RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 K7ERS5 55 aa6.88□□□□□ -1.31
CHTOP-202ENST00000368687 PSPHP1O15172 72 aa6.87□□□□□ -1.31
CHTOP-202ENST00000368687 MT1EP04732 61 aa6.87□□□□□ -1.31
CHTOP-202ENST00000368687 PCP4P48539 62 aa6.81□□□□□ -1.32
CHTOP-202ENST00000368687 KRTAP19-5Q3LI72 72 aa6.8□□□□□ -1.32
CHTOP-202ENST00000368687 KRTAP19-3Q7Z4W3 81 aa6.8□□□□□ -1.32
CHTOP-202ENST00000368687 RPS28P62857 69 aaKnown RBP6.79□□□□□ -1.32
CHTOP-202ENST00000368687 LCE5AQ5TCM9 118 aa6.78□□□□□ -1.32
CHTOP-202ENST00000368687 LCE3AQ5TA76 89 aa6.75□□□□□ -1.33
CHTOP-202ENST00000368687 A6NED7 52 aa6.71□□□□□ -1.34
CHTOP-202ENST00000368687 PP632Q6XCG6 107 aa6.7□□□□□ -1.34
CHTOP-202ENST00000368687 KRTAP4-11Q9BYQ6 195 aa6.7□□□□□ -1.34
CHTOP-202ENST00000368687 MT1GP13640 62 aa6.69□□□□□ -1.34
CHTOP-202ENST00000368687 KRTAP25-1Q3LHN0 102 aa6.69□□□□□ -1.34
CHTOP-202ENST00000368687 LCE4AQ5TA78 99 aa6.67□□□□□ -1.34
CHTOP-202ENST00000368687 MT1LQ93083 61 aa6.6□□□□□ -1.35
CHTOP-202ENST00000368687 DSTQ03001 7570 aaKnown RBP6.59□□□□□ -1.35
CHTOP-202ENST00000368687 KRTAP12-3P60328 96 aa6.55□□□□□ -1.36
CHTOP-202ENST00000368687 MT1MQ8N339 61 aa6.52□□□□□ -1.37
CHTOP-202ENST00000368687 KRTAP23-1A1A580 65 aa6.49□□□□□ -1.37
CHTOP-202ENST00000368687 CDC42SE1Q9NRR8 79 aa6.49□□□□□ -1.37
CHTOP-202ENST00000368687 KRTAP5-3Q6L8H2 238 aa6.4□□□□□ -1.38
CHTOP-202ENST00000368687 ROMO1P60602 79 aa6.36□□□□□ -1.39
CHTOP-202ENST00000368687 KRTAP19-4Q3LI73 84 aa6.35□□□□□ -1.39
CHTOP-202ENST00000368687 GPR98Q8WXG9 6306 aa6.33□□□□□ -1.4
CHTOP-202ENST00000368687 KRTAP4-3Q9BYR4 195 aa6.28□□□□□ -1.4
CHTOP-202ENST00000368687 KRTAP15-1Q3LI76 137 aa6.2□□□□□ -1.42
CHTOP-202ENST00000368687 MT4P47944 62 aa6.18□□□□□ -1.42
CHTOP-202ENST00000368687 HMCN1Q96RW7 5635 aa6.15□□□□□ -1.42
CHTOP-202ENST00000368687 KRTAP5-4Q6L8H1 288 aa6.12□□□□□ -1.43
CHTOP-202ENST00000368687 LCE3CQ5T5A8 94 aa6.05□□□□□ -1.44
CHTOP-202ENST00000368687 KRTAP5-5Q701N2 237 aaPredicted RBP5.97□□□□□ -1.45
CHTOP-202ENST00000368687 BRK1Q8WUW1 75 aa5.96□□□□□ -1.46
CHTOP-202ENST00000368687 AHNAK2Q8IVF2 5795 aa5.92□□□□□ -1.46
CHTOP-202ENST00000368687 KRTAP12-4P60329 112 aa5.84□□□□□ -1.47
CHTOP-202ENST00000368687 KRTAP5-10Q6L8G5 202 aa5.84□□□□□ -1.47
CHTOP-202ENST00000368687 SPRR5A0A1B0GTR4 108 aa5.82□□□□□ -1.48
CHTOP-202ENST00000368687 KRTAP20-2Q3LI61 65 aa5.78□□□□□ -1.48
CHTOP-202ENST00000368687 SYNE1Q8NF91 8797 aaKnown RBP5.64□□□□□ -1.51
