RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 H7BZZ5 65 aa7.94□□□□□ -1.14
C9orf47-202ENST00000375850 A0A1B0GU69 56 aa7.9□□□□□ -1.14
C9orf47-202ENST00000375850 A8MU10 97 aa7.84□□□□□ -1.15
C9orf47-202ENST00000375850 CCDC179H3BU77 68 aa7.84□□□□□ -1.15
C9orf47-202ENST00000375850 KRTAP5-7Q6L8G8 165 aa7.84□□□□□ -1.15
C9orf47-202ENST00000375850 KRTAP5-3Q6L8H2 238 aa7.79□□□□□ -1.16
C9orf47-202ENST00000375850 KRTAP12-3P60328 96 aa7.73□□□□□ -1.17
C9orf47-202ENST00000375850 KRTAP20-2Q3LI61 65 aa7.7□□□□□ -1.18
C9orf47-202ENST00000375850 KRTAP4-7Q9BYR0 210 aa7.7□□□□□ -1.18
C9orf47-202ENST00000375850 SPRR5A0A1B0GTR4 108 aa7.69□□□□□ -1.18
C9orf47-202ENST00000375850 PCP4P48539 62 aa7.69□□□□□ -1.18
C9orf47-202ENST00000375850 KRTAP5-5Q701N2 237 aaPredicted RBP7.64□□□□□ -1.19
C9orf47-202ENST00000375850 KRTAP12-4P60329 112 aa7.6□□□□□ -1.19
C9orf47-202ENST00000375850 PRR15LQ9BU68 103 aa7.6□□□□□ -1.19
C9orf47-202ENST00000375850 ATP5EP56381 51 aaPredicted RBP7.54□□□□□ -1.2
C9orf47-202ENST00000375850 TMEM258P61165 79 aa7.47□□□□□ -1.21
C9orf47-202ENST00000375850 KRTAP19-4Q3LI73 84 aa7.44□□□□□ -1.22
C9orf47-202ENST00000375850 KRTAP25-1Q3LHN0 102 aa7.36□□□□□ -1.23
C9orf47-202ENST00000375850 LINC01558Q9Y6Z2 57 aa7.36□□□□□ -1.23
C9orf47-202ENST00000375850 SYNE1Q8NF91 8797 aaKnown RBP7.32□□□□□ -1.24
C9orf47-202ENST00000375850 LOC100996750A0A140TA64 210 aa7.32□□□□□ -1.24
C9orf47-202ENST00000375850 UQCR11O14957 56 aa7.31□□□□□ -1.24
C9orf47-202ENST00000375850 SVIPQ8NHG7 77 aa7.3□□□□□ -1.24
C9orf47-202ENST00000375850 KRTAP4-11Q9BYQ6 195 aa7.14□□□□□ -1.27
C9orf47-202ENST00000375850 KRTAP23-1A1A580 65 aa7.11□□□□□ -1.27
C9orf47-202ENST00000375850 K7ERS5 55 aa7.1□□□□□ -1.27
C9orf47-202ENST00000375850 KRTAP15-1Q3LI76 137 aa7.1□□□□□ -1.27
C9orf47-202ENST00000375850 LCE3CQ5T5A8 94 aa7.08□□□□□ -1.28
C9orf47-202ENST00000375850 MIR22HGQ0VDD5 57 aa7.07□□□□□ -1.28
C9orf47-202ENST00000375850 KRTAP5-2Q701N4 177 aa7.07□□□□□ -1.28
C9orf47-202ENST00000375850 PSPHP1O15172 72 aa7.04□□□□□ -1.28
C9orf47-202ENST00000375850 MT1AP04731 61 aa7.02□□□□□ -1.29
C9orf47-202ENST00000375850 Q1T7F1 81 aa6.99□□□□□ -1.29
C9orf47-202ENST00000375850 V9GYY9 64 aa6.98□□□□□ -1.29
C9orf47-202ENST00000375850 KRTAP6-1Q3LI64 71 aa6.94□□□□□ -1.3
C9orf47-202ENST00000375850 KRTAP5-8O75690 187 aa6.89□□□□□ -1.31
C9orf47-202ENST00000375850 RPS28P62857 69 aaKnown RBP6.81□□□□□ -1.32
C9orf47-202ENST00000375850 KRTAP9-4Q9BYQ2 154 aa6.81□□□□□ -1.32
C9orf47-202ENST00000375850 MUC5ACP98088 5654 aa6.77□□□□□ -1.33
