RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 MT1AP04731 61 aa2.56□□□□□ -2
TDP1-201ENST00000335725 MT1EP04732 61 aa2.56□□□□□ -2
TDP1-201ENST00000335725 MT1LQ93083 61 aa2.55□□□□□ -2
TDP1-201ENST00000335725 RNF213Q63HN8 5207 aa2.54□□□□□ -2
TDP1-201ENST00000335725 UBR4Q5T4S7 5183 aa2.53□□□□□ -2
TDP1-201ENST00000335725 LCE3DQ9BYE3 92 aa2.53□□□□□ -2
TDP1-201ENST00000335725 KRTAP19-7Q3SYF9 63 aa2.53□□□□□ -2.01
TDP1-201ENST00000335725 KRTAP5-5Q701N2 237 aaPredicted RBP2.53□□□□□ -2.01
TDP1-201ENST00000335725 KRTAP9-8Q9BYQ0 159 aa2.52□□□□□ -2.01
TDP1-201ENST00000335725 SYNE1Q8NF91 8797 aaKnown RBP2.49□□□□□ -2.01
TDP1-201ENST00000335725 KRTAP4-8A0A0G2JLE6 195 aa2.45□□□□□ -2.02
TDP1-201ENST00000335725 KRTAP4-8Q9BYQ9 185 aa2.45□□□□□ -2.02
TDP1-201ENST00000335725 LOC100996750A0A140TA64 210 aa2.42□□□□□ -2.02
TDP1-201ENST00000335725 MT3P25713 68 aa2.42□□□□□ -2.02
TDP1-201ENST00000335725 MT1GP13640 62 aa2.41□□□□□ -2.02
TDP1-201ENST00000335725 LCE3BQ5TA77 95 aa2.41□□□□□ -2.02
TDP1-201ENST00000335725 KRTAP9-4Q9BYQ2 154 aa2.41□□□□□ -2.02
TDP1-201ENST00000335725 KRTAP9-3Q9BYQ3 159 aa2.41□□□□□ -2.02
TDP1-201ENST00000335725 KRTAP4-9Q9BYQ8 210 aa2.39□□□□□ -2.03
TDP1-201ENST00000335725 KRTAP6-2Q3LI66 62 aa2.39□□□□□ -2.03
TDP1-201ENST00000335725 LCE4AQ5TA78 99 aa2.37□□□□□ -2.03
TDP1-201ENST00000335725 CRCT1Q9UGL9 99 aa2.37□□□□□ -2.03
TDP1-201ENST00000335725 SPRR2FQ96RM1 72 aa2.32□□□□□ -2.04
TDP1-201ENST00000335725 KRTAP19-6Q3LI70 58 aa2.29□□□□□ -2.04
TDP1-201ENST00000335725 KRTAP9-9Q9BYP9 154 aa2.28□□□□□ -2.04
TDP1-201ENST00000335725 KRTAP4-3Q9BYR4 195 aa2.27□□□□□ -2.05
TDP1-201ENST00000335725 MT1MQ8N339 61 aa2.24□□□□□ -2.05
TDP1-201ENST00000335725 SSPOA2VEC9 5147 aa2.24□□□□□ -2.05
TDP1-201ENST00000335725 KMT2DO14686 5537 aa2.23□□□□□ -2.05
TDP1-201ENST00000335725 SPRR2AP35326 72 aa2.22□□□□□ -2.05
TDP1-201ENST00000335725 KRTAP19-3Q7Z4W3 81 aa2.17□□□□□ -2.06
TDP1-201ENST00000335725 OBSCNQ5VST9 7968 aa2.17□□□□□ -2.06
TDP1-201ENST00000335725 SPRR2BP35325 72 aa2.16□□□□□ -2.06
TDP1-201ENST00000335725 SPRR2DP22532 72 aa2.16□□□□□ -2.06
TDP1-201ENST00000335725 USH2AO75445 5202 aa2.15□□□□□ -2.07
TDP1-201ENST00000335725 SPRR2EP22531 72 aa2.14□□□□□ -2.07
TDP1-201ENST00000335725 KRTAP6-1Q3LI64 71 aa2.14□□□□□ -2.07
TDP1-201ENST00000335725 KRTAP4-6Q9BYQ5 205 aa2.12□□□□□ -2.07
TDP1-201ENST00000335725 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.08□□□□□ -2.08
