RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 LPAP08519 4548 aa2.87□□□□□ -1.95
SPTBN1-201ENST00000333896 LCE4AQ5TA78 99 aa2.87□□□□□ -1.95
SPTBN1-201ENST00000333896 KRTAP6-2Q3LI66 62 aa2.85□□□□□ -1.95
SPTBN1-201ENST00000333896 RYR3Q15413 4870 aa2.85□□□□□ -1.95
SPTBN1-201ENST00000333896 KRTAP19-6Q3LI70 58 aa2.8□□□□□ -1.96
SPTBN1-201ENST00000333896 SYNE2Q8WXH0 6885 aaKnown RBP2.78□□□□□ -1.96
SPTBN1-201ENST00000333896 KRTAP9-2Q9BYQ4 174 aa2.77□□□□□ -1.97
SPTBN1-201ENST00000333896 KRTAP17-1Q9BYP8 105 aa2.77□□□□□ -1.97
SPTBN1-201ENST00000333896 KRTAP19-2Q3LHN2 52 aa2.77□□□□□ -1.97
SPTBN1-201ENST00000333896 LRP2P98164 4655 aa2.76□□□□□ -1.97
SPTBN1-201ENST00000333896 KRTAP2-2Q9BYT5 123 aa2.76□□□□□ -1.97
SPTBN1-201ENST00000333896 KRTAP19-7Q3SYF9 63 aa2.74□□□□□ -1.97
SPTBN1-201ENST00000333896 PCLOQ9Y6V0 5065 aa2.72□□□□□ -1.97
SPTBN1-201ENST00000333896 KRTAP20-1Q3LI63 56 aa2.71□□□□□ -1.97
SPTBN1-201ENST00000333896 KRTAP9-6A8MVA2 160 aa2.69□□□□□ -1.98
SPTBN1-201ENST00000333896 KRTAP9-7A8MTY7 169 aa2.69□□□□□ -1.98
SPTBN1-201ENST00000333896 RYR2Q92736 4967 aa2.63□□□□□ -1.99
SPTBN1-201ENST00000333896 KIAA1109Q2LD37 5005 aa2.61□□□□□ -1.99
SPTBN1-201ENST00000333896 KMT2CQ8NEZ4 4911 aaKnown RBP2.59□□□□□ -1.99
SPTBN1-201ENST00000333896 KRTAP9-6A0A140TA67 174 aa2.59□□□□□ -1.99
SPTBN1-201ENST00000333896 KRTAP6-1Q3LI64 71 aa2.59□□□□□ -1.99
SPTBN1-201ENST00000333896 KRTAP9-4Q9BYQ2 154 aa2.57□□□□□ -2
SPTBN1-201ENST00000333896 KRTAP6-3Q3LI67 103 aa2.54□□□□□ -2
SPTBN1-201ENST00000333896 HYDINQ4G0P3 5121 aa2.54□□□□□ -2
SPTBN1-201ENST00000333896 BIRC6Q9NR09 4857 aa2.51□□□□□ -2.01
SPTBN1-201ENST00000333896 HERC2O95714 4834 aa2.5□□□□□ -2.01
SPTBN1-201ENST00000333896 KRTAP9-9Q9BYP9 154 aa2.49□□□□□ -2.01
SPTBN1-201ENST00000333896 SYNE1Q8NF91 8797 aaKnown RBP2.49□□□□□ -2.01
SPTBN1-201ENST00000333896 LCE2AQ5TA79 106 aaPredicted RBP2.49□□□□□ -2.01
SPTBN1-201ENST00000333896 KRTAP4-11Q9BYQ6 195 aa2.48□□□□□ -2.01
SPTBN1-201ENST00000333896 HERC1Q15751 4861 aa2.45□□□□□ -2.02
SPTBN1-201ENST00000333896 KRTAP20-2Q3LI61 65 aa2.38□□□□□ -2.03
SPTBN1-201ENST00000333896 EPPK1P58107 5090 aaKnown RBP2.34□□□□□ -2.04
SPTBN1-201ENST00000333896 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.28□□□□□ -2.04
SPTBN1-201ENST00000333896 RNF213Q63HN8 5207 aa2.27□□□□□ -2.05
SPTBN1-201ENST00000333896 HMCN2Q8NDA2 5059 aa2.24□□□□□ -2.05
SPTBN1-201ENST00000333896 ABCA13Q86UQ4 5058 aa2.23□□□□□ -2.05
SPTBN1-201ENST00000333896 KRTAP4-4Q9BYR3 166 aa2.22□□□□□ -2.05
SPTBN1-201ENST00000333896 KRTAP5-5Q701N2 237 aaPredicted RBP2.19□□□□□ -2.06
