RNA–Protein interactions for RNA: ENST00000360105.8

NFIX-202, Transcript of nuclear factor I X, humanhuman

TSL 5 BASIC

Gene NFIX, Length 5,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-202ENST00000360105 PKHD1P08F94 4074 aa5.88□□□□□ -1.47
NFIX-202ENST00000360105 KMT2CQ8NEZ4 4911 aaKnown RBP5.86□□□□□ -1.47
NFIX-202ENST00000360105 LPAP08519 4548 aa5.84□□□□□ -1.48
NFIX-202ENST00000360105 KRTAP9-7A8MTY7 169 aa5.83□□□□□ -1.48
NFIX-202ENST00000360105 LOC100996750A0A140TA64 210 aa5.81□□□□□ -1.48
NFIX-202ENST00000360105 HYDINQ4G0P3 5121 aa5.81□□□□□ -1.48
NFIX-202ENST00000360105 FLGP20930 4061 aaPredicted RBP5.81□□□□□ -1.48
NFIX-202ENST00000360105 MT1AP04731 61 aa5.79□□□□□ -1.48
NFIX-202ENST00000360105 KRTAP4-3Q9BYR4 195 aa5.79□□□□□ -1.48
NFIX-202ENST00000360105 KRTAP6-3Q3LI67 103 aa5.77□□□□□ -1.49
NFIX-202ENST00000360105 SYNE1Q8NF91 8797 aaKnown RBP5.72□□□□□ -1.49
NFIX-202ENST00000360105 KRTAP2-3P0C7H8 128 aa5.72□□□□□ -1.49
NFIX-202ENST00000360105 KRTAP2-4Q9BYR9 128 aa5.72□□□□□ -1.49
NFIX-202ENST00000360105 ABCA13Q86UQ4 5058 aa5.72□□□□□ -1.49
NFIX-202ENST00000360105 TNXBP22105 4242 aa5.72□□□□□ -1.49
NFIX-202ENST00000360105 PRM1P04553 51 aa5.71□□□□□ -1.49
NFIX-202ENST00000360105 LCE1AQ5T7P2 110 aa5.71□□□□□ -1.5
NFIX-202ENST00000360105 LCE5AQ5TCM9 118 aa5.66□□□□□ -1.5
NFIX-202ENST00000360105 KRTAP19-7Q3SYF9 63 aa5.65□□□□□ -1.5
NFIX-202ENST00000360105 LCE4AQ5TA78 99 aa5.56□□□□□ -1.52
NFIX-202ENST00000360105 RNF213Q63HN8 5207 aa5.56□□□□□ -1.52
NFIX-202ENST00000360105 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.53□□□□□ -1.52
NFIX-202ENST00000360105 KRTAP2-1Q9BYU5 128 aa5.52□□□□□ -1.53
NFIX-202ENST00000360105 KRTAP2-2Q9BYT5 123 aa5.5□□□□□ -1.53
NFIX-202ENST00000360105 FAT4Q6V0I7 4981 aa5.46□□□□□ -1.53
NFIX-202ENST00000360105 SYNE2Q8WXH0 6885 aaKnown RBP5.41□□□□□ -1.54
NFIX-202ENST00000360105 UBR4Q5T4S7 5183 aa5.39□□□□□ -1.55
NFIX-202ENST00000360105 KRTAP9-4Q9BYQ2 154 aa5.34□□□□□ -1.56
NFIX-202ENST00000360105 KRTAP4-9Q9BYQ8 210 aa5.34□□□□□ -1.56
NFIX-202ENST00000360105 KRTAP6-2Q3LI66 62 aa5.31□□□□□ -1.56
NFIX-202ENST00000360105 KRTAP6-1Q3LI64 71 aa5.27□□□□□ -1.57
NFIX-202ENST00000360105 HMCN2Q8NDA2 5059 aa5.24□□□□□ -1.57
NFIX-202ENST00000360105 LCE1CQ5T751 118 aa5.19□□□□□ -1.58
NFIX-202ENST00000360105 LCE1EQ5T753 118 aa5.19□□□□□ -1.58
NFIX-202ENST00000360105 LCE1FQ5T754 118 aa5.19□□□□□ -1.58
NFIX-202ENST00000360105 FSIP2Q5CZC0 6907 aa5.17□□□□□ -1.58
NFIX-202ENST00000360105 MUC2Q02817 5179 aa5.17□□□□□ -1.58
NFIX-202ENST00000360105 OBSCNQ5VST9 7968 aa5.02□□□□□ -1.61
