RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 KRTAP19-6Q3LI70 58 aa3.32□□□□□ -1.88
SPTBN1-202ENST00000356805 RYR2Q92736 4967 aa3.32□□□□□ -1.88
SPTBN1-202ENST00000356805 LRP2P98164 4655 aa3.28□□□□□ -1.88
SPTBN1-202ENST00000356805 SYNE2Q8WXH0 6885 aaKnown RBP3.28□□□□□ -1.88
SPTBN1-202ENST00000356805 SYNE1Q8NF91 8797 aaKnown RBP3.27□□□□□ -1.89
SPTBN1-202ENST00000356805 LCE1CQ5T751 118 aa3.26□□□□□ -1.89
SPTBN1-202ENST00000356805 LCE1EQ5T753 118 aa3.26□□□□□ -1.89
SPTBN1-202ENST00000356805 LCE1FQ5T754 118 aa3.26□□□□□ -1.89
SPTBN1-202ENST00000356805 LCE1AQ5T7P2 110 aa3.26□□□□□ -1.89
SPTBN1-202ENST00000356805 MUC17Q685J3 4493 aa3.26□□□□□ -1.89
SPTBN1-202ENST00000356805 KRTAP20-1Q3LI63 56 aa3.23□□□□□ -1.89
SPTBN1-202ENST00000356805 KRTAP19-7Q3SYF9 63 aa3.23□□□□□ -1.89
SPTBN1-202ENST00000356805 KMT2CQ8NEZ4 4911 aaKnown RBP3.2□□□□□ -1.9
SPTBN1-202ENST00000356805 PCLOQ9Y6V0 5065 aa3.19□□□□□ -1.9
SPTBN1-202ENST00000356805 HERC1Q15751 4861 aa3.18□□□□□ -1.9
SPTBN1-202ENST00000356805 KIAA1109Q2LD37 5005 aa3.18□□□□□ -1.9
SPTBN1-202ENST00000356805 HYDINQ4G0P3 5121 aa3.18□□□□□ -1.9
SPTBN1-202ENST00000356805 BIRC6Q9NR09 4857 aa3.15□□□□□ -1.91
SPTBN1-202ENST00000356805 KRTAP9-6A0A140TA67 174 aa3.14□□□□□ -1.91
SPTBN1-202ENST00000356805 HERC2O95714 4834 aa3.14□□□□□ -1.91
SPTBN1-202ENST00000356805 KRTAP6-2Q3LI66 62 aa3.13□□□□□ -1.91
SPTBN1-202ENST00000356805 KRTAP9-6A8MVA2 160 aa3.03□□□□□ -1.92
SPTBN1-202ENST00000356805 KRTAP6-1Q3LI64 71 aa3.02□□□□□ -1.93
SPTBN1-202ENST00000356805 KRTAP9-7A8MTY7 169 aa3.01□□□□□ -1.93
SPTBN1-202ENST00000356805 KRTAP9-4Q9BYQ2 154 aa2.98□□□□□ -1.93
SPTBN1-202ENST00000356805 EPPK1P58107 5090 aaKnown RBP2.97□□□□□ -1.93
SPTBN1-202ENST00000356805 LCE4AQ5TA78 99 aa2.94□□□□□ -1.94
SPTBN1-202ENST00000356805 KRTAP2-2Q9BYT5 123 aa2.91□□□□□ -1.94
SPTBN1-202ENST00000356805 KRTAP6-3Q3LI67 103 aa2.85□□□□□ -1.95
SPTBN1-202ENST00000356805 ABCA13Q86UQ4 5058 aa2.84□□□□□ -1.95
SPTBN1-202ENST00000356805 LCE2AQ5TA79 106 aaPredicted RBP2.84□□□□□ -1.96
SPTBN1-202ENST00000356805 KRTAP9-9Q9BYP9 154 aa2.83□□□□□ -1.96
SPTBN1-202ENST00000356805 HMCN2Q8NDA2 5059 aa2.82□□□□□ -1.96
SPTBN1-202ENST00000356805 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.8□□□□□ -1.96
SPTBN1-202ENST00000356805 RNF213Q63HN8 5207 aa2.8□□□□□ -1.96
SPTBN1-202ENST00000356805 UBR4Q5T4S7 5183 aa2.8□□□□□ -1.96
SPTBN1-202ENST00000356805 OBSCNQ5VST9 7968 aa2.78□□□□□ -1.96
SPTBN1-202ENST00000356805 KRTAP4-11Q9BYQ6 195 aa2.7□□□□□ -1.98
SPTBN1-202ENST00000356805 FSIP2Q5CZC0 6907 aa2.7□□□□□ -1.98
