RNA–Protein interactions for RNA: ENST00000329970.7

GTF3C6-201, Transcript of general transcription factor IIIC subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C6, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6-201ENST00000329970 MT1LQ93083 61 aa4.83□□□□□ -1.64
GTF3C6-201ENST00000329970 A8MU10 97 aa4.79□□□□□ -1.64
GTF3C6-201ENST00000329970 TNP1P09430 55 aa4.78□□□□□ -1.64
GTF3C6-201ENST00000329970 LCE3AQ5TA76 89 aa4.77□□□□□ -1.65
GTF3C6-201ENST00000329970 C10orf95Q9H7T3 257 aa4.76□□□□□ -1.65
GTF3C6-201ENST00000329970 ANAPC13Q9BS18 74 aa4.72□□□□□ -1.65
GTF3C6-201ENST00000329970 HMCN1Q96RW7 5635 aa4.72□□□□□ -1.65
GTF3C6-201ENST00000329970 KRTAP5-4Q6L8H1 288 aa4.71□□□□□ -1.66
GTF3C6-201ENST00000329970 PRR15LQ9BU68 103 aa4.7□□□□□ -1.66
GTF3C6-201ENST00000329970 ATP5EP56381 51 aaPredicted RBP4.69□□□□□ -1.66
GTF3C6-201ENST00000329970 MT4P47944 62 aa4.68□□□□□ -1.66
GTF3C6-201ENST00000329970 KRTAP4-3Q9BYR4 195 aa4.66□□□□□ -1.66
GTF3C6-201ENST00000329970 LINC01558Q9Y6Z2 57 aa4.65□□□□□ -1.67
GTF3C6-201ENST00000329970 CCDC179H3BU77 68 aa4.62□□□□□ -1.67
GTF3C6-201ENST00000329970 KRTAP12-3P60328 96 aa4.6□□□□□ -1.67
GTF3C6-201ENST00000329970 AHNAK2Q8IVF2 5795 aa4.57□□□□□ -1.68
GTF3C6-201ENST00000329970 UQCR11O14957 56 aa4.55□□□□□ -1.68
GTF3C6-201ENST00000329970 KRTAP5-10Q6L8G5 202 aa4.53□□□□□ -1.68
GTF3C6-201ENST00000329970 TMEM258P61165 79 aa4.49□□□□□ -1.69
GTF3C6-201ENST00000329970 KRTAP25-1Q3LHN0 102 aa4.48□□□□□ -1.69
GTF3C6-201ENST00000329970 KRTAP5-5Q701N2 237 aaPredicted RBP4.48□□□□□ -1.69
GTF3C6-201ENST00000329970 SPRR5A0A1B0GTR4 108 aa4.43□□□□□ -1.7
GTF3C6-201ENST00000329970 KRTAP20-2Q3LI61 65 aa4.42□□□□□ -1.7
GTF3C6-201ENST00000329970 MIR22HGQ0VDD5 57 aa4.41□□□□□ -1.7
GTF3C6-201ENST00000329970 KRTAP5-7Q6L8G8 165 aa4.38□□□□□ -1.71
GTF3C6-201ENST00000329970 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.38□□□□□ -1.71
GTF3C6-201ENST00000329970 KRTAP23-1A1A580 65 aa4.36□□□□□ -1.71
GTF3C6-201ENST00000329970 K7ERS5 55 aa4.36□□□□□ -1.71
GTF3C6-201ENST00000329970 KRTAP12-4P60329 112 aa4.36□□□□□ -1.71
GTF3C6-201ENST00000329970 SYNE1Q8NF91 8797 aaKnown RBP4.33□□□□□ -1.72
GTF3C6-201ENST00000329970 H3BS24 57 aa4.33□□□□□ -1.72
GTF3C6-201ENST00000329970 V9GYY9 64 aa4.3□□□□□ -1.72
GTF3C6-201ENST00000329970 KRTAP15-1Q3LI76 137 aa4.27□□□□□ -1.73
GTF3C6-201ENST00000329970 Q1T7F1 81 aa4.26□□□□□ -1.73
GTF3C6-201ENST00000329970 LCE3CQ5T5A8 94 aa4.23□□□□□ -1.73
GTF3C6-201ENST00000329970 PSPHP1O15172 72 aa4.22□□□□□ -1.73
GTF3C6-201ENST00000329970 MT1AP04731 61 aa4.12□□□□□ -1.75
