RNA–Protein interactions for RNA: ENST00000332687.10

RLIM-201, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RLIM, Length 8,317 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-201ENST00000332687 FLGP20930 4061 aaPredicted RBP1.63□□□□□ -2.15
RLIM-201ENST00000332687 MT1MQ8N339 61 aa1.61□□□□□ -2.15
RLIM-201ENST00000332687 PKHD1P08F94 4074 aa1.6□□□□□ -2.15
RLIM-201ENST00000332687 KRTAP2-3P0C7H8 128 aa1.6□□□□□ -2.15
RLIM-201ENST00000332687 KRTAP2-4Q9BYR9 128 aa1.6□□□□□ -2.15
RLIM-201ENST00000332687 KRTAP6-3Q3LI67 103 aa1.59□□□□□ -2.15
RLIM-201ENST00000332687 SPRR5A0A1B0GTR4 108 aa1.59□□□□□ -2.15
RLIM-201ENST00000332687 LCE4AQ5TA78 99 aa1.59□□□□□ -2.15
RLIM-201ENST00000332687 SSPOA2VEC9 5147 aa1.59□□□□□ -2.15
RLIM-201ENST00000332687 GPR98Q8WXG9 6306 aa1.59□□□□□ -2.16
RLIM-201ENST00000332687 LPAP08519 4548 aa1.56□□□□□ -2.16
RLIM-201ENST00000332687 MUC17Q685J3 4493 aa1.56□□□□□ -2.16
RLIM-201ENST00000332687 SYNE1Q8NF91 8797 aaKnown RBP1.55□□□□□ -2.16
RLIM-201ENST00000332687 KRTAP9-7A8MTY7 169 aa1.54□□□□□ -2.16
RLIM-201ENST00000332687 FSIP2Q5CZC0 6907 aa1.54□□□□□ -2.16
RLIM-201ENST00000332687 MUC2Q02817 5179 aa1.53□□□□□ -2.16
RLIM-201ENST00000332687 MT4P47944 62 aa1.53□□□□□ -2.16
RLIM-201ENST00000332687 LCE2AQ5TA79 106 aaPredicted RBP1.52□□□□□ -2.17
RLIM-201ENST00000332687 KRTAP2-2Q9BYT5 123 aa1.52□□□□□ -2.17
RLIM-201ENST00000332687 KRTAP2-1Q9BYU5 128 aa1.52□□□□□ -2.17
RLIM-201ENST00000332687 MT1AP04731 61 aa1.51□□□□□ -2.17
RLIM-201ENST00000332687 KRTAP4-8A0A0G2JLE6 195 aa1.51□□□□□ -2.17
RLIM-201ENST00000332687 KRTAP4-8Q9BYQ9 185 aa1.51□□□□□ -2.17
RLIM-201ENST00000332687 KRTAP19-2Q3LHN2 52 aa1.5□□□□□ -2.17
RLIM-201ENST00000332687 TNXBP22105 4242 aa1.48□□□□□ -2.17
RLIM-201ENST00000332687 LCE1DQ5T752 114 aa1.47□□□□□ -2.17
RLIM-201ENST00000332687 LCE1BQ5T7P3 118 aa1.45□□□□□ -2.18
RLIM-201ENST00000332687 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.44□□□□□ -2.18
RLIM-201ENST00000332687 LCE5AQ5TCM9 118 aa1.43□□□□□ -2.18
RLIM-201ENST00000332687 MUC19Q7Z5P9 8384 aa1.41□□□□□ -2.18
RLIM-201ENST00000332687 KRTAP9-9Q9BYP9 154 aa1.38□□□□□ -2.19
RLIM-201ENST00000332687 KRTAP9-4Q9BYQ2 154 aa1.38□□□□□ -2.19
RLIM-201ENST00000332687 KRTAP19-7Q3SYF9 63 aa1.38□□□□□ -2.19
RLIM-201ENST00000332687 PRM1P04553 51 aa1.38□□□□□ -2.19
RLIM-201ENST00000332687 AHNAKQ09666 5890 aaKnown RBP1.37□□□□□ -2.19
RLIM-201ENST00000332687 KMT2DO14686 5537 aa1.35□□□□□ -2.19
RLIM-201ENST00000332687 SYNE2Q8WXH0 6885 aaKnown RBP1.34□□□□□ -2.19
RLIM-201ENST00000332687 MACF1Q9UPN3 7388 aaKnown RBP1.32□□□□□ -2.2
