RNA–Protein interactions for RNA: ENST00000331320.11

MTA1-201, Transcript of metastasis associated 1, humanhuman

TSL 1 (best) BASIC

Gene MTA1, Length 2,876 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTA1-201ENST00000331320 KRTAP19-7Q3SYF9 63 aa5.71□□□□□ -1.5
MTA1-201ENST00000331320 KRTAP2-2Q9BYT5 123 aa5.7□□□□□ -1.5
MTA1-201ENST00000331320 KRTAP4-8A0A0G2JLE6 195 aa5.67□□□□□ -1.5
MTA1-201ENST00000331320 KRTAP4-8Q9BYQ9 185 aa5.67□□□□□ -1.5
MTA1-201ENST00000331320 MT1LQ93083 61 aa5.64□□□□□ -1.51
MTA1-201ENST00000331320 KRTAP6-3Q3LI67 103 aa5.63□□□□□ -1.51
MTA1-201ENST00000331320 FSIP2Q5CZC0 6907 aa5.6□□□□□ -1.51
MTA1-201ENST00000331320 KMT2DO14686 5537 aa5.59□□□□□ -1.52
MTA1-201ENST00000331320 CRCT1Q9UGL9 99 aa5.58□□□□□ -1.52
MTA1-201ENST00000331320 USH2AO75445 5202 aa5.51□□□□□ -1.53
MTA1-201ENST00000331320 MT1EP04732 61 aa5.51□□□□□ -1.53
MTA1-201ENST00000331320 LCE1AQ5T7P2 110 aa5.51□□□□□ -1.53
MTA1-201ENST00000331320 PRM1P04553 51 aa5.48□□□□□ -1.53
MTA1-201ENST00000331320 LOC100996750A0A140TA64 210 aa5.45□□□□□ -1.54
MTA1-201ENST00000331320 SSPOA2VEC9 5147 aa5.43□□□□□ -1.54
MTA1-201ENST00000331320 MT1GP13640 62 aa5.34□□□□□ -1.55
MTA1-201ENST00000331320 KRTAP5-5Q701N2 237 aaPredicted RBP5.34□□□□□ -1.56
MTA1-201ENST00000331320 MT1AP04731 61 aa5.32□□□□□ -1.56
MTA1-201ENST00000331320 KRTAP19-6Q3LI70 58 aa5.3□□□□□ -1.56
MTA1-201ENST00000331320 FCGBPQ9Y6R7 5405 aaPredicted RBP5.29□□□□□ -1.56
MTA1-201ENST00000331320 LCE3EQ5T5B0 92 aa5.26□□□□□ -1.57
MTA1-201ENST00000331320 KRTAP4-9Q9BYQ8 210 aa5.24□□□□□ -1.57
MTA1-201ENST00000331320 KRTAP4-3Q9BYR4 195 aa5.23□□□□□ -1.57
MTA1-201ENST00000331320 LCE3DQ9BYE3 92 aa5.23□□□□□ -1.57
MTA1-201ENST00000331320 SYNE1Q8NF91 8797 aaKnown RBP5.2□□□□□ -1.58
MTA1-201ENST00000331320 LCE3BQ5TA77 95 aa5.2□□□□□ -1.58
MTA1-201ENST00000331320 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.18□□□□□ -1.58
MTA1-201ENST00000331320 LCE1EQ5T753 118 aa5.13□□□□□ -1.59
MTA1-201ENST00000331320 MACF1Q9UPN3 7388 aaKnown RBP5.09□□□□□ -1.59
MTA1-201ENST00000331320 MT1MQ8N339 61 aa5.05□□□□□ -1.6
MTA1-201ENST00000331320 SYNE2Q8WXH0 6885 aaKnown RBP5□□□□□ -1.61
MTA1-201ENST00000331320 KRTAP6-2Q3LI66 62 aa4.98□□□□□ -1.61
MTA1-201ENST00000331320 LCE1DQ5T752 114 aa4.96□□□□□ -1.62
MTA1-201ENST00000331320 KRTAP19-3Q7Z4W3 81 aa4.9□□□□□ -1.62
MTA1-201ENST00000331320 KRTAP4-12Q9BQ66 201 aa4.86□□□□□ -1.63
MTA1-201ENST00000331320 SPRR2FQ96RM1 72 aa4.82□□□□□ -1.64
MTA1-201ENST00000331320 DSTQ03001 7570 aaKnown RBP4.81□□□□□ -1.64
