RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 SPART-AS1P0CW21 52 aa-1.78□□□□□ -2.69
RNU6-28P-201ENST00000362378 CPS1P31327 1500 aa-1.78□□□□□ -2.69
RNU6-28P-201ENST00000362378 CFAP47Q6ZTR5 3102 aa-1.81□□□□□ -2.7
RNU6-28P-201ENST00000362378 DEFB136Q30KP8 78 aa-1.81□□□□□ -2.7
RNU6-28P-201ENST00000362378 LMO7Q8WWI1 1683 aa-1.82□□□□□ -2.7
RNU6-28P-201ENST00000362378 BRCA2P51587 3418 aa-1.84□□□□□ -2.7
RNU6-28P-201ENST00000362378 S100ZQ8WXG8 99 aa-1.84□□□□□ -2.7
RNU6-28P-201ENST00000362378 CEP250Q9BV73 2442 aa-1.84□□□□□ -2.7
RNU6-28P-201ENST00000362378 SMIM5Q71RC9 77 aa-1.87□□□□□ -2.71
RNU6-28P-201ENST00000362378 TTTY10Q9BZA0 68 aa-1.87□□□□□ -2.71
RNU6-28P-201ENST00000362378 AGLP35573 1532 aa-1.87□□□□□ -2.71
RNU6-28P-201ENST00000362378 DEFB104AQ8WTQ1 72 aa-1.88□□□□□ -2.71
RNU6-28P-201ENST00000362378 DEFB131AP59861 70 aa-1.89□□□□□ -2.71
RNU6-28P-201ENST00000362378 PRXQ9BXM0 1461 aa-1.89□□□□□ -2.71
RNU6-28P-201ENST00000362378 CENPFP49454 3210 aa-1.9□□□□□ -2.71
RNU6-28P-201ENST00000362378 SYCP2Q9BX26 1530 aa-1.9□□□□□ -2.71
RNU6-28P-201ENST00000362378 UTRNP46939 3433 aa-1.92□□□□□ -2.72
RNU6-28P-201ENST00000362378 ABCA5Q8WWZ7 1642 aa-1.95□□□□□ -2.72
RNU6-28P-201ENST00000362378 PLNP26678 52 aa-1.95□□□□□ -2.72
RNU6-28P-201ENST00000362378 VPS13AQ96RL7 3174 aa-1.95□□□□□ -2.72
RNU6-28P-201ENST00000362378 POLR2KP53803 58 aaKnown RBP-1.96□□□□□ -2.72
RNU6-28P-201ENST00000362378 ASPMQ8IZT6 3477 aa-1.97□□□□□ -2.72
RNU6-28P-201ENST00000362378 TFF3Q07654 80 aa-1.99□□□□□ -2.73
RNU6-28P-201ENST00000362378 XIRP2A4UGR9 3374 aa-2□□□□□ -2.73
RNU6-28P-201ENST00000362378 SMIM31A0A1B0GVY4 71 aa-2□□□□□ -2.73
RNU6-28P-201ENST00000362378 MROH2AA6NES4 1674 aa-2□□□□□ -2.73
RNU6-28P-201ENST00000362378 ADCY10Q96PN6 1610 aa-2.01□□□□□ -2.73
RNU6-28P-201ENST00000362378 LEAP2Q969E1 77 aa-2.02□□□□□ -2.73
RNU6-28P-201ENST00000362378 NRXN3Q9Y4C0 1643 aa-2.03□□□□□ -2.73
RNU6-28P-201ENST00000362378 SMIM2Q9BVW6 85 aa-2.06□□□□□ -2.74
RNU6-28P-201ENST00000362378 IQGAP1P46940 1657 aa-2.08□□□□□ -2.74
RNU6-28P-201ENST00000362378 ABCC8Q09428 1581 aa-2.08□□□□□ -2.74
RNU6-28P-201ENST00000362378 DDX60Q8IY21 1712 aaKnown RBP-2.1□□□□□ -2.75
RNU6-28P-201ENST00000362378 GOLGB1Q14789 3259 aaKnown RBP-2.11□□□□□ -2.75
RNU6-28P-201ENST00000362378 CMC2Q9NRP2 79 aa-2.12□□□□□ -2.75
RNU6-28P-201ENST00000362378 FANCD2Q9BXW9 1451 aa-2.13□□□□□ -2.75
RNU6-28P-201ENST00000362378 TRPM2O94759 1503 aa-2.13□□□□□ -2.75
RNU6-28P-201ENST00000362378 NFAT5O94916 1531 aa-2.16□□□□□ -2.75
RNU6-28P-201ENST00000362378 CLTCL1P53675 1640 aa-2.17□□□□□ -2.76
