RNA–Protein interactions for RNA: ENST00000375440.8

CUL4A-202, Transcript of cullin 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUL4A, Length 2,364 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-202ENST00000375440 KRTAP19-3Q7Z4W3 81 aa8.84□□□□□ -0.99
CUL4A-202ENST00000375440 MT1GP13640 62 aa8.77□□□□□ -1.01
CUL4A-202ENST00000375440 MT1MQ8N339 61 aa8.76□□□□□ -1.01
CUL4A-202ENST00000375440 KRTAP4-3Q9BYR4 195 aa8.75□□□□□ -1.01
CUL4A-202ENST00000375440 MACF1Q9UPN3 7388 aaKnown RBP8.74□□□□□ -1.01
CUL4A-202ENST00000375440 SPRR2FQ96RM1 72 aa8.73□□□□□ -1.01
CUL4A-202ENST00000375440 LCE5AQ5TCM9 118 aa8.62□□□□□ -1.03
CUL4A-202ENST00000375440 CRCT1Q9UGL9 99 aa8.61□□□□□ -1.03
CUL4A-202ENST00000375440 KRTAP2-3P0C7H8 128 aa8.61□□□□□ -1.03
CUL4A-202ENST00000375440 KRTAP2-4Q9BYR9 128 aa8.61□□□□□ -1.03
CUL4A-202ENST00000375440 KRTAP2-1Q9BYU5 128 aa8.61□□□□□ -1.03
CUL4A-202ENST00000375440 LOC100996750A0A140TA64 210 aa8.58□□□□□ -1.04
CUL4A-202ENST00000375440 SYNE2Q8WXH0 6885 aaKnown RBP8.45□□□□□ -1.06
CUL4A-202ENST00000375440 INE1O15225 51 aa8.43□□□□□ -1.06
CUL4A-202ENST00000375440 KRTAP5-9P26371 169 aa8.39□□□□□ -1.07
CUL4A-202ENST00000375440 DSTQ03001 7570 aaKnown RBP8.32□□□□□ -1.08
CUL4A-202ENST00000375440 MDN1Q9NU22 5596 aa8.28□□□□□ -1.08
CUL4A-202ENST00000375440 LCE1AQ5T7P2 110 aa8.27□□□□□ -1.09
CUL4A-202ENST00000375440 SPRR2EP22531 72 aa8.1□□□□□ -1.11
CUL4A-202ENST00000375440 SPRR2BP35325 72 aa8.1□□□□□ -1.11
CUL4A-202ENST00000375440 SPRR2AP35326 72 aa8.1□□□□□ -1.11
CUL4A-202ENST00000375440 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.96□□□□□ -1.14
CUL4A-202ENST00000375440 KRTAP6-3Q3LI67 103 aa7.91□□□□□ -1.14
CUL4A-202ENST00000375440 KRTAP5-5Q701N2 237 aaPredicted RBP7.84□□□□□ -1.15
CUL4A-202ENST00000375440 KRTAP9-6A0A140TA67 174 aa7.83□□□□□ -1.16
CUL4A-202ENST00000375440 KRTAP6-1Q3LI64 71 aa7.83□□□□□ -1.16
CUL4A-202ENST00000375440 MT1AP04731 61 aa7.81□□□□□ -1.16
CUL4A-202ENST00000375440 LCE3BQ5TA77 95 aa7.77□□□□□ -1.17
CUL4A-202ENST00000375440 SPRR2DP22532 72 aa7.76□□□□□ -1.17
CUL4A-202ENST00000375440 KRTAP4-9Q9BYQ8 210 aa7.52□□□□□ -1.21
CUL4A-202ENST00000375440 SYNE1Q8NF91 8797 aaKnown RBP7.5□□□□□ -1.21
CUL4A-202ENST00000375440 KRTAP12-4P60329 112 aa7.45□□□□□ -1.22
CUL4A-202ENST00000375440 KRTAP9-4Q9BYQ2 154 aa7.38□□□□□ -1.23
CUL4A-202ENST00000375440 NEBP20929 6669 aa7.33□□□□□ -1.24
CUL4A-202ENST00000375440 KRTAP9-7A8MTY7 169 aa7.28□□□□□ -1.24
CUL4A-202ENST00000375440 LCE3DQ9BYE3 92 aa7.22□□□□□ -1.25
CUL4A-202ENST00000375440 KRTAP5-4Q6L8H1 288 aa7.16□□□□□ -1.26