SPTBN1-201ENST00000333896 UBR4Q5T4S7 5183 aa2.17□□□□□ -2.06
SPTBN1-201ENST00000333896 FSIP2Q5CZC0 6907 aa2.16□□□□□ -2.06
SPTBN1-201ENST00000333896 KRTAP5-9P26371 169 aa2.15□□□□□ -2.07
SPTBN1-201ENST00000333896 FAT4Q6V0I7 4981 aa2.14□□□□□ -2.07
SPTBN1-201ENST00000333896 MUC2Q02817 5179 aa2.12□□□□□ -2.07
SPTBN1-201ENST00000333896 KRTAP4-6Q9BYQ5 205 aa2.1□□□□□ -2.07
SPTBN1-201ENST00000333896 KRTAP4-12Q9BQ66 201 aa2.08□□□□□ -2.08
SPTBN1-201ENST00000333896 KRTAP4-2Q9BYR5 136 aa2.08□□□□□ -2.08
SPTBN1-201ENST00000333896 MDN1Q9NU22 5596 aa2.05□□□□□ -2.08
SPTBN1-201ENST00000333896 MUC12Q9UKN1 5478 aa2.03□□□□□ -2.08
SPTBN1-201ENST00000333896 OBSCNQ5VST9 7968 aa1.99□□□□□ -2.09
SPTBN1-201ENST00000333896 KRTAP5-4Q6L8H1 288 aa1.95□□□□□ -2.1
SPTBN1-201ENST00000333896 KMT2DO14686 5537 aa1.86□□□□□ -2.11
SPTBN1-201ENST00000333896 USH2AO75445 5202 aa1.86□□□□□ -2.11
SPTBN1-201ENST00000333896 NEBP20929 6669 aa1.85□□□□□ -2.11
SPTBN1-201ENST00000333896 DSTQ03001 7570 aaKnown RBP1.83□□□□□ -2.12
SPTBN1-201ENST00000333896 FCGBPQ9Y6R7 5405 aaPredicted RBP1.79□□□□□ -2.12
SPTBN1-201ENST00000333896 AHNAK2Q8IVF2 5795 aa1.76□□□□□ -2.13
SPTBN1-201ENST00000333896 GPR98Q8WXG9 6306 aa1.76□□□□□ -2.13
SPTBN1-201ENST00000333896 MUC5ACP98088 5654 aa1.76□□□□□ -2.13
SPTBN1-201ENST00000333896 SSPOA2VEC9 5147 aa1.75□□□□□ -2.13
SPTBN1-201ENST00000333896 MUC19Q7Z5P9 8384 aa1.73□□□□□ -2.13
SPTBN1-201ENST00000333896 MACF1Q9UPN3 7388 aaKnown RBP1.72□□□□□ -2.13
SPTBN1-201ENST00000333896 KRTAP5-10Q6L8G5 202 aa1.71□□□□□ -2.14
SPTBN1-201ENST00000333896 KRTAP5-3Q6L8H2 238 aa1.69□□□□□ -2.14
SPTBN1-201ENST00000333896 AHNAKQ09666 5890 aaKnown RBP1.62□□□□□ -2.15
SPTBN1-201ENST00000333896 MUC5BQ9HC84 5762 aaPredicted RBP1.6□□□□□ -2.15
SPTBN1-201ENST00000333896 KRTAP21-1Q3LI58 79 aa1.56□□□□□ -2.16
SPTBN1-201ENST00000333896 HMCN1Q96RW7 5635 aa1.56□□□□□ -2.16
SPTBN1-201ENST00000333896 PHGR1C9JFL3 82 aa1.54□□□□□ -2.16
SPTBN1-201ENST00000333896 KRTAP5-2Q701N4 177 aa1.5□□□□□ -2.17
SPTBN1-201ENST00000333896 KRTAP5-11Q6L8G4 156 aa1.41□□□□□ -2.18
SPTBN1-201ENST00000333896 KRTAP5-8O75690 187 aa1.41□□□□□ -2.18
SPTBN1-201ENST00000333896 KRTAP5-1Q6L8H4 278 aa1.36□□□□□ -2.19
SPTBN1-201ENST00000333896 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.36□□□□□ -2.19
SPTBN1-201ENST00000333896 KRTAP21-2Q3LI59 83 aa1.31□□□□□ -2.2
SPTBN1-201ENST00000333896 KRTAP5-7Q6L8G8 165 aa1.2□□□□□ -2.22
SPTBN1-201ENST00000333896 MUC16Q8WXI7 14507 aa1.11□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 104.8 ms