RNA–Protein interactions for RNA: ENST00000347458.9

STAU1-202, Transcript of staufen double-stranded RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene STAU1, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAU1-202ENST00000347458 KRTAP4-8Q9BYQ9 185 aa3.82□□□□□ -1.8
STAU1-202ENST00000347458 SSPOA2VEC9 5147 aa3.78□□□□□ -1.8
STAU1-202ENST00000347458 KRTAP9-7A8MTY7 169 aa3.75□□□□□ -1.81
STAU1-202ENST00000347458 LCE3BQ5TA77 95 aa3.74□□□□□ -1.81
STAU1-202ENST00000347458 KRTAP4-12Q9BQ66 201 aa3.73□□□□□ -1.81
STAU1-202ENST00000347458 KRTAP19-7Q3SYF9 63 aa3.68□□□□□ -1.82
STAU1-202ENST00000347458 KRTAP9-9Q9BYP9 154 aa3.66□□□□□ -1.82
STAU1-202ENST00000347458 KRTAP9-4Q9BYQ2 154 aa3.66□□□□□ -1.82
STAU1-202ENST00000347458 MUC12Q9UKN1 5478 aa3.66□□□□□ -1.82
STAU1-202ENST00000347458 DSTQ03001 7570 aaKnown RBP3.65□□□□□ -1.83
STAU1-202ENST00000347458 FCGBPQ9Y6R7 5405 aaPredicted RBP3.64□□□□□ -1.83
STAU1-202ENST00000347458 KRTAP12-4P60329 112 aa3.64□□□□□ -1.83
STAU1-202ENST00000347458 MT1LQ93083 61 aa3.59□□□□□ -1.83
STAU1-202ENST00000347458 CRCT1Q9UGL9 99 aa3.55□□□□□ -1.84
STAU1-202ENST00000347458 MT1EP04732 61 aa3.52□□□□□ -1.85
STAU1-202ENST00000347458 KRTAP19-4Q3LI73 84 aa3.51□□□□□ -1.85
STAU1-202ENST00000347458 KRTAP4-3Q9BYR4 195 aa3.47□□□□□ -1.85
STAU1-202ENST00000347458 SYNE2Q8WXH0 6885 aaKnown RBP3.46□□□□□ -1.85
STAU1-202ENST00000347458 MT1GP13640 62 aa3.45□□□□□ -1.86
STAU1-202ENST00000347458 MACF1Q9UPN3 7388 aaKnown RBP3.43□□□□□ -1.86
STAU1-202ENST00000347458 SYNE1Q8NF91 8797 aaKnown RBP3.38□□□□□ -1.87
STAU1-202ENST00000347458 MDN1Q9NU22 5596 aa3.38□□□□□ -1.87
STAU1-202ENST00000347458 LCE1DQ5T752 114 aa3.37□□□□□ -1.87
STAU1-202ENST00000347458 OBSCNQ5VST9 7968 aa3.37□□□□□ -1.87
STAU1-202ENST00000347458 KRTAP19-6Q3LI70 58 aa3.36□□□□□ -1.87
STAU1-202ENST00000347458 KRTAP4-9Q9BYQ8 210 aa3.36□□□□□ -1.87
STAU1-202ENST00000347458 LCE5AQ5TCM9 118 aa3.31□□□□□ -1.88
STAU1-202ENST00000347458 SPRR2FQ96RM1 72 aa3.28□□□□□ -1.88
STAU1-202ENST00000347458 PRM1P04553 51 aa3.28□□□□□ -1.88
STAU1-202ENST00000347458 KRTAP6-3Q3LI67 103 aa3.27□□□□□ -1.89
STAU1-202ENST00000347458 KRTAP2-2Q9BYT5 123 aa3.27□□□□□ -1.89
STAU1-202ENST00000347458 MT1MQ8N339 61 aa3.26□□□□□ -1.89
STAU1-202ENST00000347458 KRTAP5-5Q701N2 237 aaPredicted RBP3.25□□□□□ -1.89
STAU1-202ENST00000347458 KRTAP4-11Q9BYQ6 195 aa3.2□□□□□ -1.9
STAU1-202ENST00000347458 MT1AP04731 61 aa3.2□□□□□ -1.9
STAU1-202ENST00000347458 KRTAP4-2Q9BYR5 136 aa3.19□□□□□ -1.9
STAU1-202ENST00000347458 KRTAP19-3Q7Z4W3 81 aa3.18□□□□□ -1.9
