa8.17□□□□□ -1.1
PPP1CA-203ENST00000376745 MUC5BQ9HC84 5762 aaPredicted RBP8.01□□□□□ -1.13
PPP1CA-203ENST00000376745 LCE3DQ9BYE3 92 aa7.98□□□□□ -1.13
PPP1CA-203ENST00000376745 AHNAKQ09666 5890 aaKnown RBP7.85□□□□□ -1.15
PPP1CA-203ENST00000376745 KRTAP4-2Q9BYR5 136 aa7.83□□□□□ -1.16
PPP1CA-203ENST00000376745 LCE1CQ5T751 118 aa7.75□□□□□ -1.17
PPP1CA-203ENST00000376745 LCE1BQ5T7P3 118 aa7.75□□□□□ -1.17
PPP1CA-203ENST00000376745 LCE3EQ5T5B0 92 aa7.6□□□□□ -1.19
PPP1CA-203ENST00000376745 NDUFAF8A1L188 74 aa7.28□□□□□ -1.24
PPP1CA-203ENST00000376745 KRTAP5-6Q6L8G9 129 aaPredicted RBP7.14□□□□□ -1.27
PPP1CA-203ENST00000376745 KRTAP5-11Q6L8G4 156 aa6.96□□□□□ -1.3
PPP1CA-203ENST00000376745 KRTAP4-12Q9BQ66 201 aa6.84□□□□□ -1.31
PPP1CA-203ENST00000376745 LCE1FQ5T754 118 aa6.63□□□□□ -1.35
PPP1CA-203ENST00000376745 KRTAP21-2Q3LI59 83 aa6.61□□□□□ -1.35
PPP1CA-203ENST00000376745 PRM1P04553 51 aa6.01□□□□□ -1.45
PPP1CA-203ENST00000376745 PHGR1C9JFL3 82 aa5.99□□□□□ -1.45
PPP1CA-203ENST00000376745 A0A0A0MQY5 61 aa5.96□□□□□ -1.45
PPP1CA-203ENST00000376745 INE1O15225 51 aa5.95□□□□□ -1.46
PPP1CA-203ENST00000376745 KRTAP4-4Q9BYR3 166 aa5.91□□□□□ -1.46
PPP1CA-203ENST00000376745 MUC19Q7Z5P9 8384 aa5.38□□□□□ -1.55
PPP1CA-203ENST00000376745 H3BS24 57 aa5.04□□□□□ -1.6
PPP1CA-203ENST00000376745 KRTAP21-1Q3LI58 79 aa4.23□□□□□ -1.73
PPP1CA-203ENST00000376745 MUC16Q8WXI7 14507 aa3.83□□□□□ -1.8
Retrieved 77 of 20,778 RNA–protein pairs in 82.1 ms