CUL4A-202ENST00000375440 KRTAP6-2Q3LI66 62 aa7.1□□□□□ -1.27
CUL4A-202ENST00000375440 LCE3EQ5T5B0 92 aa7.07□□□□□ -1.28
CUL4A-202ENST00000375440 MT3P25713 68 aa7.02□□□□□ -1.29
CUL4A-202ENST00000375440 KRTAP4-6Q9BYQ5 205 aa6.84□□□□□ -1.31
CUL4A-202ENST00000375440 LCE4AQ5TA78 99 aa6.81□□□□□ -1.32
CUL4A-202ENST00000375440 MT4P47944 62 aa6.8□□□□□ -1.32
CUL4A-202ENST00000375440 KRTAP20-2Q3LI61 65 aa6.69□□□□□ -1.34
CUL4A-202ENST00000375440 OBSCNQ5VST9 7968 aa6.68□□□□□ -1.34
CUL4A-202ENST00000375440 KRTAP2-2Q9BYT5 123 aa6.68□□□□□ -1.34
CUL4A-202ENST00000375440 KRTAP5-2Q701N4 177 aa6.6□□□□□ -1.35
CUL4A-202ENST00000375440 HMCN1Q96RW7 5635 aa6.56□□□□□ -1.36
CUL4A-202ENST00000375440 LCE1DQ5T752 114 aa6.55□□□□□ -1.36
CUL4A-202ENST00000375440 PRM1P04553 51 aa6.51□□□□□ -1.37
CUL4A-202ENST00000375440 KRTAP20-1Q3LI63 56 aa6.47□□□□□ -1.37
CUL4A-202ENST00000375440 KRTAP5-3Q6L8H2 238 aa6.43□□□□□ -1.38
CUL4A-202ENST00000375440 LCE1EQ5T753 118 aa5.92□□□□□ -1.46
CUL4A-202ENST00000375440 MUC5ACP98088 5654 aa5.83□□□□□ -1.48
CUL4A-202ENST00000375440 KRTAP9-9Q9BYP9 154 aa5.71□□□□□ -1.5
CUL4A-202ENST00000375440 LCE1BQ5T7P3 118 aa5.68□□□□□ -1.5
CUL4A-202ENST00000375440 KRTAP5-1Q6L8H4 278 aa5.66□□□□□ -1.5
CUL4A-202ENST00000375440 KRTAP4-11Q9BYQ6 195 aa5.65□□□□□ -1.51
CUL4A-202ENST00000375440 KRTAP5-10Q6L8G5 202 aa5.63□□□□□ -1.51
CUL4A-202ENST00000375440 KRTAP4-2Q9BYR5 136 aa5.6□□□□□ -1.51
CUL4A-202ENST00000375440 LCE1CQ5T751 118 aa5.56□□□□□ -1.52
CUL4A-202ENST00000375440 LCE1FQ5T754 118 aa5.47□□□□□ -1.53
CUL4A-202ENST00000375440 AHNAK2Q8IVF2 5795 aa5.45□□□□□ -1.54
CUL4A-202ENST00000375440 KRTAP5-8O75690 187 aa5.43□□□□□ -1.54
CUL4A-202ENST00000375440 KRTAP5-7Q6L8G8 165 aa5.33□□□□□ -1.56
CUL4A-202ENST00000375440 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.24□□□□□ -1.57
CUL4A-202ENST00000375440 KRTAP21-2Q3LI59 83 aa5.1□□□□□ -1.59
CUL4A-202ENST00000375440 KRTAP5-11Q6L8G4 156 aa4.84□□□□□ -1.63
CUL4A-202ENST00000375440 MUC5BQ9HC84 5762 aaPredicted RBP4.74□□□□□ -1.65
CUL4A-202ENST00000375440 GPR98Q8WXG9 6306 aa4.7□□□□□ -1.66
CUL4A-202ENST00000375440 KRTAP4-4Q9BYR3 166 aa4.58□□□□□ -1.68
CUL4A-202ENST00000375440 KRTAP4-12Q9BQ66 201 aa4.55□□□□□ -1.68
CUL4A-202ENST00000375440 PHGR1C9JFL3 82 aa4.18□□□□□ -1.74
CUL4A-202ENST00000375440 KRTAP21-1Q3LI58 79 aa4.06□□□□□ -1.76
CUL4A-202ENST00000375440 MUC19Q7Z5P9 8384 aa4.03□□□□□ -1.77
CUL4A-202ENST00000375440 AHNAKQ09666 5890 aaKnown RBP3.86□□□□□ -1.79
CUL4A-202ENST00000375440 MUC16Q8WXI7 14507 aa2.73□□□□□ -1.97
Retrieved 77 of 20,778 RNA–protein pairs in 12.5 ms