MTA1-201ENST00000331320 KRTAP6-1Q3LI64 71 aa4.79□□□□□ -1.64
MTA1-201ENST00000331320 KRTAP5-9P26371 169 aa4.76□□□□□ -1.65
MTA1-201ENST00000331320 GPR98Q8WXG9 6306 aa4.75□□□□□ -1.65
MTA1-201ENST00000331320 MUC12Q9UKN1 5478 aa4.73□□□□□ -1.65
MTA1-201ENST00000331320 NEBP20929 6669 aa4.68□□□□□ -1.66
MTA1-201ENST00000331320 MDN1Q9NU22 5596 aa4.64□□□□□ -1.67
MTA1-201ENST00000331320 MT3P25713 68 aa4.59□□□□□ -1.67
MTA1-201ENST00000331320 OBSCNQ5VST9 7968 aa4.57□□□□□ -1.68
MTA1-201ENST00000331320 SPRR2EP22531 72 aa4.55□□□□□ -1.68
MTA1-201ENST00000331320 SPRR2BP35325 72 aa4.55□□□□□ -1.68
MTA1-201ENST00000331320 SPRR2AP35326 72 aa4.55□□□□□ -1.68
MTA1-201ENST00000331320 KRTAP20-1Q3LI63 56 aa4.46□□□□□ -1.7
MTA1-201ENST00000331320 SPRR2DP22532 72 aa4.39□□□□□ -1.71
MTA1-201ENST00000331320 KRTAP4-6Q9BYQ5 205 aa4.3□□□□□ -1.72
MTA1-201ENST00000331320 MUC5BQ9HC84 5762 aaPredicted RBP4.14□□□□□ -1.75
MTA1-201ENST00000331320 KRTAP4-11Q9BYQ6 195 aa4.02□□□□□ -1.77
MTA1-201ENST00000331320 AHNAKQ09666 5890 aaKnown RBP3.98□□□□□ -1.77
MTA1-201ENST00000331320 MUC19Q7Z5P9 8384 aa3.91□□□□□ -1.78
MTA1-201ENST00000331320 KRTAP5-7Q6L8G8 165 aa3.9□□□□□ -1.78
MTA1-201ENST00000331320 KRTAP5-4Q6L8H1 288 aa3.86□□□□□ -1.79
MTA1-201ENST00000331320 MT4P47944 62 aa3.82□□□□□ -1.8
MTA1-201ENST00000331320 HMCN1Q96RW7 5635 aa3.8□□□□□ -1.8
MTA1-201ENST00000331320 KRTAP5-10Q6L8G5 202 aa3.69□□□□□ -1.82
MTA1-201ENST00000331320 KRTAP20-2Q3LI61 65 aa3.63□□□□□ -1.83
MTA1-201ENST00000331320 MUC5ACP98088 5654 aa3.63□□□□□ -1.83
MTA1-201ENST00000331320 AHNAK2Q8IVF2 5795 aa3.62□□□□□ -1.83
MTA1-201ENST00000331320 KRTAP4-2Q9BYR5 136 aa3.6□□□□□ -1.83
MTA1-201ENST00000331320 KRTAP21-1Q3LI58 79 aa3.59□□□□□ -1.83
MTA1-201ENST00000331320 KRTAP5-3Q6L8H2 238 aa3.52□□□□□ -1.85
MTA1-201ENST00000331320 KRTAP5-1Q6L8H4 278 aa3.48□□□□□ -1.85
MTA1-201ENST00000331320 LCE1CQ5T751 118 aa3.47□□□□□ -1.85
MTA1-201ENST00000331320 LCE1BQ5T7P3 118 aa3.47□□□□□ -1.85
MTA1-201ENST00000331320 KRTAP5-2Q701N4 177 aa3.46□□□□□ -1.85
MTA1-201ENST00000331320 KRTAP5-8O75690 187 aa3.16□□□□□ -1.9
MTA1-201ENST00000331320 KRTAP21-2Q3LI59 83 aa3.05□□□□□ -1.92
MTA1-201ENST00000331320 KRTAP5-11Q6L8G4 156 aa2.9□□□□□ -1.94
MTA1-201ENST00000331320 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.9□□□□□ -1.95
MTA1-201ENST00000331320 KRTAP4-4Q9BYR3 166 aa2.79□□□□□ -1.96
MTA1-201ENST00000331320 PHGR1C9JFL3 82 aa2.2□□□□□ -2.06
MTA1-201ENST00000331320 MUC16Q8WXI7 14507 aa1.79□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 93.2 ms