TDP1-201ENST00000335725 KRTAP5-9P26371 169 aa2.02□□□□□ -2.09
TDP1-201ENST00000335725 FCGBPQ9Y6R7 5405 aaPredicted RBP2□□□□□ -2.09
TDP1-201ENST00000335725 KRTAP4-12Q9BQ66 201 aa1.97□□□□□ -2.09
TDP1-201ENST00000335725 KRTAP5-3Q6L8H2 238 aa1.95□□□□□ -2.1
TDP1-201ENST00000335725 NEBP20929 6669 aa1.94□□□□□ -2.1
TDP1-201ENST00000335725 KRTAP4-11Q9BYQ6 195 aa1.94□□□□□ -2.1
TDP1-201ENST00000335725 FSIP2Q5CZC0 6907 aa1.91□□□□□ -2.1
TDP1-201ENST00000335725 MACF1Q9UPN3 7388 aaKnown RBP1.88□□□□□ -2.11
TDP1-201ENST00000335725 HMCN1Q96RW7 5635 aa1.85□□□□□ -2.11
TDP1-201ENST00000335725 GPR98Q8WXG9 6306 aa1.85□□□□□ -2.11
TDP1-201ENST00000335725 KRTAP20-1Q3LI63 56 aa1.82□□□□□ -2.12
TDP1-201ENST00000335725 LCE1CQ5T751 118 aa1.82□□□□□ -2.12
TDP1-201ENST00000335725 LCE1BQ5T7P3 118 aa1.82□□□□□ -2.12
TDP1-201ENST00000335725 KRTAP21-1Q3LI58 79 aa1.78□□□□□ -2.12
TDP1-201ENST00000335725 DSTQ03001 7570 aaKnown RBP1.78□□□□□ -2.12
TDP1-201ENST00000335725 SYNE2Q8WXH0 6885 aaKnown RBP1.77□□□□□ -2.13
TDP1-201ENST00000335725 MUC19Q7Z5P9 8384 aa1.77□□□□□ -2.13
TDP1-201ENST00000335725 MUC12Q9UKN1 5478 aa1.76□□□□□ -2.13
TDP1-201ENST00000335725 KRTAP5-10Q6L8G5 202 aa1.71□□□□□ -2.13
TDP1-201ENST00000335725 MDN1Q9NU22 5596 aa1.69□□□□□ -2.14
TDP1-201ENST00000335725 KRTAP5-4Q6L8H1 288 aa1.66□□□□□ -2.14
TDP1-201ENST00000335725 KRTAP5-7Q6L8G8 165 aa1.62□□□□□ -2.15
TDP1-201ENST00000335725 KRTAP5-2Q701N4 177 aa1.62□□□□□ -2.15
TDP1-201ENST00000335725 KRTAP5-1Q6L8H4 278 aa1.58□□□□□ -2.16
TDP1-201ENST00000335725 MUC5ACP98088 5654 aa1.58□□□□□ -2.16
TDP1-201ENST00000335725 MT4P47944 62 aa1.57□□□□□ -2.16
TDP1-201ENST00000335725 KRTAP4-2Q9BYR5 136 aa1.55□□□□□ -2.16
TDP1-201ENST00000335725 KRTAP20-2Q3LI61 65 aa1.55□□□□□ -2.16
TDP1-201ENST00000335725 AHNAK2Q8IVF2 5795 aa1.51□□□□□ -2.17
TDP1-201ENST00000335725 MUC5BQ9HC84 5762 aaPredicted RBP1.48□□□□□ -2.17
TDP1-201ENST00000335725 AHNAKQ09666 5890 aaKnown RBP1.39□□□□□ -2.19
TDP1-201ENST00000335725 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.35□□□□□ -2.19
TDP1-201ENST00000335725 KRTAP21-2Q3LI59 83 aa1.34□□□□□ -2.2
TDP1-201ENST00000335725 KRTAP5-8O75690 187 aa1.33□□□□□ -2.2
TDP1-201ENST00000335725 KRTAP4-4Q9BYR3 166 aa1.21□□□□□ -2.22
TDP1-201ENST00000335725 KRTAP5-11Q6L8G4 156 aa1.2□□□□□ -2.22
TDP1-201ENST00000335725 PHGR1C9JFL3 82 aa0.94□□□□□ -2.26
TDP1-201ENST00000335725 MUC16Q8WXI7 14507 aa0.89□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 300.3 ms