RLIM-201ENST00000332687 FCGBPQ9Y6R7 5405 aaPredicted RBP1.32□□□□□ -2.2
RLIM-201ENST00000332687 LCE1CQ5T751 118 aa1.32□□□□□ -2.2
RLIM-201ENST00000332687 LCE1EQ5T753 118 aa1.32□□□□□ -2.2
RLIM-201ENST00000332687 LCE1FQ5T754 118 aa1.32□□□□□ -2.2
RLIM-201ENST00000332687 KRTAP4-7Q9BYR0 210 aa1.32□□□□□ -2.2
RLIM-201ENST00000332687 KRTAP6-2Q3LI66 62 aa1.3□□□□□ -2.2
RLIM-201ENST00000332687 KRTAP5-9P26371 169 aa1.28□□□□□ -2.2
RLIM-201ENST00000332687 MDN1Q9NU22 5596 aa1.28□□□□□ -2.21
RLIM-201ENST00000332687 LOC100996750A0A140TA64 210 aa1.27□□□□□ -2.21
RLIM-201ENST00000332687 KRTAP4-3Q9BYR4 195 aa1.26□□□□□ -2.21
RLIM-201ENST00000332687 KRTAP6-1Q3LI64 71 aa1.25□□□□□ -2.21
RLIM-201ENST00000332687 NEBP20929 6669 aa1.25□□□□□ -2.21
RLIM-201ENST00000332687 AHNAK2Q8IVF2 5795 aa1.25□□□□□ -2.21
RLIM-201ENST00000332687 HMCN1Q96RW7 5635 aa1.23□□□□□ -2.21
RLIM-201ENST00000332687 KRTAP4-9Q9BYQ8 210 aa1.23□□□□□ -2.21
RLIM-201ENST00000332687 MUC12Q9UKN1 5478 aa1.23□□□□□ -2.21
RLIM-201ENST00000332687 KRTAP4-6Q9BYQ5 205 aa1.21□□□□□ -2.22
RLIM-201ENST00000332687 MUC5BQ9HC84 5762 aaPredicted RBP1.19□□□□□ -2.22
RLIM-201ENST00000332687 KRTAP5-4Q6L8H1 288 aa1.18□□□□□ -2.22
RLIM-201ENST00000332687 KRTAP20-2Q3LI61 65 aa1.15□□□□□ -2.23
RLIM-201ENST00000332687 KRTAP9-6A8MVA2 160 aa1.08□□□□□ -2.24
RLIM-201ENST00000332687 KRTAP4-11Q9BYQ6 195 aa1.07□□□□□ -2.24
RLIM-201ENST00000332687 KRTAP4-12Q9BQ66 201 aa1.03□□□□□ -2.24
RLIM-201ENST00000332687 KRTAP5-3Q6L8H2 238 aa1.02□□□□□ -2.25
RLIM-201ENST00000332687 MUC5ACP98088 5654 aa0.97□□□□□ -2.25
RLIM-201ENST00000332687 KRTAP5-5Q701N2 237 aaPredicted RBP0.95□□□□□ -2.26
RLIM-201ENST00000332687 KRTAP4-2Q9BYR5 136 aa0.93□□□□□ -2.26
RLIM-201ENST00000332687 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.91□□□□□ -2.26
RLIM-201ENST00000332687 KRTAP5-7Q6L8G8 165 aa0.86□□□□□ -2.27
RLIM-201ENST00000332687 KRTAP5-2Q701N4 177 aa0.86□□□□□ -2.27
RLIM-201ENST00000332687 PHGR1C9JFL3 82 aa0.85□□□□□ -2.27
RLIM-201ENST00000332687 KRTAP5-8O75690 187 aa0.84□□□□□ -2.27
RLIM-201ENST00000332687 KRTAP4-4Q9BYR3 166 aa0.84□□□□□ -2.27
RLIM-201ENST00000332687 KRTAP5-11Q6L8G4 156 aa0.83□□□□□ -2.28
RLIM-201ENST00000332687 KRTAP5-10Q6L8G5 202 aa0.74□□□□□ -2.29
RLIM-201ENST00000332687 KRTAP5-1Q6L8H4 278 aa0.73□□□□□ -2.29
RLIM-201ENST00000332687 KRTAP21-1Q3LI58 79 aa0.71□□□□□ -2.3
RLIM-201ENST00000332687 KRTAP21-2Q3LI59 83 aa0.68□□□□□ -2.3
RLIM-201ENST00000332687 MUC16Q8WXI7 14507 aa0.53□□□□□ -2.32
Retrieved 77 of 20,778 RNA–protein pairs in 114.1 ms