RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 KRTAP19-3Q7Z4W3 81 aa5.93□□□□□ -1.46
PDGFA-201ENST00000354513 K7ERS5 55 aa5.89□□□□□ -1.47
PDGFA-201ENST00000354513 KRTAP4-12Q9BQ66 201 aa5.85□□□□□ -1.47
PDGFA-201ENST00000354513 CDC42SE1Q9NRR8 79 aa5.85□□□□□ -1.47
PDGFA-201ENST00000354513 SVIPQ8NHG7 77 aa5.8□□□□□ -1.48
PDGFA-201ENST00000354513 LCE1DQ5T752 114 aa5.79□□□□□ -1.48
PDGFA-201ENST00000354513 KRTAP9-9Q9BYP9 154 aa5.79□□□□□ -1.48
PDGFA-201ENST00000354513 KRTAP9-4Q9BYQ2 154 aa5.79□□□□□ -1.48
PDGFA-201ENST00000354513 C10orf95Q9H7T3 257 aa5.77□□□□□ -1.49
PDGFA-201ENST00000354513 KRTAP19-5Q3LI72 72 aa5.75□□□□□ -1.49
PDGFA-201ENST00000354513 MT1GP13640 62 aa5.73□□□□□ -1.49
PDGFA-201ENST00000354513 HMCN1Q96RW7 5635 aa5.69□□□□□ -1.5
PDGFA-201ENST00000354513 MT1MQ8N339 61 aa5.69□□□□□ -1.5
PDGFA-201ENST00000354513 TNP1P09430 55 aa5.68□□□□□ -1.5
PDGFA-201ENST00000354513 LCE4AQ5TA78 99 aa5.68□□□□□ -1.5
PDGFA-201ENST00000354513 BRK1Q8WUW1 75 aa5.68□□□□□ -1.5
PDGFA-201ENST00000354513 MT4P47944 62 aa5.66□□□□□ -1.5
PDGFA-201ENST00000354513 MT1LQ93083 61 aa5.64□□□□□ -1.51
PDGFA-201ENST00000354513 AHNAK2Q8IVF2 5795 aa5.63□□□□□ -1.51
PDGFA-201ENST00000354513 PP632Q6XCG6 107 aa5.62□□□□□ -1.51
PDGFA-201ENST00000354513 KRTAP4-3Q9BYR4 195 aa5.6□□□□□ -1.51
PDGFA-201ENST00000354513 KRTAP5-4Q6L8H1 288 aa5.59□□□□□ -1.51
PDGFA-201ENST00000354513 KRTAP25-1Q3LHN0 102 aa5.57□□□□□ -1.52
PDGFA-201ENST00000354513 ROMO1P60602 79 aa5.56□□□□□ -1.52
PDGFA-201ENST00000354513 KRTAP4-7Q9BYR0 210 aa5.56□□□□□ -1.52
PDGFA-201ENST00000354513 H3BS24 57 aa5.54□□□□□ -1.52
PDGFA-201ENST00000354513 KRTAP5-10Q6L8G5 202 aa5.53□□□□□ -1.52
PDGFA-201ENST00000354513 LCE3AQ5TA76 89 aa5.5□□□□□ -1.53
PDGFA-201ENST00000354513 KRTAP23-1A1A580 65 aa5.36□□□□□ -1.55
PDGFA-201ENST00000354513 PMAIP1Q13794 54 aa5.36□□□□□ -1.55
PDGFA-201ENST00000354513 PRO0628Q9UI54 55 aa5.34□□□□□ -1.55
PDGFA-201ENST00000354513 KRTAP5-7Q6L8G8 165 aa5.33□□□□□ -1.56
PDGFA-201ENST00000354513 KRTAP5-3Q6L8H2 238 aa5.33□□□□□ -1.56
PDGFA-201ENST00000354513 KRTAP4-2Q9BYR5 136 aa5.33□□□□□ -1.56
PDGFA-201ENST00000354513 KRTAP12-3P60328 96 aa5.29□□□□□ -1.56
PDGFA-201ENST00000354513 KRTAP20-2Q3LI61 65 aa5.28□□□□□ -1.56
PDGFA-201ENST00000354513 KRTAP5-5Q701N2 237 aaPredicted RBP5.28□□□□□ -1.56
PDGFA-201ENST00000354513 SPRR5A0A1B0GTR4 108 aa5.19□□□□□ -1.58
PDGFA-201ENST00000354513 KRTAP4-11Q9BYQ6 195 aa5.16□□□□□ -1.58
