RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 LCE1AQ5T7P2 110 aa3.14□□□□□ -1.91
PTCHD4-201ENST00000339488 SYNE1Q8NF91 8797 aaKnown RBP3.13□□□□□ -1.91
PTCHD4-201ENST00000339488 KRTAP6-3Q3LI67 103 aa3.12□□□□□ -1.91
PTCHD4-201ENST00000339488 CRCT1Q9UGL9 99 aa3.11□□□□□ -1.91
PTCHD4-201ENST00000339488 KRTAP4-9Q9BYQ8 210 aa3.1□□□□□ -1.91
PTCHD4-201ENST00000339488 KRTAP9-7A8MTY7 169 aa3.09□□□□□ -1.91
PTCHD4-201ENST00000339488 KRTAP2-2Q9BYT5 123 aa3.06□□□□□ -1.92
PTCHD4-201ENST00000339488 PRM1P04553 51 aa3.06□□□□□ -1.92
PTCHD4-201ENST00000339488 KRTAP19-6Q3LI70 58 aa3.06□□□□□ -1.92
PTCHD4-201ENST00000339488 OBSCNQ5VST9 7968 aa3.06□□□□□ -1.92
PTCHD4-201ENST00000339488 KRTAP9-6A0A140TA67 174 aa3.05□□□□□ -1.92
PTCHD4-201ENST00000339488 LCE1EQ5T753 118 aa3.05□□□□□ -1.92
PTCHD4-201ENST00000339488 KRTAP19-7Q3SYF9 63 aa3.04□□□□□ -1.92
PTCHD4-201ENST00000339488 KRTAP4-3Q9BYR4 195 aa3.04□□□□□ -1.92
PTCHD4-201ENST00000339488 DSTQ03001 7570 aaKnown RBP3.01□□□□□ -1.93
PTCHD4-201ENST00000339488 MACF1Q9UPN3 7388 aaKnown RBP3□□□□□ -1.93
PTCHD4-201ENST00000339488 MT1GP13640 62 aa2.99□□□□□ -1.93
PTCHD4-201ENST00000339488 MT1LQ93083 61 aa2.98□□□□□ -1.93
PTCHD4-201ENST00000339488 LCE3BQ5TA77 95 aa2.96□□□□□ -1.94
PTCHD4-201ENST00000339488 SYNE2Q8WXH0 6885 aaKnown RBP2.96□□□□□ -1.94
PTCHD4-201ENST00000339488 KRTAP5-5Q701N2 237 aaPredicted RBP2.91□□□□□ -1.94
PTCHD4-201ENST00000339488 MUC12Q9UKN1 5478 aa2.89□□□□□ -1.95
PTCHD4-201ENST00000339488 LCE1DQ5T752 114 aa2.89□□□□□ -1.95
PTCHD4-201ENST00000339488 MT1EP04732 61 aa2.88□□□□□ -1.95
PTCHD4-201ENST00000339488 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.87□□□□□ -1.95
PTCHD4-201ENST00000339488 MDN1Q9NU22 5596 aa2.85□□□□□ -1.95
PTCHD4-201ENST00000339488 LCE3DQ9BYE3 92 aa2.79□□□□□ -1.96
PTCHD4-201ENST00000339488 LCE3EQ5T5B0 92 aa2.78□□□□□ -1.96
PTCHD4-201ENST00000339488 KRTAP4-6Q9BYQ5 205 aa2.76□□□□□ -1.97
PTCHD4-201ENST00000339488 SPRR2FQ96RM1 72 aa2.75□□□□□ -1.97
PTCHD4-201ENST00000339488 KRTAP6-2Q3LI66 62 aa2.75□□□□□ -1.97
PTCHD4-201ENST00000339488 KRTAP19-4Q3LI73 84 aa2.72□□□□□ -1.97
PTCHD4-201ENST00000339488 KRTAP5-9P26371 169 aa2.72□□□□□ -1.97
PTCHD4-201ENST00000339488 MT1MQ8N339 61 aa2.67□□□□□ -1.98
PTCHD4-201ENST00000339488 MT1AP04731 61 aa2.64□□□□□ -1.99
PTCHD4-201ENST00000339488 NEBP20929 6669 aa2.63□□□□□ -1.99
PTCHD4-201ENST00000339488 KRTAP6-1Q3LI64 71 aa2.63□□□□□ -1.99
PTCHD4-201ENST00000339488 SPRR2EP22531 72 aa2.63□□□□□ -1.99
PTCHD4-201ENST00000339488 SPRR2BP35325 72 aa2.63□□□□□ -1.99
