RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 LCE1DQ5T752 114 aa3.4□□□□□ -1.87
FN1-204ENST00000356005 HYDINQ4G0P3 5121 aa3.38□□□□□ -1.87
FN1-204ENST00000356005 LCE1BQ5T7P3 118 aa3.38□□□□□ -1.87
FN1-204ENST00000356005 KRTAP4-7Q9BYR0 210 aa3.37□□□□□ -1.87
FN1-204ENST00000356005 HERC2O95714 4834 aa3.36□□□□□ -1.87
FN1-204ENST00000356005 LCE4AQ5TA78 99 aa3.35□□□□□ -1.87
FN1-204ENST00000356005 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.31□□□□□ -1.88
FN1-204ENST00000356005 MT1AP04731 61 aa3.3□□□□□ -1.88
FN1-204ENST00000356005 KRTAP2-2Q9BYT5 123 aa3.29□□□□□ -1.88
FN1-204ENST00000356005 KRTAP2-1Q9BYU5 128 aa3.29□□□□□ -1.88
FN1-204ENST00000356005 LOC100996750A0A140TA64 210 aa3.26□□□□□ -1.89
FN1-204ENST00000356005 LCE5AQ5TCM9 118 aa3.25□□□□□ -1.89
FN1-204ENST00000356005 PCLOQ9Y6V0 5065 aa3.25□□□□□ -1.89
FN1-204ENST00000356005 KMT2CQ8NEZ4 4911 aaKnown RBP3.24□□□□□ -1.89
FN1-204ENST00000356005 KRTAP19-7Q3SYF9 63 aa3.24□□□□□ -1.89
FN1-204ENST00000356005 KRTAP4-3Q9BYR4 195 aa3.23□□□□□ -1.89
FN1-204ENST00000356005 KIAA1109Q2LD37 5005 aa3.23□□□□□ -1.89
FN1-204ENST00000356005 PRM1P04553 51 aa3.21□□□□□ -1.9
FN1-204ENST00000356005 HERC1Q15751 4861 aa3.16□□□□□ -1.9
FN1-204ENST00000356005 BIRC6Q9NR09 4857 aa3.15□□□□□ -1.9
FN1-204ENST00000356005 SYNE2Q8WXH0 6885 aaKnown RBP3.12□□□□□ -1.91
FN1-204ENST00000356005 KRTAP9-4Q9BYQ2 154 aa3.09□□□□□ -1.91
FN1-204ENST00000356005 KRTAP6-2Q3LI66 62 aa3.06□□□□□ -1.92
FN1-204ENST00000356005 HMCN2Q8NDA2 5059 aa3.06□□□□□ -1.92
FN1-204ENST00000356005 KRTAP4-9Q9BYQ8 210 aa3.06□□□□□ -1.92
FN1-204ENST00000356005 LCE1CQ5T751 118 aa3□□□□□ -1.93
FN1-204ENST00000356005 LCE1EQ5T753 118 aa3□□□□□ -1.93
FN1-204ENST00000356005 LCE1FQ5T754 118 aa3□□□□□ -1.93
FN1-204ENST00000356005 KRTAP9-9Q9BYP9 154 aa2.99□□□□□ -1.93
FN1-204ENST00000356005 KRTAP6-1Q3LI64 71 aa2.99□□□□□ -1.93
FN1-204ENST00000356005 KRTAP5-9P26371 169 aa2.84□□□□□ -1.95
FN1-204ENST00000356005 FSIP2Q5CZC0 6907 aa2.82□□□□□ -1.96
FN1-204ENST00000356005 EPPK1P58107 5090 aaKnown RBP2.81□□□□□ -1.96
FN1-204ENST00000356005 FAT4Q6V0I7 4981 aa2.8□□□□□ -1.96
FN1-204ENST00000356005 KRTAP9-6A8MVA2 160 aa2.74□□□□□ -1.97
FN1-204ENST00000356005 SYNE1Q8NF91 8797 aaKnown RBP2.73□□□□□ -1.97
FN1-204ENST00000356005 RNF213Q63HN8 5207 aa2.72□□□□□ -1.97
FN1-204ENST00000356005 MUC2Q02817 5179 aa2.66□□□□□ -1.98
FN1-204ENST00000356005 ABCA13Q86UQ4 5058 aa2.65□□□□□ -1.98
