RNA–Protein interactions for RNA: ENST00000370086.7

SSR4-203, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR4, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-203ENST00000370086 RPS28P62857 69 aaKnown RBP5.08□□□□□ -1.6
SSR4-203ENST00000370086 MIR22HGQ0VDD5 57 aa5.08□□□□□ -1.6
SSR4-203ENST00000370086 KRTAP4-9Q9BYQ8 210 aa5.05□□□□□ -1.6
SSR4-203ENST00000370086 KRTAP4-3Q9BYR4 195 aa5.03□□□□□ -1.6
SSR4-203ENST00000370086 PSPHP1O15172 72 aa5.01□□□□□ -1.61
SSR4-203ENST00000370086 KRTAP12-3P60328 96 aa5□□□□□ -1.61
SSR4-203ENST00000370086 Q1T7F1 81 aa5□□□□□ -1.61
SSR4-203ENST00000370086 V9GYY9 64 aa5□□□□□ -1.61
SSR4-203ENST00000370086 GPR98Q8WXG9 6306 aa4.97□□□□□ -1.61
SSR4-203ENST00000370086 KRTAP25-1Q3LHN0 102 aa4.94□□□□□ -1.62
SSR4-203ENST00000370086 LCE1DQ5T752 114 aa4.94□□□□□ -1.62
SSR4-203ENST00000370086 KRTAP4-7Q9BYR0 210 aa4.94□□□□□ -1.62
SSR4-203ENST00000370086 K7ERS5 55 aa4.93□□□□□ -1.62
SSR4-203ENST00000370086 LCE4AQ5TA78 99 aa4.92□□□□□ -1.62
SSR4-203ENST00000370086 PRO0628Q9UI54 55 aa4.9□□□□□ -1.63
SSR4-203ENST00000370086 MT4P47944 62 aa4.88□□□□□ -1.63
SSR4-203ENST00000370086 KRTAP5-4Q6L8H1 288 aa4.87□□□□□ -1.63
SSR4-203ENST00000370086 A6NED7 52 aa4.82□□□□□ -1.64
SSR4-203ENST00000370086 HMCN1Q96RW7 5635 aa4.81□□□□□ -1.64
SSR4-203ENST00000370086 KRTAP4-6Q9BYQ5 205 aa4.77□□□□□ -1.65
SSR4-203ENST00000370086 KRTAP23-1A1A580 65 aa4.76□□□□□ -1.65
SSR4-203ENST00000370086 KRTAP5-5Q701N2 237 aaPredicted RBP4.71□□□□□ -1.66
SSR4-203ENST00000370086 CDC42SE1Q9NRR8 79 aa4.7□□□□□ -1.66
SSR4-203ENST00000370086 KRTAP19-4Q3LI73 84 aa4.68□□□□□ -1.66
SSR4-203ENST00000370086 KRTAP15-1Q3LI76 137 aa4.68□□□□□ -1.66
SSR4-203ENST00000370086 LOC100996750A0A140TA64 210 aa4.67□□□□□ -1.66
SSR4-203ENST00000370086 ROMO1P60602 79 aa4.64□□□□□ -1.67
SSR4-203ENST00000370086 BRK1Q8WUW1 75 aa4.63□□□□□ -1.67
SSR4-203ENST00000370086 PMAIP1Q13794 54 aa4.62□□□□□ -1.67
SSR4-203ENST00000370086 LCE3CQ5T5A8 94 aa4.62□□□□□ -1.67
SSR4-203ENST00000370086 AHNAK2Q8IVF2 5795 aa4.61□□□□□ -1.67
SSR4-203ENST00000370086 KRTAP20-2Q3LI61 65 aa4.58□□□□□ -1.68
SSR4-203ENST00000370086 SPRR5A0A1B0GTR4 108 aa4.55□□□□□ -1.68
SSR4-203ENST00000370086 KRTAP5-10Q6L8G5 202 aa4.55□□□□□ -1.68
SSR4-203ENST00000370086 KRTAP12-4P60329 112 aa4.53□□□□□ -1.68
SSR4-203ENST00000370086 SYNE1Q8NF91 8797 aaKnown RBP4.47□□□□□ -1.69
SSR4-203ENST00000370086 KRTAP5-3Q6L8H2 238 aa4.46□□□□□ -1.7
SSR4-203ENST00000370086 KTN1-AS1Q86SY8 53 aa4.45□□□□□ -1.7
