RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 KRTAP6-3Q3LI67 103 aa1.64□□□□□ -2.15
SKP1-202ENST00000353411 KRTAP20-1Q3LI63 56 aa1.63□□□□□ -2.15
SKP1-202ENST00000353411 KRTAP9-7A8MTY7 169 aa1.62□□□□□ -2.15
SKP1-202ENST00000353411 PRM1P04553 51 aa1.61□□□□□ -2.15
SKP1-202ENST00000353411 MT1LQ93083 61 aa1.61□□□□□ -2.15
SKP1-202ENST00000353411 KRTAP9-3Q9BYQ3 159 aa1.61□□□□□ -2.15
SKP1-202ENST00000353411 RNF213Q63HN8 5207 aa1.61□□□□□ -2.15
SKP1-202ENST00000353411 MT1BP07438 61 aa1.61□□□□□ -2.15
SKP1-202ENST00000353411 KRTAP2-2Q9BYT5 123 aa1.6□□□□□ -2.15
SKP1-202ENST00000353411 LPAP08519 4548 aa1.6□□□□□ -2.15
SKP1-202ENST00000353411 MT1GP13640 62 aa1.59□□□□□ -2.15
SKP1-202ENST00000353411 KRTAP9-8Q9BYQ0 159 aa1.58□□□□□ -2.16
SKP1-202ENST00000353411 LCE1EQ5T753 118 aa1.57□□□□□ -2.16
SKP1-202ENST00000353411 MT1EP04732 61 aa1.56□□□□□ -2.16
SKP1-202ENST00000353411 LCE1AQ5T7P2 110 aa1.56□□□□□ -2.16
SKP1-202ENST00000353411 MUC2Q02817 5179 aa1.54□□□□□ -2.16
SKP1-202ENST00000353411 KRTAP19-2Q3LHN2 52 aa1.52□□□□□ -2.17
SKP1-202ENST00000353411 KRTAP4-8A0A0G2JLE6 195 aa1.51□□□□□ -2.17
SKP1-202ENST00000353411 LCE1DQ5T752 114 aa1.51□□□□□ -2.17
SKP1-202ENST00000353411 KRTAP4-8Q9BYQ9 185 aa1.51□□□□□ -2.17
SKP1-202ENST00000353411 KRTAP19-3Q7Z4W3 81 aa1.51□□□□□ -2.17
SKP1-202ENST00000353411 NEBP20929 6669 aa1.51□□□□□ -2.17
SKP1-202ENST00000353411 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.51□□□□□ -2.17
SKP1-202ENST00000353411 MT1AP04731 61 aa1.5□□□□□ -2.17
SKP1-202ENST00000353411 KRTAP4-7Q9BYR0 210 aa1.5□□□□□ -2.17
SKP1-202ENST00000353411 FSIP2Q5CZC0 6907 aa1.5□□□□□ -2.17
SKP1-202ENST00000353411 OBSCNQ5VST9 7968 aa1.48□□□□□ -2.17
SKP1-202ENST00000353411 SYNE2Q8WXH0 6885 aaKnown RBP1.47□□□□□ -2.17
SKP1-202ENST00000353411 USH2AO75445 5202 aa1.47□□□□□ -2.17
SKP1-202ENST00000353411 KRTAP9-6A8MVA2 160 aa1.46□□□□□ -2.18
SKP1-202ENST00000353411 MT1MQ8N339 61 aa1.43□□□□□ -2.18
SKP1-202ENST00000353411 KRTAP19-7Q3SYF9 63 aa1.42□□□□□ -2.18
SKP1-202ENST00000353411 LOC100996750A0A140TA64 210 aa1.42□□□□□ -2.18
SKP1-202ENST00000353411 KRTAP9-9Q9BYP9 154 aa1.42□□□□□ -2.18
SKP1-202ENST00000353411 KRTAP6-2Q3LI66 62 aa1.4□□□□□ -2.19
SKP1-202ENST00000353411 SSPOA2VEC9 5147 aa1.39□□□□□ -2.19
SKP1-202ENST00000353411 SYNE1Q8NF91 8797 aaKnown RBP1.37□□□□□ -2.19
SKP1-202ENST00000353411 MT4P47944 62 aa1.36□□□□□ -2.19
SKP1-202ENST00000353411 KRTAP4-9Q9BYQ8 210 aa1.36□□□□□ -2.19