PDGFA-201ENST00000354513 SYNE1Q8NF91 8797 aaKnown RBP5.14□□□□□ -1.59
PDGFA-201ENST00000354513 KRTAP15-1Q3LI76 137 aa5.09□□□□□ -1.59
PDGFA-201ENST00000354513 PRAC1Q96KF2 57 aa5.07□□□□□ -1.6
PDGFA-201ENST00000354513 KRTAP12-4P60329 112 aa5.06□□□□□ -1.6
PDGFA-201ENST00000354513 KRTAP19-4Q3LI73 84 aa5.03□□□□□ -1.6
PDGFA-201ENST00000354513 KTN1-AS1Q86SY8 53 aa5□□□□□ -1.61
PDGFA-201ENST00000354513 LCE3CQ5T5A8 94 aa4.92□□□□□ -1.62
PDGFA-201ENST00000354513 KRTAP5-2Q701N4 177 aa4.88□□□□□ -1.63
PDGFA-201ENST00000354513 KRTAP6-1Q3LI64 71 aa4.8□□□□□ -1.64
PDGFA-201ENST00000354513 MT1AP04731 61 aa4.78□□□□□ -1.64
PDGFA-201ENST00000354513 KRTAP5-8O75690 187 aa4.74□□□□□ -1.65
PDGFA-201ENST00000354513 KRTAP9-6A8MVA2 160 aa4.65□□□□□ -1.67
PDGFA-201ENST00000354513 MUC5ACP98088 5654 aa4.65□□□□□ -1.67
PDGFA-201ENST00000354513 AHNAKQ09666 5890 aaKnown RBP4.64□□□□□ -1.67
PDGFA-201ENST00000354513 A0A0A0MQY5 61 aa4.63□□□□□ -1.67
PDGFA-201ENST00000354513 KRTAP6-2Q3LI66 62 aa4.61□□□□□ -1.67
PDGFA-201ENST00000354513 MUC5BQ9HC84 5762 aaPredicted RBP4.6□□□□□ -1.67
PDGFA-201ENST00000354513 OBSCNQ5VST9 7968 aa4.58□□□□□ -1.68
PDGFA-201ENST00000354513 KRTAP5-1Q6L8H4 278 aa4.41□□□□□ -1.7
PDGFA-201ENST00000354513 MT3P25713 68 aa4.33□□□□□ -1.72
PDGFA-201ENST00000354513 LUZP6Q538Z0 58 aa4.21□□□□□ -1.74
PDGFA-201ENST00000354513 LCE1EQ5T753 118 aa4.06□□□□□ -1.76
PDGFA-201ENST00000354513 LCE1BQ5T7P3 118 aa3.84□□□□□ -1.79
PDGFA-201ENST00000354513 NDUFAF8A1L188 74 aa3.82□□□□□ -1.8
PDGFA-201ENST00000354513 LCE1CQ5T751 118 aa3.78□□□□□ -1.8
PDGFA-201ENST00000354513 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.66□□□□□ -1.82
PDGFA-201ENST00000354513 LCE3DQ9BYE3 92 aa3.63□□□□□ -1.83
PDGFA-201ENST00000354513 LCE3EQ5T5B0 92 aa3.49□□□□□ -1.85
PDGFA-201ENST00000354513 KRTAP5-11Q6L8G4 156 aa3.47□□□□□ -1.85
PDGFA-201ENST00000354513 LCE1FQ5T754 118 aa3.39□□□□□ -1.87
PDGFA-201ENST00000354513 PHGR1C9JFL3 82 aa3.19□□□□□ -1.9
PDGFA-201ENST00000354513 KRTAP21-2Q3LI59 83 aa3.19□□□□□ -1.9
PDGFA-201ENST00000354513 INE1O15225 51 aa3.14□□□□□ -1.91
PDGFA-201ENST00000354513 KRTAP4-4Q9BYR3 166 aa3.04□□□□□ -1.92
PDGFA-201ENST00000354513 PRM1P04553 51 aa2.88□□□□□ -1.95
PDGFA-201ENST00000354513 MUC19Q7Z5P9 8384 aa2.86□□□□□ -1.95
PDGFA-201ENST00000354513 KRTAP21-1Q3LI58 79 aa2.4□□□□□ -2.03
PDGFA-201ENST00000354513 MUC16Q8WXI7 14507 aa2.06□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 80.4 ms