PTCHD4-201ENST00000339488 SPRR2AP35326 72 aa2.63□□□□□ -1.99
PTCHD4-201ENST00000339488 LCE1FQ5T754 118 aa2.61□□□□□ -1.99
PTCHD4-201ENST00000339488 KRTAP19-3Q7Z4W3 81 aa2.61□□□□□ -1.99
PTCHD4-201ENST00000339488 LCE5AQ5TCM9 118 aa2.58□□□□□ -2
PTCHD4-201ENST00000339488 MUC19Q7Z5P9 8384 aa2.53□□□□□ -2
PTCHD4-201ENST00000339488 SPRR2DP22532 72 aa2.52□□□□□ -2.01
PTCHD4-201ENST00000339488 KRTAP4-12Q9BQ66 201 aa2.46□□□□□ -2.02
PTCHD4-201ENST00000339488 KRTAP9-9Q9BYP9 154 aa2.43□□□□□ -2.02
PTCHD4-201ENST00000339488 KRTAP9-4Q9BYQ2 154 aa2.43□□□□□ -2.02
PTCHD4-201ENST00000339488 KRTAP20-1Q3LI63 56 aa2.39□□□□□ -2.03
PTCHD4-201ENST00000339488 LCE4AQ5TA78 99 aa2.39□□□□□ -2.03
PTCHD4-201ENST00000339488 KRTAP4-11Q9BYQ6 195 aa2.33□□□□□ -2.04
PTCHD4-201ENST00000339488 HMCN1Q96RW7 5635 aa2.28□□□□□ -2.05
PTCHD4-201ENST00000339488 MT4P47944 62 aa2.24□□□□□ -2.05
PTCHD4-201ENST00000339488 KRTAP5-4Q6L8H1 288 aa2.24□□□□□ -2.05
PTCHD4-201ENST00000339488 KRTAP4-2Q9BYR5 136 aa2.18□□□□□ -2.06
PTCHD4-201ENST00000339488 KRTAP20-2Q3LI61 65 aa2.12□□□□□ -2.07
PTCHD4-201ENST00000339488 MT3P25713 68 aa2.12□□□□□ -2.07
PTCHD4-201ENST00000339488 MUC5ACP98088 5654 aa2.11□□□□□ -2.07
PTCHD4-201ENST00000339488 KRTAP5-3Q6L8H2 238 aa2.05□□□□□ -2.08
PTCHD4-201ENST00000339488 AHNAK2Q8IVF2 5795 aa2.03□□□□□ -2.08
PTCHD4-201ENST00000339488 LCE1CQ5T751 118 aa2.02□□□□□ -2.09
PTCHD4-201ENST00000339488 LCE1BQ5T7P3 118 aa2.02□□□□□ -2.09
PTCHD4-201ENST00000339488 KRTAP5-2Q701N4 177 aa2.01□□□□□ -2.09
PTCHD4-201ENST00000339488 KRTAP5-10Q6L8G5 202 aa1.96□□□□□ -2.1
PTCHD4-201ENST00000339488 GPR98Q8WXG9 6306 aa1.92□□□□□ -2.1
PTCHD4-201ENST00000339488 KRTAP21-1Q3LI58 79 aa1.85□□□□□ -2.11
PTCHD4-201ENST00000339488 KRTAP5-8O75690 187 aa1.81□□□□□ -2.12
PTCHD4-201ENST00000339488 KRTAP5-1Q6L8H4 278 aa1.78□□□□□ -2.12
PTCHD4-201ENST00000339488 KRTAP4-4Q9BYR3 166 aa1.75□□□□□ -2.13
PTCHD4-201ENST00000339488 KRTAP5-7Q6L8G8 165 aa1.73□□□□□ -2.13
PTCHD4-201ENST00000339488 MUC5BQ9HC84 5762 aaPredicted RBP1.7□□□□□ -2.14
PTCHD4-201ENST00000339488 KRTAP21-2Q3LI59 83 aa1.6□□□□□ -2.15
PTCHD4-201ENST00000339488 AHNAKQ09666 5890 aaKnown RBP1.54□□□□□ -2.16
PTCHD4-201ENST00000339488 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.54□□□□□ -2.16
PTCHD4-201ENST00000339488 KRTAP5-11Q6L8G4 156 aa1.47□□□□□ -2.17
PTCHD4-201ENST00000339488 PHGR1C9JFL3 82 aa1.26□□□□□ -2.21
PTCHD4-201ENST00000339488 MUC16Q8WXI7 14507 aa0.99□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 57 ms