RNA–Protein interactions for RNA: ENST00000347691.9

TRAPPC6B-202, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC6B, Length 3,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-202ENST00000347691 KRTAP19-5Q3LI72 72 aa3.73□□□□□ -1.81
TRAPPC6B-202ENST00000347691 KRTAP4-12Q9BQ66 201 aa3.73□□□□□ -1.81
TRAPPC6B-202ENST00000347691 KRTAP19-4Q3LI73 84 aa3.7□□□□□ -1.82
TRAPPC6B-202ENST00000347691 CRCT1Q9UGL9 99 aa3.65□□□□□ -1.83
TRAPPC6B-202ENST00000347691 USH2AO75445 5202 aa3.61□□□□□ -1.83
TRAPPC6B-202ENST00000347691 KRTAP2-3P0C7H8 128 aa3.56□□□□□ -1.84
TRAPPC6B-202ENST00000347691 KRTAP2-4Q9BYR9 128 aa3.56□□□□□ -1.84
TRAPPC6B-202ENST00000347691 KRTAP2-1Q9BYU5 128 aa3.56□□□□□ -1.84
TRAPPC6B-202ENST00000347691 SSPOA2VEC9 5147 aa3.55□□□□□ -1.84
TRAPPC6B-202ENST00000347691 KRTAP9-6A8MVA2 160 aa3.53□□□□□ -1.84
TRAPPC6B-202ENST00000347691 KRTAP19-7Q3SYF9 63 aa3.52□□□□□ -1.85
TRAPPC6B-202ENST00000347691 FCGBPQ9Y6R7 5405 aaPredicted RBP3.47□□□□□ -1.85
TRAPPC6B-202ENST00000347691 KRTAP4-11Q9BYQ6 195 aa3.47□□□□□ -1.85
TRAPPC6B-202ENST00000347691 MT1LQ93083 61 aa3.46□□□□□ -1.86
TRAPPC6B-202ENST00000347691 MT1EP04732 61 aa3.44□□□□□ -1.86
TRAPPC6B-202ENST00000347691 SYNE2Q8WXH0 6885 aaKnown RBP3.4□□□□□ -1.86
TRAPPC6B-202ENST00000347691 KRTAP9-7A8MTY7 169 aa3.4□□□□□ -1.87
TRAPPC6B-202ENST00000347691 MACF1Q9UPN3 7388 aaKnown RBP3.38□□□□□ -1.87
TRAPPC6B-202ENST00000347691 KMT2DO14686 5537 aa3.36□□□□□ -1.87
TRAPPC6B-202ENST00000347691 KRTAP19-6Q3LI70 58 aa3.27□□□□□ -1.89
TRAPPC6B-202ENST00000347691 MT1GP13640 62 aa3.23□□□□□ -1.89
TRAPPC6B-202ENST00000347691 MT1MQ8N339 61 aa3.21□□□□□ -1.9
TRAPPC6B-202ENST00000347691 KRTAP19-3Q7Z4W3 81 aa3.2□□□□□ -1.9
TRAPPC6B-202ENST00000347691 MUC12Q9UKN1 5478 aa3.18□□□□□ -1.9
TRAPPC6B-202ENST00000347691 KRTAP12-4P60329 112 aa3.16□□□□□ -1.9
TRAPPC6B-202ENST00000347691 KRTAP4-3Q9BYR4 195 aa3.15□□□□□ -1.9
TRAPPC6B-202ENST00000347691 NEBP20929 6669 aa3.12□□□□□ -1.91
TRAPPC6B-202ENST00000347691 KRTAP6-3Q3LI67 103 aa3.1□□□□□ -1.91
TRAPPC6B-202ENST00000347691 MDN1Q9NU22 5596 aa3.1□□□□□ -1.91
TRAPPC6B-202ENST00000347691 LCE5AQ5TCM9 118 aa3.06□□□□□ -1.92
TRAPPC6B-202ENST00000347691 MT1AP04731 61 aa3.05□□□□□ -1.92
TRAPPC6B-202ENST00000347691 KRTAP2-2Q9BYT5 123 aa3.02□□□□□ -1.93
TRAPPC6B-202ENST00000347691 SPRR2FQ96RM1 72 aa2.98□□□□□ -1.93
TRAPPC6B-202ENST00000347691 LCE1AQ5T7P2 110 aa2.96□□□□□ -1.94
TRAPPC6B-202ENST00000347691 KRTAP5-9P26371 169 aa2.95□□□□□ -1.94
TRAPPC6B-202ENST00000347691 LCE3DQ9BYE3 92 aa2.93□□□□□ -1.94
TRAPPC6B-202ENST00000347691 KRTAP20-1Q3LI63 56 aa2.93□□□□□ -1.94
TRAPPC6B-202ENST00000347691 LCE3EQ5T5B0 92 aa2.92□□□□□ -1.94