SSR4-203ENST00000370086 KRTAP9-6A8MVA2 160 aa4.39□□□□□ -1.71
SSR4-203ENST00000370086 MT1AP04731 61 aa4.38□□□□□ -1.71
SSR4-203ENST00000370086 KRTAP6-1Q3LI64 71 aa4.37□□□□□ -1.71
SSR4-203ENST00000370086 KRTAP5-7Q6L8G8 165 aa4.36□□□□□ -1.71
SSR4-203ENST00000370086 KRTAP5-2Q701N4 177 aa4.28□□□□□ -1.72
SSR4-203ENST00000370086 KRTAP9-4Q9BYQ2 154 aa4.24□□□□□ -1.73
SSR4-203ENST00000370086 H3BS24 57 aa4.19□□□□□ -1.74
SSR4-203ENST00000370086 KRTAP4-11Q9BYQ6 195 aa4.17□□□□□ -1.74
SSR4-203ENST00000370086 KRTAP6-2Q3LI66 62 aa4.16□□□□□ -1.74
SSR4-203ENST00000370086 KRTAP5-8O75690 187 aa4.04□□□□□ -1.76
SSR4-203ENST00000370086 MT3P25713 68 aa3.99□□□□□ -1.77
SSR4-203ENST00000370086 PRAC1Q96KF2 57 aa3.97□□□□□ -1.77
SSR4-203ENST00000370086 OBSCNQ5VST9 7968 aa3.93□□□□□ -1.78
SSR4-203ENST00000370086 KRTAP5-1Q6L8H4 278 aa3.82□□□□□ -1.8
SSR4-203ENST00000370086 KRTAP9-9Q9BYP9 154 aa3.79□□□□□ -1.8
SSR4-203ENST00000370086 MUC5ACP98088 5654 aa3.79□□□□□ -1.8
SSR4-203ENST00000370086 AHNAKQ09666 5890 aaKnown RBP3.77□□□□□ -1.81
SSR4-203ENST00000370086 MUC5BQ9HC84 5762 aaPredicted RBP3.76□□□□□ -1.81
SSR4-203ENST00000370086 A0A0A0MQY5 61 aa3.68□□□□□ -1.82
SSR4-203ENST00000370086 LCE1EQ5T753 118 aa3.66□□□□□ -1.82
SSR4-203ENST00000370086 NDUFAF8A1L188 74 aa3.54□□□□□ -1.84
SSR4-203ENST00000370086 LUZP6Q538Z0 58 aa3.49□□□□□ -1.85
SSR4-203ENST00000370086 KRTAP4-2Q9BYR5 136 aa3.47□□□□□ -1.85
SSR4-203ENST00000370086 LCE1BQ5T7P3 118 aa3.45□□□□□ -1.86
SSR4-203ENST00000370086 LCE1CQ5T751 118 aa3.4□□□□□ -1.87
SSR4-203ENST00000370086 LCE3DQ9BYE3 92 aa3.33□□□□□ -1.88
SSR4-203ENST00000370086 KRTAP4-12Q9BQ66 201 aa3.14□□□□□ -1.91
SSR4-203ENST00000370086 LCE3EQ5T5B0 92 aa3.13□□□□□ -1.91
SSR4-203ENST00000370086 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.11□□□□□ -1.91
SSR4-203ENST00000370086 KRTAP5-11Q6L8G4 156 aa3.07□□□□□ -1.92
SSR4-203ENST00000370086 INE1O15225 51 aa3.05□□□□□ -1.92
SSR4-203ENST00000370086 LCE1FQ5T754 118 aa2.97□□□□□ -1.93
SSR4-203ENST00000370086 KRTAP21-2Q3LI59 83 aa2.88□□□□□ -1.95
SSR4-203ENST00000370086 PHGR1C9JFL3 82 aa2.66□□□□□ -1.98
SSR4-203ENST00000370086 KRTAP4-4Q9BYR3 166 aa2.64□□□□□ -1.99
SSR4-203ENST00000370086 PRM1P04553 51 aa2.39□□□□□ -2.03
SSR4-203ENST00000370086 MUC19Q7Z5P9 8384 aa2.38□□□□□ -2.03
SSR4-203ENST00000370086 KRTAP21-1Q3LI58 79 aa1.99□□□□□ -2.09
SSR4-203ENST00000370086 MUC16Q8WXI7 14507 aa1.73□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 40.5 ms