RNU6-28P-201ENST00000362378 CD52P31358 61 aa-2.19□□□□□ -2.76
RNU6-28P-201ENST00000362378 ERICH3Q5RHP9 1530 aa-2.19□□□□□ -2.76
RNU6-28P-201ENST00000362378 NDUFA1O15239 70 aa-2.29□□□□□ -2.78
RNU6-28P-201ENST00000362378 DEFB133Q30KQ1 61 aa-2.29□□□□□ -2.78
RNU6-28P-201ENST00000362378 HTN1P15515 57 aa-2.43□□□□□ -2.8
RNU6-28P-201ENST00000362378 LINC01556Q5JQF7 62 aa-2.48□□□□□ -2.81
RNU6-28P-201ENST00000362378 RHPN1-AS1Q9BWJ2 59 aa-2.48□□□□□ -2.81
RNU6-28P-201ENST00000362378 SNRPGP15A8MWD9 76 aa-2.49□□□□□ -2.81
RNU6-28P-201ENST00000362378 DEFB124Q8NES8 71 aa-2.54□□□□□ -2.82
RNU6-28P-201ENST00000362378 TOMM7Q9P0U1 55 aa-2.58□□□□□ -2.82
RNU6-28P-201ENST00000362378 A0A096LNI7 61 aa-2.59□□□□□ -2.82
RNU6-28P-201ENST00000362378 LINC01590Q5TEZ4 76 aa-2.64□□□□□ -2.83
RNU6-28P-201ENST00000362378 IQGAP2Q13576 1575 aa-2.66□□□□□ -2.84
RNU6-28P-201ENST00000362378 SAMD9LQ8IVG5 1584 aa-2.66□□□□□ -2.84
RNU6-28P-201ENST00000362378 DUOX1Q9NRD9 1551 aa-2.73□□□□□ -2.85
RNU6-28P-201ENST00000362378 HTN3P15516 51 aa-2.73□□□□□ -2.85
RNU6-28P-201ENST00000362378 ATP7AQ04656 1500 aa-2.76□□□□□ -2.85
RNU6-28P-201ENST00000362378 H3BSH0 61 aa-2.76□□□□□ -2.85
RNU6-28P-201ENST00000362378 RPL39P62891 51 aaKnown RBP-2.77□□□□□ -2.85
RNU6-28P-201ENST00000362378 A0A096LPF7 62 aa-2.78□□□□□ -2.85
RNU6-28P-201ENST00000362378 APELAP0DMC3 54 aa-2.78□□□□□ -2.85
RNU6-28P-201ENST00000362378 TOMM5Q8N4H5 51 aa-2.82□□□□□ -2.86
RNU6-28P-201ENST00000362378 H3BUX3 64 aa-2.84□□□□□ -2.86
RNU6-28P-201ENST00000362378 STATHP02808 62 aa-2.89□□□□□ -2.87
RNU6-28P-201ENST00000362378 Q9Y3F1 56 aa-2.9□□□□□ -2.87
RNU6-28P-201ENST00000362378 RPL39LQ96EH5 51 aaKnown RBP-2.92□□□□□ -2.88
RNU6-28P-201ENST00000362378 TOP2AP11388 1531 aaKnown RBP-2.93□□□□□ -2.88
RNU6-28P-201ENST00000362378 MROH2BQ7Z745 1585 aa-2.95□□□□□ -2.88
RNU6-28P-201ENST00000362378 COX14Q96I36 57 aa-2.95□□□□□ -2.88
RNU6-28P-201ENST00000362378 DEFB108BQ8NET1 73 aa-3.01□□□□□ -2.89
RNU6-28P-201ENST00000362378 DEFB108AA8MXU0 73 aa-3.06□□□□□ -2.9
RNU6-28P-201ENST00000362378 PRCDQ00LT1 54 aa-3.1□□□□□ -2.91
RNU6-28P-201ENST00000362378 TMEM167AQ8TBQ9 72 aa-3.1□□□□□ -2.91
RNU6-28P-201ENST00000362378 K7EIM0 57 aa-3.24□□□□□ -2.93
RNU6-28P-201ENST00000362378 ARHGAP5-AS1Q96IT6 56 aa-3.34□□□□□ -2.94
RNU6-28P-201ENST00000362378 GCC2Q8IWJ2 1684 aa-3.49□□□□□ -2.97
RNU6-28P-201ENST00000362378 RPL39P5Q59GN2 51 aa-3.51□□□□□ -2.97
RNU6-28P-201ENST00000362378 SNRPGP62308 76 aaKnown RBP-3.56□□□□□ -2.98
Retrieved 77 of 20,778 RNA–protein pairs in 175.5 ms