TRAPPC6B-202ENST00000347691 KRTAP6-1Q3LI64 71 aa2.9□□□□□ -1.94
TRAPPC6B-202ENST00000347691 LCE1EQ5T753 118 aa2.89□□□□□ -1.95
TRAPPC6B-202ENST00000347691 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.83□□□□□ -1.96
TRAPPC6B-202ENST00000347691 SPRR2EP22531 72 aa2.81□□□□□ -1.96
TRAPPC6B-202ENST00000347691 SPRR2BP35325 72 aa2.81□□□□□ -1.96
TRAPPC6B-202ENST00000347691 SPRR2AP35326 72 aa2.81□□□□□ -1.96
TRAPPC6B-202ENST00000347691 KRTAP5-5Q701N2 237 aaPredicted RBP2.81□□□□□ -1.96
TRAPPC6B-202ENST00000347691 PRM1P04553 51 aa2.8□□□□□ -1.96
TRAPPC6B-202ENST00000347691 SYNE1Q8NF91 8797 aaKnown RBP2.79□□□□□ -1.96
TRAPPC6B-202ENST00000347691 DSTQ03001 7570 aaKnown RBP2.74□□□□□ -1.97
TRAPPC6B-202ENST00000347691 SPRR2DP22532 72 aa2.71□□□□□ -1.98
TRAPPC6B-202ENST00000347691 KRTAP6-2Q3LI66 62 aa2.68□□□□□ -1.98
TRAPPC6B-202ENST00000347691 LCE1FQ5T754 118 aa2.67□□□□□ -1.98
TRAPPC6B-202ENST00000347691 LCE4AQ5TA78 99 aa2.66□□□□□ -1.98
TRAPPC6B-202ENST00000347691 HMCN1Q96RW7 5635 aa2.66□□□□□ -1.98
TRAPPC6B-202ENST00000347691 MT3P25713 68 aa2.65□□□□□ -1.98
TRAPPC6B-202ENST00000347691 GPR98Q8WXG9 6306 aa2.63□□□□□ -1.99
TRAPPC6B-202ENST00000347691 MUC5BQ9HC84 5762 aaPredicted RBP2.6□□□□□ -1.99
TRAPPC6B-202ENST00000347691 OBSCNQ5VST9 7968 aa2.48□□□□□ -2.01
TRAPPC6B-202ENST00000347691 KRTAP5-4Q6L8H1 288 aa2.44□□□□□ -2.02
TRAPPC6B-202ENST00000347691 MT4P47944 62 aa2.43□□□□□ -2.02
TRAPPC6B-202ENST00000347691 AHNAK2Q8IVF2 5795 aa2.41□□□□□ -2.02
TRAPPC6B-202ENST00000347691 KRTAP5-1Q6L8H4 278 aa2.36□□□□□ -2.03
TRAPPC6B-202ENST00000347691 KRTAP4-4Q9BYR3 166 aa2.35□□□□□ -2.03
TRAPPC6B-202ENST00000347691 KRTAP5-10Q6L8G5 202 aa2.34□□□□□ -2.03
TRAPPC6B-202ENST00000347691 KRTAP5-11Q6L8G4 156 aa2.32□□□□□ -2.04
TRAPPC6B-202ENST00000347691 KRTAP5-2Q701N4 177 aa2.29□□□□□ -2.04
TRAPPC6B-202ENST00000347691 KRTAP20-2Q3LI61 65 aa2.25□□□□□ -2.05
TRAPPC6B-202ENST00000347691 KRTAP5-7Q6L8G8 165 aa2.23□□□□□ -2.05
TRAPPC6B-202ENST00000347691 MUC19Q7Z5P9 8384 aa2.16□□□□□ -2.06
TRAPPC6B-202ENST00000347691 AHNAKQ09666 5890 aaKnown RBP2.14□□□□□ -2.07
TRAPPC6B-202ENST00000347691 MUC5ACP98088 5654 aa2.14□□□□□ -2.07
TRAPPC6B-202ENST00000347691 LCE1BQ5T7P3 118 aa2.05□□□□□ -2.08
TRAPPC6B-202ENST00000347691 KRTAP5-8O75690 187 aa2.01□□□□□ -2.09
TRAPPC6B-202ENST00000347691 LCE1CQ5T751 118 aa2.01□□□□□ -2.09
TRAPPC6B-202ENST00000347691 KRTAP21-2Q3LI59 83 aa1.87□□□□□ -2.11
TRAPPC6B-202ENST00000347691 KRTAP21-1Q3LI58 79 aa1.8□□□□□ -2.12
TRAPPC6B-202ENST00000347691 PHGR1C9JFL3 82 aa1.46□□□□□ -2.18
TRAPPC6B-202ENST00000347691 MUC16Q8WXI7 14507 aa1.02□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 56.1 ms