C9orf47-202ENST00000375850 A6NED7 52 aa6.77□□□□□ -1.33
C9orf47-202ENST00000375850 AHNAKQ09666 5890 aaKnown RBP6.76□□□□□ -1.33
C9orf47-202ENST00000375850 KRTAP6-2Q3LI66 62 aa6.72□□□□□ -1.33
C9orf47-202ENST00000375850 MUC5BQ9HC84 5762 aaPredicted RBP6.71□□□□□ -1.34
C9orf47-202ENST00000375850 KRTAP9-9Q9BYP9 154 aa6.65□□□□□ -1.34
C9orf47-202ENST00000375850 CDC42SE1Q9NRR8 79 aa6.63□□□□□ -1.35
C9orf47-202ENST00000375850 KRTAP9-6A8MVA2 160 aa6.61□□□□□ -1.35
C9orf47-202ENST00000375850 OBSCNQ5VST9 7968 aa6.56□□□□□ -1.36
C9orf47-202ENST00000375850 ROMO1P60602 79 aa6.47□□□□□ -1.37
C9orf47-202ENST00000375850 MT3P25713 68 aa6.46□□□□□ -1.38
C9orf47-202ENST00000375850 KRTAP5-1Q6L8H4 278 aa6.39□□□□□ -1.39
C9orf47-202ENST00000375850 PRO0628Q9UI54 55 aa6.33□□□□□ -1.4
C9orf47-202ENST00000375850 BRK1Q8WUW1 75 aa6.09□□□□□ -1.43
C9orf47-202ENST00000375850 LCE1EQ5T753 118 aa6.06□□□□□ -1.44
C9orf47-202ENST00000375850 PMAIP1Q13794 54 aa5.92□□□□□ -1.46
C9orf47-202ENST00000375850 KTN1-AS1Q86SY8 53 aa5.76□□□□□ -1.49
C9orf47-202ENST00000375850 KRTAP4-2Q9BYR5 136 aa5.68□□□□□ -1.5
C9orf47-202ENST00000375850 LCE1BQ5T7P3 118 aa5.64□□□□□ -1.51
C9orf47-202ENST00000375850 LCE1CQ5T751 118 aa5.6□□□□□ -1.51
C9orf47-202ENST00000375850 PRAC1Q96KF2 57 aa5.54□□□□□ -1.52
C9orf47-202ENST00000375850 KRTAP4-12Q9BQ66 201 aa5.23□□□□□ -1.57
C9orf47-202ENST00000375850 LCE1FQ5T754 118 aa5.11□□□□□ -1.59
C9orf47-202ENST00000375850 KRTAP5-11Q6L8G4 156 aa5.11□□□□□ -1.59
C9orf47-202ENST00000375850 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.06□□□□□ -1.6
C9orf47-202ENST00000375850 H3BS24 57 aa5.04□□□□□ -1.6
C9orf47-202ENST00000375850 LCE3DQ9BYE3 92 aa5.04□□□□□ -1.6
C9orf47-202ENST00000375850 PHGR1C9JFL3 82 aa4.72□□□□□ -1.65
C9orf47-202ENST00000375850 LCE3EQ5T5B0 92 aa4.68□□□□□ -1.66
C9orf47-202ENST00000375850 KRTAP21-2Q3LI59 83 aa4.59□□□□□ -1.67
C9orf47-202ENST00000375850 LUZP6Q538Z0 58 aa4.53□□□□□ -1.68
C9orf47-202ENST00000375850 NDUFAF8A1L188 74 aa4.52□□□□□ -1.69
C9orf47-202ENST00000375850 A0A0A0MQY5 61 aa4.3□□□□□ -1.72
C9orf47-202ENST00000375850 KRTAP4-4Q9BYR3 166 aa4.19□□□□□ -1.74
C9orf47-202ENST00000375850 MUC19Q7Z5P9 8384 aa4.06□□□□□ -1.76
C9orf47-202ENST00000375850 INE1O15225 51 aa3.93□□□□□ -1.78
C9orf47-202ENST00000375850 KRTAP21-1Q3LI58 79 aa3.64□□□□□ -1.83
C9orf47-202ENST00000375850 PRM1P04553 51 aa3.32□□□□□ -1.88
C9orf47-202ENST00000375850 MUC16Q8WXI7 14507 aa2.87□□□□□ -1.95
Retrieved 77 of 20,778 RNA–protein pairs in 8.3 ms