GTF3C6-201ENST00000329970 CDC42SE1Q9NRR8 79 aa4.12□□□□□ -1.75
GTF3C6-201ENST00000329970 KRTAP5-2Q701N4 177 aa4.11□□□□□ -1.75
GTF3C6-201ENST00000329970 A6NED7 52 aa4.09□□□□□ -1.75
GTF3C6-201ENST00000329970 KRTAP6-1Q3LI64 71 aa4.07□□□□□ -1.76
GTF3C6-201ENST00000329970 KRTAP5-11Q6L8G4 156 aa4.05□□□□□ -1.76
GTF3C6-201ENST00000329970 ROMO1P60602 79 aa4.03□□□□□ -1.76
GTF3C6-201ENST00000329970 RPS28P62857 69 aaKnown RBP4.02□□□□□ -1.77
GTF3C6-201ENST00000329970 KRTAP9-6A8MVA2 160 aa3.98□□□□□ -1.77
GTF3C6-201ENST00000329970 KRTAP5-8O75690 187 aa3.94□□□□□ -1.78
GTF3C6-201ENST00000329970 OBSCNQ5VST9 7968 aa3.91□□□□□ -1.78
GTF3C6-201ENST00000329970 KRTAP6-2Q3LI66 62 aa3.9□□□□□ -1.79
GTF3C6-201ENST00000329970 MUC5BQ9HC84 5762 aaPredicted RBP3.79□□□□□ -1.8
GTF3C6-201ENST00000329970 MUC5ACP98088 5654 aa3.79□□□□□ -1.8
GTF3C6-201ENST00000329970 MT3P25713 68 aa3.77□□□□□ -1.81
GTF3C6-201ENST00000329970 AHNAKQ09666 5890 aaKnown RBP3.75□□□□□ -1.81
GTF3C6-201ENST00000329970 KRTAP5-1Q6L8H4 278 aa3.72□□□□□ -1.81
GTF3C6-201ENST00000329970 PCP4P48539 62 aa3.65□□□□□ -1.83
GTF3C6-201ENST00000329970 KRTAP4-4Q9BYR3 166 aa3.63□□□□□ -1.83
GTF3C6-201ENST00000329970 LCE1EQ5T753 118 aa3.56□□□□□ -1.84
GTF3C6-201ENST00000329970 SVIPQ8NHG7 77 aa3.39□□□□□ -1.87
GTF3C6-201ENST00000329970 BRK1Q8WUW1 75 aa3.34□□□□□ -1.87
GTF3C6-201ENST00000329970 LCE1CQ5T751 118 aa3.27□□□□□ -1.89
GTF3C6-201ENST00000329970 LCE1BQ5T7P3 118 aa3.27□□□□□ -1.89
GTF3C6-201ENST00000329970 PMAIP1Q13794 54 aa3.14□□□□□ -1.91
GTF3C6-201ENST00000329970 PRAC1Q96KF2 57 aa3.03□□□□□ -1.92
GTF3C6-201ENST00000329970 LCE3DQ9BYE3 92 aa3.03□□□□□ -1.92
GTF3C6-201ENST00000329970 LCE1FQ5T754 118 aa2.94□□□□□ -1.94
GTF3C6-201ENST00000329970 LCE3EQ5T5B0 92 aa2.83□□□□□ -1.96
GTF3C6-201ENST00000329970 A0A0A0MQY5 61 aa2.79□□□□□ -1.96
GTF3C6-201ENST00000329970 PRO0628Q9UI54 55 aa2.79□□□□□ -1.96
GTF3C6-201ENST00000329970 KTN1-AS1Q86SY8 53 aa2.71□□□□□ -1.98
GTF3C6-201ENST00000329970 KRTAP21-2Q3LI59 83 aa2.7□□□□□ -1.98
GTF3C6-201ENST00000329970 LUZP6Q538Z0 58 aa2.63□□□□□ -1.99
GTF3C6-201ENST00000329970 PHGR1C9JFL3 82 aa2.61□□□□□ -1.99
GTF3C6-201ENST00000329970 MUC19Q7Z5P9 8384 aa2.39□□□□□ -2.03
GTF3C6-201ENST00000329970 NDUFAF8A1L188 74 aa2.25□□□□□ -2.05
GTF3C6-201ENST00000329970 PRM1P04553 51 aa2.03□□□□□ -2.08
GTF3C6-201ENST00000329970 KRTAP21-1Q3LI58 79 aa2.01□□□□□ -2.09
GTF3C6-201ENST00000329970 MUC16Q8WXI7 14507 aa1.72□□□□□ -2.13
GTF3C6-201ENST00000329970 INE1O15225 51 aa1.54□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 13 ms