RNA–Protein interactions for RNA: ENST00000360228.10

CACNA1A-201, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-201ENST00000360228 KRTAP17-1Q9BYP8 105 aa4.84□□□□□ -1.63
CACNA1A-201ENST00000360228 MUC17Q685J3 4493 aa4.78□□□□□ -1.64
CACNA1A-201ENST00000360228 KRTAP6-2Q3LI66 62 aa4.76□□□□□ -1.65
CACNA1A-201ENST00000360228 KRTAP9-2Q9BYQ4 174 aa4.76□□□□□ -1.65
CACNA1A-201ENST00000360228 LRP2P98164 4655 aa4.7□□□□□ -1.66
CACNA1A-201ENST00000360228 DNHD1Q96M86 4753 aa4.7□□□□□ -1.66
CACNA1A-201ENST00000360228 RYR1P21817 5038 aa4.67□□□□□ -1.66
CACNA1A-201ENST00000360228 KRTAP20-1Q3LI63 56 aa4.66□□□□□ -1.66
CACNA1A-201ENST00000360228 LCE4AQ5TA78 99 aa4.57□□□□□ -1.68
CACNA1A-201ENST00000360228 RYR3Q15413 4870 aa4.52□□□□□ -1.69
CACNA1A-201ENST00000360228 KRTAP6-1Q3LI64 71 aa4.48□□□□□ -1.69
CACNA1A-201ENST00000360228 KRTAP19-7Q3SYF9 63 aa4.47□□□□□ -1.69
CACNA1A-201ENST00000360228 KRTAP9-7A8MTY7 169 aa4.47□□□□□ -1.69
CACNA1A-201ENST00000360228 KRTAP9-4Q9BYQ2 154 aa4.43□□□□□ -1.7
CACNA1A-201ENST00000360228 KRTAP9-6A0A140TA67 174 aa4.42□□□□□ -1.7
CACNA1A-201ENST00000360228 KRTAP19-2Q3LHN2 52 aa4.41□□□□□ -1.7
CACNA1A-201ENST00000360228 KMT2CQ8NEZ4 4911 aaKnown RBP4.39□□□□□ -1.71
CACNA1A-201ENST00000360228 KRTAP2-2Q9BYT5 123 aa4.36□□□□□ -1.71
CACNA1A-201ENST00000360228 HYDINQ4G0P3 5121 aa4.27□□□□□ -1.73
CACNA1A-201ENST00000360228 KRTAP9-9Q9BYP9 154 aa4.22□□□□□ -1.73
CACNA1A-201ENST00000360228 LCE2AQ5TA79 106 aaPredicted RBP4.21□□□□□ -1.74
CACNA1A-201ENST00000360228 KRTAP9-6A8MVA2 160 aa4.18□□□□□ -1.74
CACNA1A-201ENST00000360228 SYNE1Q8NF91 8797 aaKnown RBP4.16□□□□□ -1.74
CACNA1A-201ENST00000360228 KRTAP4-11Q9BYQ6 195 aa4.1□□□□□ -1.75
CACNA1A-201ENST00000360228 KRTAP6-3Q3LI67 103 aa4.1□□□□□ -1.75
CACNA1A-201ENST00000360228 BIRC6Q9NR09 4857 aa4.07□□□□□ -1.76
CACNA1A-201ENST00000360228 HERC2O95714 4834 aa4.04□□□□□ -1.76
CACNA1A-201ENST00000360228 KIAA1109Q2LD37 5005 aa4.02□□□□□ -1.77
CACNA1A-201ENST00000360228 RYR2Q92736 4967 aa3.99□□□□□ -1.77
CACNA1A-201ENST00000360228 KRTAP20-2Q3LI61 65 aa3.98□□□□□ -1.77
CACNA1A-201ENST00000360228 PCLOQ9Y6V0 5065 aa3.97□□□□□ -1.77
CACNA1A-201ENST00000360228 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.96□□□□□ -1.78
CACNA1A-201ENST00000360228 FSIP2Q5CZC0 6907 aa3.94□□□□□ -1.78
CACNA1A-201ENST00000360228 HMCN2Q8NDA2 5059 aa3.91□□□□□ -1.78
CACNA1A-201ENST00000360228 HERC1Q15751 4861 aa3.8□□□□□ -1.8
CACNA1A-201ENST00000360228 KRTAP4-4Q9BYR3 166 aa3.77□□□□□ -1.81
CACNA1A-201ENST00000360228 KRTAP4-6Q9BYQ5 205 aa3.64□□□□□ -1.83
CACNA1A-201ENST00000360228 MUC2Q02817 5179 aa3.6□□□□□ -1.83