SKP1-202ENST00000353411 KRTAP5-9P26371 169 aa1.36□□□□□ -2.19
SKP1-202ENST00000353411 AHNAKQ09666 5890 aaKnown RBP1.35□□□□□ -2.19
SKP1-202ENST00000353411 GPR98Q8WXG9 6306 aa1.34□□□□□ -2.19
SKP1-202ENST00000353411 KRTAP4-3Q9BYR4 195 aa1.34□□□□□ -2.19
SKP1-202ENST00000353411 KRTAP6-1Q3LI64 71 aa1.28□□□□□ -2.2
SKP1-202ENST00000353411 LCE1BQ5T7P3 118 aa1.27□□□□□ -2.21
SKP1-202ENST00000353411 HMCN1Q96RW7 5635 aa1.26□□□□□ -2.21
SKP1-202ENST00000353411 DSTQ03001 7570 aaKnown RBP1.25□□□□□ -2.21
SKP1-202ENST00000353411 AHNAK2Q8IVF2 5795 aa1.25□□□□□ -2.21
SKP1-202ENST00000353411 MACF1Q9UPN3 7388 aaKnown RBP1.24□□□□□ -2.21
SKP1-202ENST00000353411 KMT2DO14686 5537 aa1.24□□□□□ -2.21
SKP1-202ENST00000353411 LCE1CQ5T751 118 aa1.23□□□□□ -2.21
SKP1-202ENST00000353411 MUC12Q9UKN1 5478 aa1.21□□□□□ -2.22
SKP1-202ENST00000353411 FCGBPQ9Y6R7 5405 aaPredicted RBP1.21□□□□□ -2.22
SKP1-202ENST00000353411 KRTAP5-4Q6L8H1 288 aa1.21□□□□□ -2.22
SKP1-202ENST00000353411 KRTAP5-5Q701N2 237 aaPredicted RBP1.19□□□□□ -2.22
SKP1-202ENST00000353411 KRTAP4-12Q9BQ66 201 aa1.18□□□□□ -2.22
SKP1-202ENST00000353411 KRTAP4-11Q9BYQ6 195 aa1.14□□□□□ -2.23
SKP1-202ENST00000353411 MDN1Q9NU22 5596 aa1.12□□□□□ -2.23
SKP1-202ENST00000353411 KRTAP20-2Q3LI61 65 aa1.11□□□□□ -2.23
SKP1-202ENST00000353411 MUC5BQ9HC84 5762 aaPredicted RBP1.1□□□□□ -2.23
SKP1-202ENST00000353411 KRTAP5-3Q6L8H2 238 aa1.05□□□□□ -2.24
SKP1-202ENST00000353411 MUC5ACP98088 5654 aa1.05□□□□□ -2.24
SKP1-202ENST00000353411 MUC19Q7Z5P9 8384 aa0.98□□□□□ -2.25
SKP1-202ENST00000353411 KRTAP4-6Q9BYQ5 205 aa0.98□□□□□ -2.25
SKP1-202ENST00000353411 KRTAP5-7Q6L8G8 165 aa0.96□□□□□ -2.26
SKP1-202ENST00000353411 KRTAP4-2Q9BYR5 136 aa0.92□□□□□ -2.26
SKP1-202ENST00000353411 KRTAP5-8O75690 187 aa0.91□□□□□ -2.26
SKP1-202ENST00000353411 KRTAP5-2Q701N4 177 aa0.9□□□□□ -2.26
SKP1-202ENST00000353411 KRTAP5-10Q6L8G5 202 aa0.89□□□□□ -2.27
SKP1-202ENST00000353411 KRTAP4-4Q9BYR3 166 aa0.86□□□□□ -2.27
SKP1-202ENST00000353411 KRTAP21-1Q3LI58 79 aa0.84□□□□□ -2.28
SKP1-202ENST00000353411 KRTAP5-1Q6L8H4 278 aa0.82□□□□□ -2.28
SKP1-202ENST00000353411 KRTAP5-11Q6L8G4 156 aa0.8□□□□□ -2.28
SKP1-202ENST00000353411 PHGR1C9JFL3 82 aa0.77□□□□□ -2.29
SKP1-202ENST00000353411 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.76□□□□□ -2.29
SKP1-202ENST00000353411 KRTAP21-2Q3LI59 83 aa0.73□□□□□ -2.29
SKP1-202ENST00000353411 MUC16Q8WXI7 14507 aa0.52□□□□□ -2.33
Retrieved 77 of 20,778 RNA–protein pairs in 8.9 ms