SPTBN1-202ENST00000356805 KRTAP20-2Q3LI61 65 aa2.66□□□□□ -1.98
SPTBN1-202ENST00000356805 MUC2Q02817 5179 aa2.65□□□□□ -1.99
SPTBN1-202ENST00000356805 FAT4Q6V0I7 4981 aa2.62□□□□□ -1.99
SPTBN1-202ENST00000356805 KRTAP4-4Q9BYR3 166 aa2.54□□□□□ -2
SPTBN1-202ENST00000356805 KRTAP4-6Q9BYQ5 205 aa2.5□□□□□ -2.01
SPTBN1-202ENST00000356805 KRTAP4-12Q9BQ66 201 aa2.47□□□□□ -2.01
SPTBN1-202ENST00000356805 KRTAP4-2Q9BYR5 136 aa2.47□□□□□ -2.01
SPTBN1-202ENST00000356805 FCGBPQ9Y6R7 5405 aaPredicted RBP2.46□□□□□ -2.02
SPTBN1-202ENST00000356805 USH2AO75445 5202 aa2.4□□□□□ -2.03
SPTBN1-202ENST00000356805 KRTAP5-5Q701N2 237 aaPredicted RBP2.36□□□□□ -2.03
SPTBN1-202ENST00000356805 KMT2DO14686 5537 aa2.34□□□□□ -2.04
SPTBN1-202ENST00000356805 KRTAP5-9P26371 169 aa2.33□□□□□ -2.04
SPTBN1-202ENST00000356805 DSTQ03001 7570 aaKnown RBP2.33□□□□□ -2.04
SPTBN1-202ENST00000356805 MUC19Q7Z5P9 8384 aa2.32□□□□□ -2.04
SPTBN1-202ENST00000356805 MUC12Q9UKN1 5478 aa2.31□□□□□ -2.04
SPTBN1-202ENST00000356805 MDN1Q9NU22 5596 aa2.25□□□□□ -2.05
SPTBN1-202ENST00000356805 NEBP20929 6669 aa2.22□□□□□ -2.05
SPTBN1-202ENST00000356805 MACF1Q9UPN3 7388 aaKnown RBP2.18□□□□□ -2.06
SPTBN1-202ENST00000356805 KRTAP5-4Q6L8H1 288 aa2.15□□□□□ -2.07
SPTBN1-202ENST00000356805 SSPOA2VEC9 5147 aa2.07□□□□□ -2.08
SPTBN1-202ENST00000356805 GPR98Q8WXG9 6306 aa1.95□□□□□ -2.1
SPTBN1-202ENST00000356805 KRTAP5-10Q6L8G5 202 aa1.89□□□□□ -2.11
SPTBN1-202ENST00000356805 PHGR1C9JFL3 82 aa1.87□□□□□ -2.11
SPTBN1-202ENST00000356805 KRTAP5-3Q6L8H2 238 aa1.85□□□□□ -2.11
SPTBN1-202ENST00000356805 MUC5ACP98088 5654 aa1.81□□□□□ -2.12
SPTBN1-202ENST00000356805 HMCN1Q96RW7 5635 aa1.77□□□□□ -2.13
SPTBN1-202ENST00000356805 AHNAK2Q8IVF2 5795 aa1.74□□□□□ -2.13
SPTBN1-202ENST00000356805 KRTAP5-8O75690 187 aa1.72□□□□□ -2.13
SPTBN1-202ENST00000356805 KRTAP5-2Q701N4 177 aa1.68□□□□□ -2.14
SPTBN1-202ENST00000356805 MUC5BQ9HC84 5762 aaPredicted RBP1.68□□□□□ -2.14
SPTBN1-202ENST00000356805 KRTAP21-1Q3LI58 79 aa1.63□□□□□ -2.15
SPTBN1-202ENST00000356805 KRTAP5-11Q6L8G4 156 aa1.63□□□□□ -2.15
SPTBN1-202ENST00000356805 KRTAP5-1Q6L8H4 278 aa1.55□□□□□ -2.16
SPTBN1-202ENST00000356805 KRTAP21-2Q3LI59 83 aa1.51□□□□□ -2.17
SPTBN1-202ENST00000356805 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.5□□□□□ -2.17
SPTBN1-202ENST00000356805 AHNAKQ09666 5890 aaKnown RBP1.48□□□□□ -2.17
SPTBN1-202ENST00000356805 KRTAP5-7Q6L8G8 165 aa1.2□□□□□ -2.22
SPTBN1-202ENST00000356805 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 86.9 ms