RNA–Protein interactions for RNA: ENST00000362093.4

CKLF-204, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 412 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-204ENST00000362093 KRTAP4-9Q9BYQ8 210 aa6.11□□□□□ -1.43
CKLF-204ENST00000362093 DSTQ03001 7570 aaKnown RBP6.11□□□□□ -1.43
CKLF-204ENST00000362093 MT1GP13640 62 aa6.09□□□□□ -1.43
CKLF-204ENST00000362093 KRTAP4-12Q9BQ66 201 aa6.06□□□□□ -1.44
CKLF-204ENST00000362093 KRTAP9-9Q9BYP9 154 aa6.05□□□□□ -1.44
CKLF-204ENST00000362093 KRTAP9-4Q9BYQ2 154 aa6.05□□□□□ -1.44
CKLF-204ENST00000362093 MT1LQ93083 61 aa6.03□□□□□ -1.44
CKLF-204ENST00000362093 K7ERS5 55 aa6□□□□□ -1.45
CKLF-204ENST00000362093 PP632Q6XCG6 107 aa6□□□□□ -1.45
CKLF-204ENST00000362093 AHNAK2Q8IVF2 5795 aa6□□□□□ -1.45
CKLF-204ENST00000362093 PCP4P48539 62 aa5.99□□□□□ -1.45
CKLF-204ENST00000362093 RPS28P62857 69 aaKnown RBP5.98□□□□□ -1.45
CKLF-204ENST00000362093 KRTAP5-10Q6L8G5 202 aa5.98□□□□□ -1.45
CKLF-204ENST00000362093 MT1MQ8N339 61 aa5.97□□□□□ -1.45
CKLF-204ENST00000362093 KRTAP25-1Q3LHN0 102 aa5.95□□□□□ -1.46
CKLF-204ENST00000362093 HMCN1Q96RW7 5635 aa5.94□□□□□ -1.46
CKLF-204ENST00000362093 KRTAP12-3P60328 96 aa5.92□□□□□ -1.46
CKLF-204ENST00000362093 A6NED7 52 aa5.91□□□□□ -1.46
CKLF-204ENST00000362093 KRTAP5-7Q6L8G8 165 aa5.88□□□□□ -1.47
CKLF-204ENST00000362093 KRTAP4-3Q9BYR4 195 aa5.83□□□□□ -1.48
CKLF-204ENST00000362093 LCE1DQ5T752 114 aa5.81□□□□□ -1.48
CKLF-204ENST00000362093 KRTAP4-7Q9BYR0 210 aa5.8□□□□□ -1.48
CKLF-204ENST00000362093 KRTAP23-1A1A580 65 aa5.77□□□□□ -1.49
CKLF-204ENST00000362093 SPRR5A0A1B0GTR4 108 aa5.76□□□□□ -1.49
CKLF-204ENST00000362093 CDC42SE1Q9NRR8 79 aa5.71□□□□□ -1.5
CKLF-204ENST00000362093 LCE4AQ5TA78 99 aa5.69□□□□□ -1.5
CKLF-204ENST00000362093 ROMO1P60602 79 aa5.64□□□□□ -1.51
CKLF-204ENST00000362093 KRTAP19-4Q3LI73 84 aa5.63□□□□□ -1.51
CKLF-204ENST00000362093 KRTAP5-4Q6L8H1 288 aa5.63□□□□□ -1.51
CKLF-204ENST00000362093 KRTAP15-1Q3LI76 137 aa5.59□□□□□ -1.51
CKLF-204ENST00000362093 MT4P47944 62 aa5.58□□□□□ -1.52
CKLF-204ENST00000362093 KRTAP4-2Q9BYR5 136 aa5.57□□□□□ -1.52
CKLF-204ENST00000362093 KRTAP5-3Q6L8H2 238 aa5.56□□□□□ -1.52
CKLF-204ENST00000362093 LCE3CQ5T5A8 94 aa5.47□□□□□ -1.53
CKLF-204ENST00000362093 KRTAP5-5Q701N2 237 aaPredicted RBP5.47□□□□□ -1.53
CKLF-204ENST00000362093 KRTAP4-11Q9BYQ6 195 aa5.36□□□□□ -1.55
CKLF-204ENST00000362093 KRTAP20-2Q3LI61 65 aa5.28□□□□□ -1.56
CKLF-204ENST00000362093 KRTAP12-4P60329 112 aa5.27□□□□□ -1.57