CACNA1A-201ENST00000360228 KRTAP4-12Q9BQ66 201 aa3.6□□□□□ -1.83
CACNA1A-201ENST00000360228 KRTAP4-2Q9BYR5 136 aa3.6□□□□□ -1.83
CACNA1A-201ENST00000360228 OBSCNQ5VST9 7968 aa3.46□□□□□ -1.86
CACNA1A-201ENST00000360228 UBR4Q5T4S7 5183 aa3.45□□□□□ -1.86
CACNA1A-201ENST00000360228 KMT2DO14686 5537 aa3.45□□□□□ -1.86
CACNA1A-201ENST00000360228 EPPK1P58107 5090 aaKnown RBP3.45□□□□□ -1.86
CACNA1A-201ENST00000360228 FAT4Q6V0I7 4981 aa3.41□□□□□ -1.86
CACNA1A-201ENST00000360228 DSTQ03001 7570 aaKnown RBP3.35□□□□□ -1.87
CACNA1A-201ENST00000360228 ABCA13Q86UQ4 5058 aa3.34□□□□□ -1.87
CACNA1A-201ENST00000360228 RNF213Q63HN8 5207 aa3.3□□□□□ -1.88
CACNA1A-201ENST00000360228 MACF1Q9UPN3 7388 aaKnown RBP3.29□□□□□ -1.88
CACNA1A-201ENST00000360228 KRTAP5-9P26371 169 aa3.23□□□□□ -1.89
CACNA1A-201ENST00000360228 KRTAP5-5Q701N2 237 aaPredicted RBP3.2□□□□□ -1.9
CACNA1A-201ENST00000360228 FCGBPQ9Y6R7 5405 aaPredicted RBP3.16□□□□□ -1.9
CACNA1A-201ENST00000360228 KRTAP5-4Q6L8H1 288 aa3.12□□□□□ -1.91
CACNA1A-201ENST00000360228 MUC19Q7Z5P9 8384 aa3.09□□□□□ -1.91
CACNA1A-201ENST00000360228 NEBP20929 6669 aa3.08□□□□□ -1.92
CACNA1A-201ENST00000360228 MDN1Q9NU22 5596 aa2.94□□□□□ -1.94
CACNA1A-201ENST00000360228 USH2AO75445 5202 aa2.89□□□□□ -1.95
CACNA1A-201ENST00000360228 SSPOA2VEC9 5147 aa2.79□□□□□ -1.96
CACNA1A-201ENST00000360228 MUC12Q9UKN1 5478 aa2.76□□□□□ -1.97
CACNA1A-201ENST00000360228 GPR98Q8WXG9 6306 aa2.74□□□□□ -1.97
CACNA1A-201ENST00000360228 PHGR1C9JFL3 82 aa2.73□□□□□ -1.97
CACNA1A-201ENST00000360228 KRTAP5-3Q6L8H2 238 aa2.69□□□□□ -1.98
CACNA1A-201ENST00000360228 MUC5ACP98088 5654 aa2.68□□□□□ -1.98
CACNA1A-201ENST00000360228 KRTAP5-10Q6L8G5 202 aa2.64□□□□□ -1.99
CACNA1A-201ENST00000360228 KRTAP5-2Q701N4 177 aa2.47□□□□□ -2.01
CACNA1A-201ENST00000360228 HMCN1Q96RW7 5635 aa2.46□□□□□ -2.02
CACNA1A-201ENST00000360228 MUC5BQ9HC84 5762 aaPredicted RBP2.45□□□□□ -2.02
CACNA1A-201ENST00000360228 KRTAP5-8O75690 187 aa2.44□□□□□ -2.02
CACNA1A-201ENST00000360228 KRTAP5-11Q6L8G4 156 aa2.33□□□□□ -2.04
CACNA1A-201ENST00000360228 KRTAP21-1Q3LI58 79 aa2.3□□□□□ -2.04
CACNA1A-201ENST00000360228 KRTAP5-1Q6L8H4 278 aa2.22□□□□□ -2.05
CACNA1A-201ENST00000360228 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.12□□□□□ -2.07
CACNA1A-201ENST00000360228 AHNAK2Q8IVF2 5795 aa2.06□□□□□ -2.08
CACNA1A-201ENST00000360228 KRTAP21-2Q3LI59 83 aa2.04□□□□□ -2.08
CACNA1A-201ENST00000360228 AHNAKQ09666 5890 aaKnown RBP2.03□□□□□ -2.09
CACNA1A-201ENST00000360228 MUC16Q8WXI7 14507 aa1.82□□□□□ -2.12
CACNA1A-201ENST00000360228 KRTAP5-7Q6L8G8 165 aa1.5□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 97.2 ms