NFIX-202ENST00000360105 KRTAP9-9Q9BYP9 154 aa4.94□□□□□ -1.62
NFIX-202ENST00000360105 KRTAP9-6A8MVA2 160 aa4.9□□□□□ -1.62
NFIX-202ENST00000360105 KRTAP5-9P26371 169 aa4.68□□□□□ -1.66
NFIX-202ENST00000360105 NEBP20929 6669 aa4.62□□□□□ -1.67
NFIX-202ENST00000360105 FCGBPQ9Y6R7 5405 aaPredicted RBP4.57□□□□□ -1.68
NFIX-202ENST00000360105 USH2AO75445 5202 aa4.48□□□□□ -1.69
NFIX-202ENST00000360105 KRTAP20-2Q3LI61 65 aa4.47□□□□□ -1.69
NFIX-202ENST00000360105 KRTAP4-6Q9BYQ5 205 aa4.44□□□□□ -1.7
NFIX-202ENST00000360105 SSPOA2VEC9 5147 aa4.4□□□□□ -1.7
NFIX-202ENST00000360105 DSTQ03001 7570 aaKnown RBP4.38□□□□□ -1.71
NFIX-202ENST00000360105 MUC19Q7Z5P9 8384 aa4.34□□□□□ -1.72
NFIX-202ENST00000360105 KMT2DO14686 5537 aa4.26□□□□□ -1.73
NFIX-202ENST00000360105 KRTAP5-4Q6L8H1 288 aa4.24□□□□□ -1.73
NFIX-202ENST00000360105 MACF1Q9UPN3 7388 aaKnown RBP4.24□□□□□ -1.73
NFIX-202ENST00000360105 KRTAP4-11Q9BYQ6 195 aa4.17□□□□□ -1.74
NFIX-202ENST00000360105 GPR98Q8WXG9 6306 aa4.15□□□□□ -1.74
NFIX-202ENST00000360105 MDN1Q9NU22 5596 aa4.04□□□□□ -1.76
NFIX-202ENST00000360105 KRTAP4-12Q9BQ66 201 aa4.03□□□□□ -1.76
NFIX-202ENST00000360105 KRTAP4-2Q9BYR5 136 aa4.03□□□□□ -1.76
NFIX-202ENST00000360105 KRTAP4-4Q9BYR3 166 aa3.98□□□□□ -1.77
NFIX-202ENST00000360105 MUC12Q9UKN1 5478 aa3.95□□□□□ -1.78
NFIX-202ENST00000360105 KRTAP5-5Q701N2 237 aaPredicted RBP3.71□□□□□ -1.82
NFIX-202ENST00000360105 KRTAP5-3Q6L8H2 238 aa3.7□□□□□ -1.82
NFIX-202ENST00000360105 AHNAK2Q8IVF2 5795 aa3.52□□□□□ -1.85
NFIX-202ENST00000360105 MUC5ACP98088 5654 aa3.41□□□□□ -1.86
NFIX-202ENST00000360105 KRTAP5-8O75690 187 aa3.35□□□□□ -1.87
NFIX-202ENST00000360105 HMCN1Q96RW7 5635 aa3.26□□□□□ -1.89
NFIX-202ENST00000360105 PHGR1C9JFL3 82 aa3.23□□□□□ -1.89
NFIX-202ENST00000360105 KRTAP5-2Q701N4 177 aa3.08□□□□□ -1.92
NFIX-202ENST00000360105 KRTAP5-10Q6L8G5 202 aa3□□□□□ -1.93
NFIX-202ENST00000360105 MUC5BQ9HC84 5762 aaPredicted RBP2.97□□□□□ -1.93
NFIX-202ENST00000360105 KRTAP5-11Q6L8G4 156 aa2.89□□□□□ -1.95
NFIX-202ENST00000360105 AHNAKQ09666 5890 aaKnown RBP2.81□□□□□ -1.96
NFIX-202ENST00000360105 KRTAP5-1Q6L8H4 278 aa2.72□□□□□ -1.97
NFIX-202ENST00000360105 KRTAP21-2Q3LI59 83 aa2.56□□□□□ -2
NFIX-202ENST00000360105 KRTAP5-7Q6L8G8 165 aa2.51□□□□□ -2.01
NFIX-202ENST00000360105 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.44□□□□□ -2.02
NFIX-202ENST00000360105 KRTAP21-1Q3LI58 79 aa2.3□□□□□ -2.04
NFIX-202ENST00000360105 MUC16Q8WXI7 14507 aa1.79□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 5.8 ms