CHTOP-202ENST00000368687 MT1AP04731 61 aa5.64□□□□□ -1.51
CHTOP-202ENST00000368687 PMAIP1Q13794 54 aa5.63□□□□□ -1.51
CHTOP-202ENST00000368687 KRTAP9-6A8MVA2 160 aa5.6□□□□□ -1.51
CHTOP-202ENST00000368687 KRTAP5-7Q6L8G8 165 aa5.6□□□□□ -1.51
CHTOP-202ENST00000368687 KRTAP6-1Q3LI64 71 aa5.54□□□□□ -1.52
CHTOP-202ENST00000368687 KRTAP5-2Q701N4 177 aa5.4□□□□□ -1.54
CHTOP-202ENST00000368687 PRO0628Q9UI54 55 aa5.38□□□□□ -1.55
CHTOP-202ENST00000368687 H3BS24 57 aa5.31□□□□□ -1.56
CHTOP-202ENST00000368687 KRTAP6-2Q3LI66 62 aa5.27□□□□□ -1.57
CHTOP-202ENST00000368687 PRAC1Q96KF2 57 aa5.27□□□□□ -1.57
CHTOP-202ENST00000368687 MT3P25713 68 aa5.19□□□□□ -1.58
CHTOP-202ENST00000368687 SVIPQ8NHG7 77 aa5.19□□□□□ -1.58
CHTOP-202ENST00000368687 KRTAP5-8O75690 187 aa5.12□□□□□ -1.59
CHTOP-202ENST00000368687 KTN1-AS1Q86SY8 53 aa5.11□□□□□ -1.59
CHTOP-202ENST00000368687 OBSCNQ5VST9 7968 aa4.99□□□□□ -1.61
CHTOP-202ENST00000368687 AHNAKQ09666 5890 aaKnown RBP4.9□□□□□ -1.62
CHTOP-202ENST00000368687 MUC5BQ9HC84 5762 aaPredicted RBP4.88□□□□□ -1.63
CHTOP-202ENST00000368687 MUC5ACP98088 5654 aa4.86□□□□□ -1.63
CHTOP-202ENST00000368687 KRTAP5-1Q6L8H4 278 aa4.83□□□□□ -1.64
CHTOP-202ENST00000368687 LCE1EQ5T753 118 aa4.74□□□□□ -1.65
CHTOP-202ENST00000368687 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.72□□□□□ -1.65
CHTOP-202ENST00000368687 LUZP6Q538Z0 58 aa4.61□□□□□ -1.67
CHTOP-202ENST00000368687 KRTAP5-11Q6L8G4 156 aa4.55□□□□□ -1.68
CHTOP-202ENST00000368687 LCE3DQ9BYE3 92 aa4.42□□□□□ -1.7
CHTOP-202ENST00000368687 LCE1CQ5T751 118 aa4.38□□□□□ -1.71
CHTOP-202ENST00000368687 LCE1BQ5T7P3 118 aa4.38□□□□□ -1.71
CHTOP-202ENST00000368687 LCE3EQ5T5B0 92 aa4.19□□□□□ -1.74
CHTOP-202ENST00000368687 KRTAP4-4Q9BYR3 166 aa3.97□□□□□ -1.77
CHTOP-202ENST00000368687 LCE1FQ5T754 118 aa3.84□□□□□ -1.79
CHTOP-202ENST00000368687 NDUFAF8A1L188 74 aa3.74□□□□□ -1.81
CHTOP-202ENST00000368687 KRTAP21-2Q3LI59 83 aa3.65□□□□□ -1.83
CHTOP-202ENST00000368687 A0A0A0MQY5 61 aa3.54□□□□□ -1.84
CHTOP-202ENST00000368687 PHGR1C9JFL3 82 aa3.39□□□□□ -1.87
CHTOP-202ENST00000368687 PRM1P04553 51 aa3.22□□□□□ -1.89
CHTOP-202ENST00000368687 INE1O15225 51 aa3.14□□□□□ -1.91
CHTOP-202ENST00000368687 MUC19Q7Z5P9 8384 aa3.07□□□□□ -1.92
CHTOP-202ENST00000368687 KRTAP21-1Q3LI58 79 aa2.56□□□□□ -2
CHTOP-202ENST00000368687 MUC16Q8WXI7 14507 aa2.22□□□□□ -2.05
Retrieved 77 of 20,778 RNA–protein pairs in 97.9 ms