STAU1-202ENST00000347458 LCE3DQ9BYE3 92 aa3.18□□□□□ -1.9
STAU1-202ENST00000347458 LCE3EQ5T5B0 92 aa3.17□□□□□ -1.9
STAU1-202ENST00000347458 KRTAP5-9P26371 169 aa3.11□□□□□ -1.91
STAU1-202ENST00000347458 LCE1AQ5T7P2 110 aa3.1□□□□□ -1.91
STAU1-202ENST00000347458 KRTAP6-1Q3LI64 71 aa3.09□□□□□ -1.91
STAU1-202ENST00000347458 KRTAP6-2Q3LI66 62 aa3.04□□□□□ -1.92
STAU1-202ENST00000347458 SPRR2EP22531 72 aa2.98□□□□□ -1.93
STAU1-202ENST00000347458 SPRR2BP35325 72 aa2.98□□□□□ -1.93
STAU1-202ENST00000347458 SPRR2AP35326 72 aa2.98□□□□□ -1.93
STAU1-202ENST00000347458 KRTAP20-1Q3LI63 56 aa2.94□□□□□ -1.94
STAU1-202ENST00000347458 NEBP20929 6669 aa2.89□□□□□ -1.95
STAU1-202ENST00000347458 LCE1EQ5T753 118 aa2.88□□□□□ -1.95
STAU1-202ENST00000347458 SPRR2DP22532 72 aa2.83□□□□□ -1.96
STAU1-202ENST00000347458 MT3P25713 68 aa2.8□□□□□ -1.96
STAU1-202ENST00000347458 KRTAP5-3Q6L8H2 238 aa2.66□□□□□ -1.98
STAU1-202ENST00000347458 MT4P47944 62 aa2.66□□□□□ -1.98
STAU1-202ENST00000347458 LCE1FQ5T754 118 aa2.64□□□□□ -1.99
STAU1-202ENST00000347458 GPR98Q8WXG9 6306 aa2.62□□□□□ -1.99
STAU1-202ENST00000347458 KRTAP5-4Q6L8H1 288 aa2.53□□□□□ -2.01
STAU1-202ENST00000347458 HMCN1Q96RW7 5635 aa2.52□□□□□ -2.01
STAU1-202ENST00000347458 MUC19Q7Z5P9 8384 aa2.51□□□□□ -2.01
STAU1-202ENST00000347458 KRTAP5-7Q6L8G8 165 aa2.39□□□□□ -2.03
STAU1-202ENST00000347458 KRTAP20-2Q3LI61 65 aa2.38□□□□□ -2.03
STAU1-202ENST00000347458 MUC5ACP98088 5654 aa2.35□□□□□ -2.03
STAU1-202ENST00000347458 KRTAP5-10Q6L8G5 202 aa2.35□□□□□ -2.03
STAU1-202ENST00000347458 LCE1BQ5T7P3 118 aa2.28□□□□□ -2.04
STAU1-202ENST00000347458 KRTAP5-11Q6L8G4 156 aa2.27□□□□□ -2.05
STAU1-202ENST00000347458 AHNAK2Q8IVF2 5795 aa2.23□□□□□ -2.05
STAU1-202ENST00000347458 KRTAP5-2Q701N4 177 aa2.22□□□□□ -2.05
STAU1-202ENST00000347458 KRTAP5-1Q6L8H4 278 aa2.16□□□□□ -2.06
STAU1-202ENST00000347458 KRTAP21-1Q3LI58 79 aa2.08□□□□□ -2.08
STAU1-202ENST00000347458 AHNAKQ09666 5890 aaKnown RBP2.08□□□□□ -2.08
STAU1-202ENST00000347458 MUC5BQ9HC84 5762 aaPredicted RBP2.06□□□□□ -2.08
STAU1-202ENST00000347458 KRTAP5-8O75690 187 aa2.05□□□□□ -2.08
STAU1-202ENST00000347458 KRTAP4-4Q9BYR3 166 aa1.97□□□□□ -2.09
STAU1-202ENST00000347458 KRTAP21-2Q3LI59 83 aa1.96□□□□□ -2.1
STAU1-202ENST00000347458 LCE1CQ5T751 118 aa1.96□□□□□ -2.1
STAU1-202ENST00000347458 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.89□□□□□ -2.11
STAU1-202ENST00000347458 PHGR1C9JFL3 82 aa1.42□□□□□ -2.18
STAU1-202ENST00000347458 MUC16Q8WXI7 14507 aa1.04□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 39.1 ms