RNA–Protein interactions for RNA: ENST00000341514.10

ATP7A-201, Transcript of ATPase copper transporting alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATP7A, Length 8,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7A-201ENST00000341514 KRTAP2-4Q9BYR9 128 aa1.46□□□□□ -2.18
ATP7A-201ENST00000341514 KRTAP2-1Q9BYU5 128 aa1.46□□□□□ -2.18
ATP7A-201ENST00000341514 MT1FP04733 61 aa1.44□□□□□ -2.18
ATP7A-201ENST00000341514 LCE3EQ5T5B0 92 aa1.43□□□□□ -2.18
ATP7A-201ENST00000341514 LRP2P98164 4655 aa1.43□□□□□ -2.18
ATP7A-201ENST00000341514 KRTAP19-2Q3LHN2 52 aa1.42□□□□□ -2.18
ATP7A-201ENST00000341514 MUC2Q02817 5179 aa1.42□□□□□ -2.18
ATP7A-201ENST00000341514 KRTAP4-2Q9BYR5 136 aa1.41□□□□□ -2.18
ATP7A-201ENST00000341514 OBSCNQ5VST9 7968 aa1.41□□□□□ -2.18
ATP7A-201ENST00000341514 FAT4Q6V0I7 4981 aa1.41□□□□□ -2.18
ATP7A-201ENST00000341514 KRTAP12-4P60329 112 aa1.4□□□□□ -2.19
ATP7A-201ENST00000341514 LCE3DQ9BYE3 92 aa1.38□□□□□ -2.19
ATP7A-201ENST00000341514 KRTAP19-5Q3LI72 72 aa1.37□□□□□ -2.19
ATP7A-201ENST00000341514 MT1AP04731 61 aa1.37□□□□□ -2.19
ATP7A-201ENST00000341514 MT1XP80297 61 aa1.37□□□□□ -2.19
ATP7A-201ENST00000341514 LPAP08519 4548 aa1.36□□□□□ -2.19
ATP7A-201ENST00000341514 KRTAP5-3Q6L8H2 238 aa1.36□□□□□ -2.19
ATP7A-201ENST00000341514 USH2AO75445 5202 aa1.35□□□□□ -2.19
ATP7A-201ENST00000341514 MT1BP07438 61 aa1.35□□□□□ -2.19
ATP7A-201ENST00000341514 GPR98Q8WXG9 6306 aa1.34□□□□□ -2.2
ATP7A-201ENST00000341514 MT1LQ93083 61 aa1.34□□□□□ -2.2
ATP7A-201ENST00000341514 MT1EP04732 61 aa1.33□□□□□ -2.2
ATP7A-201ENST00000341514 SPRR2BP35325 72 aa1.32□□□□□ -2.2
ATP7A-201ENST00000341514 SPRR2AP35326 72 aa1.32□□□□□ -2.2
ATP7A-201ENST00000341514 SSPOA2VEC9 5147 aa1.3□□□□□ -2.2
ATP7A-201ENST00000341514 LCE1FQ5T754 118 aa1.29□□□□□ -2.2
ATP7A-201ENST00000341514 MT1GP13640 62 aa1.29□□□□□ -2.2
ATP7A-201ENST00000341514 CRCT1Q9UGL9 99 aa1.28□□□□□ -2.2
ATP7A-201ENST00000341514 SPRR2FQ96RM1 72 aa1.27□□□□□ -2.21
ATP7A-201ENST00000341514 MUC5BQ9HC84 5762 aaPredicted RBP1.27□□□□□ -2.21
ATP7A-201ENST00000341514 KRTAP19-6Q3LI70 58 aa1.27□□□□□ -2.21
ATP7A-201ENST00000341514 KMT2DO14686 5537 aa1.24□□□□□ -2.21
ATP7A-201ENST00000341514 KRTAP19-3Q7Z4W3 81 aa1.24□□□□□ -2.21
ATP7A-201ENST00000341514 SPRR2EP22531 72 aa1.22□□□□□ -2.21
ATP7A-201ENST00000341514 SPRR2DP22532 72 aa1.21□□□□□ -2.22
ATP7A-201ENST00000341514 PRM1P04553 51 aa1.19□□□□□ -2.22
ATP7A-201ENST00000341514 FCGBPQ9Y6R7 5405 aaPredicted RBP1.19□□□□□ -2.22
ATP7A-201ENST00000341514 MT1MQ8N339 61 aa1.19□□□□□ -2.22