FN1-204ENST00000356005 KRTAP20-2Q3LI61 65 aa2.61□□□□□ -1.99
FN1-204ENST00000356005 KRTAP4-6Q9BYQ5 205 aa2.59□□□□□ -2
FN1-204ENST00000356005 UBR4Q5T4S7 5183 aa2.58□□□□□ -2
FN1-204ENST00000356005 KRTAP5-4Q6L8H1 288 aa2.56□□□□□ -2
FN1-204ENST00000356005 OBSCNQ5VST9 7968 aa2.5□□□□□ -2.01
FN1-204ENST00000356005 NEBP20929 6669 aa2.48□□□□□ -2.01
FN1-204ENST00000356005 KRTAP4-11Q9BYQ6 195 aa2.42□□□□□ -2.02
FN1-204ENST00000356005 MACF1Q9UPN3 7388 aaKnown RBP2.38□□□□□ -2.03
FN1-204ENST00000356005 DSTQ03001 7570 aaKnown RBP2.36□□□□□ -2.03
FN1-204ENST00000356005 KMT2DO14686 5537 aa2.31□□□□□ -2.04
FN1-204ENST00000356005 KRTAP4-12Q9BQ66 201 aa2.24□□□□□ -2.05
FN1-204ENST00000356005 KRTAP4-2Q9BYR5 136 aa2.24□□□□□ -2.05
FN1-204ENST00000356005 SSPOA2VEC9 5147 aa2.23□□□□□ -2.05
FN1-204ENST00000356005 KRTAP5-5Q701N2 237 aaPredicted RBP2.22□□□□□ -2.05
FN1-204ENST00000356005 KRTAP5-3Q6L8H2 238 aa2.2□□□□□ -2.06
FN1-204ENST00000356005 FCGBPQ9Y6R7 5405 aaPredicted RBP2.19□□□□□ -2.06
FN1-204ENST00000356005 KRTAP4-4Q9BYR3 166 aa2.19□□□□□ -2.06
FN1-204ENST00000356005 USH2AO75445 5202 aa2.05□□□□□ -2.08
FN1-204ENST00000356005 MDN1Q9NU22 5596 aa2.04□□□□□ -2.08
FN1-204ENST00000356005 MUC19Q7Z5P9 8384 aa2□□□□□ -2.09
FN1-204ENST00000356005 MUC5ACP98088 5654 aa2□□□□□ -2.09
FN1-204ENST00000356005 MUC12Q9UKN1 5478 aa1.99□□□□□ -2.09
FN1-204ENST00000356005 KRTAP5-8O75690 187 aa1.96□□□□□ -2.1
FN1-204ENST00000356005 GPR98Q8WXG9 6306 aa1.94□□□□□ -2.1
FN1-204ENST00000356005 PHGR1C9JFL3 82 aa1.91□□□□□ -2.1
FN1-204ENST00000356005 KRTAP5-2Q701N4 177 aa1.88□□□□□ -2.11
FN1-204ENST00000356005 KRTAP5-11Q6L8G4 156 aa1.75□□□□□ -2.13
FN1-204ENST00000356005 KRTAP5-10Q6L8G5 202 aa1.73□□□□□ -2.13
FN1-204ENST00000356005 MUC5BQ9HC84 5762 aaPredicted RBP1.69□□□□□ -2.14
FN1-204ENST00000356005 HMCN1Q96RW7 5635 aa1.64□□□□□ -2.15
FN1-204ENST00000356005 KRTAP5-1Q6L8H4 278 aa1.6□□□□□ -2.15
FN1-204ENST00000356005 KRTAP5-7Q6L8G8 165 aa1.6□□□□□ -2.15
FN1-204ENST00000356005 AHNAK2Q8IVF2 5795 aa1.59□□□□□ -2.15
FN1-204ENST00000356005 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.53□□□□□ -2.17
FN1-204ENST00000356005 KRTAP21-2Q3LI59 83 aa1.5□□□□□ -2.17
FN1-204ENST00000356005 AHNAKQ09666 5890 aaKnown RBP1.44□□□□□ -2.18
FN1-204ENST00000356005 KRTAP21-1Q3LI58 79 aa1.42□□□□□ -2.18
FN1-204ENST00000356005 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 263 ms