CKLF-204ENST00000362093 AHNAKQ09666 5890 aaKnown RBP5.27□□□□□ -1.57
CKLF-204ENST00000362093 SYNE1Q8NF91 8797 aaKnown RBP5.21□□□□□ -1.58
CKLF-204ENST00000362093 BRK1Q8WUW1 75 aa5.2□□□□□ -1.58
CKLF-204ENST00000362093 KRTAP9-6A8MVA2 160 aa5.17□□□□□ -1.58
CKLF-204ENST00000362093 MT1AP04731 61 aa5.14□□□□□ -1.59
CKLF-204ENST00000362093 MUC5ACP98088 5654 aa5.14□□□□□ -1.59
CKLF-204ENST00000362093 KRTAP6-1Q3LI64 71 aa5.1□□□□□ -1.59
CKLF-204ENST00000362093 MUC5BQ9HC84 5762 aaPredicted RBP5.09□□□□□ -1.6
CKLF-204ENST00000362093 KRTAP5-2Q701N4 177 aa4.97□□□□□ -1.61
CKLF-204ENST00000362093 PMAIP1Q13794 54 aa4.92□□□□□ -1.62
CKLF-204ENST00000362093 KRTAP6-2Q3LI66 62 aa4.83□□□□□ -1.64
CKLF-204ENST00000362093 KRTAP5-8O75690 187 aa4.8□□□□□ -1.64
CKLF-204ENST00000362093 PRAC1Q96KF2 57 aa4.71□□□□□ -1.66
CKLF-204ENST00000362093 MT3P25713 68 aa4.69□□□□□ -1.66
CKLF-204ENST00000362093 PRO0628Q9UI54 55 aa4.64□□□□□ -1.67
CKLF-204ENST00000362093 OBSCNQ5VST9 7968 aa4.54□□□□□ -1.68
CKLF-204ENST00000362093 KRTAP5-1Q6L8H4 278 aa4.42□□□□□ -1.7
CKLF-204ENST00000362093 KTN1-AS1Q86SY8 53 aa4.41□□□□□ -1.7
CKLF-204ENST00000362093 LCE1EQ5T753 118 aa4.29□□□□□ -1.72
CKLF-204ENST00000362093 SVIPQ8NHG7 77 aa4.18□□□□□ -1.74
CKLF-204ENST00000362093 H3BS24 57 aa4.01□□□□□ -1.77
CKLF-204ENST00000362093 LCE1BQ5T7P3 118 aa3.99□□□□□ -1.77
CKLF-204ENST00000362093 LCE1CQ5T751 118 aa3.98□□□□□ -1.77
CKLF-204ENST00000362093 LCE3DQ9BYE3 92 aa3.96□□□□□ -1.78
CKLF-204ENST00000362093 LUZP6Q538Z0 58 aa3.94□□□□□ -1.78
CKLF-204ENST00000362093 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.8□□□□□ -1.8
CKLF-204ENST00000362093 LCE3EQ5T5B0 92 aa3.76□□□□□ -1.81
CKLF-204ENST00000362093 KRTAP5-11Q6L8G4 156 aa3.63□□□□□ -1.83
CKLF-204ENST00000362093 PHGR1C9JFL3 82 aa3.5□□□□□ -1.85
CKLF-204ENST00000362093 LCE1FQ5T754 118 aa3.46□□□□□ -1.86
CKLF-204ENST00000362093 KRTAP21-2Q3LI59 83 aa3.37□□□□□ -1.87
CKLF-204ENST00000362093 NDUFAF8A1L188 74 aa3.26□□□□□ -1.89
CKLF-204ENST00000362093 KRTAP4-4Q9BYR3 166 aa3.2□□□□□ -1.9
CKLF-204ENST00000362093 PRM1P04553 51 aa2.89□□□□□ -1.95
CKLF-204ENST00000362093 MUC19Q7Z5P9 8384 aa2.76□□□□□ -1.97
CKLF-204ENST00000362093 INE1O15225 51 aa2.64□□□□□ -1.99
CKLF-204ENST00000362093 KRTAP21-1Q3LI58 79 aa2.63□□□□□ -1.99
CKLF-204ENST00000362093 A0A0A0MQY5 61 aa2.58□□□□□ -2
CKLF-204ENST00000362093 MUC16Q8WXI7 14507 aa2.12□□□□□ -2.07
Retrieved 77 of 20,778 RNA–protein pairs in 8.2 ms