ATP7A-201ENST00000341514 KRTAP9-6A8MVA2 160 aa1.19□□□□□ -2.22
ATP7A-201ENST00000341514 HMCN1Q96RW7 5635 aa1.17□□□□□ -2.22
ATP7A-201ENST00000341514 NEBP20929 6669 aa1.15□□□□□ -2.23
ATP7A-201ENST00000341514 KRTAP6-3Q3LI67 103 aa1.14□□□□□ -2.23
ATP7A-201ENST00000341514 KRTAP19-7Q3SYF9 63 aa1.14□□□□□ -2.23
ATP7A-201ENST00000341514 MUC19Q7Z5P9 8384 aa1.14□□□□□ -2.23
ATP7A-201ENST00000341514 SYNE2Q8WXH0 6885 aaKnown RBP1.13□□□□□ -2.23
ATP7A-201ENST00000341514 MDN1Q9NU22 5596 aa1.12□□□□□ -2.23
ATP7A-201ENST00000341514 FSIP2Q5CZC0 6907 aa1.1□□□□□ -2.23
ATP7A-201ENST00000341514 SYNE1Q8NF91 8797 aaKnown RBP1.08□□□□□ -2.24
ATP7A-201ENST00000341514 KRTAP5-2Q701N4 177 aa1.08□□□□□ -2.24
ATP7A-201ENST00000341514 AHNAKQ09666 5890 aaKnown RBP1.05□□□□□ -2.24
ATP7A-201ENST00000341514 KRTAP6-2Q3LI66 62 aa1.04□□□□□ -2.24
ATP7A-201ENST00000341514 MUC12Q9UKN1 5478 aa1.04□□□□□ -2.24
ATP7A-201ENST00000341514 LCE1CQ5T751 118 aa1.04□□□□□ -2.24
ATP7A-201ENST00000341514 LCE1BQ5T7P3 118 aa1.04□□□□□ -2.24
ATP7A-201ENST00000341514 KRTAP5-9P26371 169 aa1.02□□□□□ -2.25
ATP7A-201ENST00000341514 MACF1Q9UPN3 7388 aaKnown RBP1.01□□□□□ -2.25
ATP7A-201ENST00000341514 KRTAP20-1Q3LI63 56 aa1□□□□□ -2.25
ATP7A-201ENST00000341514 KRTAP6-1Q3LI64 71 aa0.99□□□□□ -2.25
ATP7A-201ENST00000341514 DSTQ03001 7570 aaKnown RBP0.99□□□□□ -2.25
ATP7A-201ENST00000341514 KRTAP4-3Q9BYR4 195 aa0.98□□□□□ -2.25
ATP7A-201ENST00000341514 KRTAP5-5Q701N2 237 aaPredicted RBP0.97□□□□□ -2.25
ATP7A-201ENST00000341514 KRTAP5-4Q6L8H1 288 aa0.96□□□□□ -2.26
ATP7A-201ENST00000341514 MT4P47944 62 aa0.95□□□□□ -2.26
ATP7A-201ENST00000341514 AHNAK2Q8IVF2 5795 aa0.93□□□□□ -2.26
ATP7A-201ENST00000341514 MUC5ACP98088 5654 aa0.92□□□□□ -2.26
ATP7A-201ENST00000341514 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.9□□□□□ -2.27
ATP7A-201ENST00000341514 KRTAP5-11Q6L8G4 156 aa0.88□□□□□ -2.27
ATP7A-201ENST00000341514 KRTAP20-2Q3LI61 65 aa0.86□□□□□ -2.27
ATP7A-201ENST00000341514 KRTAP5-1Q6L8H4 278 aa0.83□□□□□ -2.28
ATP7A-201ENST00000341514 KRTAP21-1Q3LI58 79 aa0.79□□□□□ -2.28
ATP7A-201ENST00000341514 KRTAP5-10Q6L8G5 202 aa0.76□□□□□ -2.29
ATP7A-201ENST00000341514 KRTAP5-8O75690 187 aa0.68□□□□□ -2.3
ATP7A-201ENST00000341514 KRTAP5-7Q6L8G8 165 aa0.65□□□□□ -2.3
ATP7A-201ENST00000341514 KRTAP4-4Q9BYR3 166 aa0.64□□□□□ -2.31
ATP7A-201ENST00000341514 KRTAP21-2Q3LI59 83 aa0.58□□□□□ -2.32
ATP7A-201ENST00000341514 PHGR1C9JFL3 82 aa0.52□□□□□ -2.33
ATP7A-201ENST00000341514 MUC16Q8WXI7 14507 aa0.5□□□□□ -2.33
Retrieved 77 of 20,778 RNA–protein pairs in 68.8 ms