RNA–Protein interactions for RNA: ENST00000320017.10

SCAP-202, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 3,430 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-202ENST00000320017 CRCT1Q9UGL9 99 aa5.11□□□□□ -1.59
SCAP-202ENST00000320017 KRTAP12-4P60329 112 aa5.07□□□□□ -1.6
SCAP-202ENST00000320017 KRTAP19-7Q3SYF9 63 aa5.03□□□□□ -1.6
SCAP-202ENST00000320017 MACF1Q9UPN3 7388 aaKnown RBP5.01□□□□□ -1.61
SCAP-202ENST00000320017 SYNE2Q8WXH0 6885 aaKnown RBP5.01□□□□□ -1.61
SCAP-202ENST00000320017 SYNE1Q8NF91 8797 aaKnown RBP5□□□□□ -1.61
SCAP-202ENST00000320017 OBSCNQ5VST9 7968 aa5□□□□□ -1.61
SCAP-202ENST00000320017 KRTAP19-6Q3LI70 58 aa4.98□□□□□ -1.61
SCAP-202ENST00000320017 KRTAP4-3Q9BYR4 195 aa4.98□□□□□ -1.61
SCAP-202ENST00000320017 LOC100996750A0A140TA64 210 aa4.97□□□□□ -1.61
SCAP-202ENST00000320017 MT1LQ93083 61 aa4.9□□□□□ -1.63
SCAP-202ENST00000320017 SPRR2FQ96RM1 72 aa4.88□□□□□ -1.63
SCAP-202ENST00000320017 KRTAP9-2Q9BYQ4 174 aa4.88□□□□□ -1.63
SCAP-202ENST00000320017 MT1EP04732 61 aa4.86□□□□□ -1.63
SCAP-202ENST00000320017 MT1GP13640 62 aa4.86□□□□□ -1.63
SCAP-202ENST00000320017 MDN1Q9NU22 5596 aa4.78□□□□□ -1.64
SCAP-202ENST00000320017 KRTAP4-9Q9BYQ8 210 aa4.67□□□□□ -1.66
SCAP-202ENST00000320017 LCE3BQ5TA77 95 aa4.65□□□□□ -1.67
SCAP-202ENST00000320017 KRTAP19-3Q7Z4W3 81 aa4.63□□□□□ -1.67
SCAP-202ENST00000320017 PRM1P04553 51 aa4.59□□□□□ -1.67
SCAP-202ENST00000320017 MT1MQ8N339 61 aa4.59□□□□□ -1.68
SCAP-202ENST00000320017 KRTAP19-4Q3LI73 84 aa4.57□□□□□ -1.68
SCAP-202ENST00000320017 KRTAP9-7A8MTY7 169 aa4.55□□□□□ -1.68
SCAP-202ENST00000320017 SPRR2EP22531 72 aa4.49□□□□□ -1.69
SCAP-202ENST00000320017 SPRR2BP35325 72 aa4.49□□□□□ -1.69
SCAP-202ENST00000320017 SPRR2AP35326 72 aa4.49□□□□□ -1.69
SCAP-202ENST00000320017 LCE5AQ5TCM9 118 aa4.43□□□□□ -1.7
SCAP-202ENST00000320017 LCE3DQ9BYE3 92 aa4.42□□□□□ -1.7
SCAP-202ENST00000320017 LCE3EQ5T5B0 92 aa4.4□□□□□ -1.71
SCAP-202ENST00000320017 LCE1AQ5T7P2 110 aa4.37□□□□□ -1.71
SCAP-202ENST00000320017 KRTAP9-6A0A140TA67 174 aa4.34□□□□□ -1.72
SCAP-202ENST00000320017 KRTAP6-3Q3LI67 103 aa4.33□□□□□ -1.72
SCAP-202ENST00000320017 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.31□□□□□ -1.72
SCAP-202ENST00000320017 KRTAP5-5Q701N2 237 aaPredicted RBP4.3□□□□□ -1.72
SCAP-202ENST00000320017 SPRR2DP22532 72 aa4.29□□□□□ -1.72
SCAP-202ENST00000320017 KRTAP6-1Q3LI64 71 aa4.27□□□□□ -1.73
SCAP-202ENST00000320017 KRTAP5-9P26371 169 aa4.23□□□□□ -1.73
SCAP-202ENST00000320017 MT1AP04731 61 aa4.2□□□□□ -1.74
SCAP-202ENST00000320017 KRTAP6-2Q3LI66 62 aa4.18□□□□□ -1.74
SCAP-202ENST00000320017 KRTAP2-2Q9BYT5 123 aa4.15□□□□□ -1.74
SCAP-202ENST00000320017 LCE1EQ5T753 118 aa4.1□□□□□ -1.75
SCAP-202ENST00000320017 NEBP20929 6669 aa4.01□□□□□ -1.77
SCAP-202ENST00000320017 MT4P47944 62 aa3.94□□□□□ -1.78
SCAP-202ENST00000320017 LCE1DQ5T752 114 aa3.89□□□□□ -1.79
SCAP-202ENST00000320017 KRTAP9-4Q9BYQ2 154 aa3.79□□□□□ -1.8
SCAP-202ENST00000320017 KRTAP4-6Q9BYQ5 205 aa3.77□□□□□ -1.81
SCAP-202ENST00000320017 MT3P25713 68 aa3.7□□□□□ -1.82
SCAP-202ENST00000320017 HMCN1Q96RW7 5635 aa3.68□□□□□ -1.82
SCAP-202ENST00000320017 KRTAP20-1Q3LI63 56 aa3.58□□□□□ -1.84
SCAP-202ENST00000320017 KRTAP5-4Q6L8H1 288 aa3.53□□□□□ -1.85
SCAP-202ENST00000320017 KRTAP20-2Q3LI61 65 aa3.51□□□□□ -1.85
SCAP-202ENST00000320017 LCE4AQ5TA78 99 aa3.49□□□□□ -1.85
SCAP-202ENST00000320017 MUC19Q7Z5P9 8384 aa3.47□□□□□ -1.85
SCAP-202ENST00000320017 KRTAP4-11Q9BYQ6 195 aa3.47□□□□□ -1.85
SCAP-202ENST00000320017 LCE1FQ5T754 118 aa3.34□□□□□ -1.88
SCAP-202ENST00000320017 LCE1BQ5T7P3 118 aa3.33□□□□□ -1.88
SCAP-202ENST00000320017 MUC5ACP98088 5654 aa3.28□□□□□ -1.88
SCAP-202ENST00000320017 KRTAP9-9Q9BYP9 154 aa3.25□□□□□ -1.89
SCAP-202ENST00000320017 KRTAP5-3Q6L8H2 238 aa3.22□□□□□ -1.89
SCAP-202ENST00000320017 KRTAP5-2Q701N4 177 aa3.21□□□□□ -1.9
SCAP-202ENST00000320017 AHNAK2Q8IVF2 5795 aa3.08□□□□□ -1.92
SCAP-202ENST00000320017 KRTAP5-10Q6L8G5 202 aa3.02□□□□□ -1.93
SCAP-202ENST00000320017 MUC5BQ9HC84 5762 aaPredicted RBP2.92□□□□□ -1.94
SCAP-202ENST00000320017 GPR98Q8WXG9 6306 aa2.91□□□□□ -1.94
SCAP-202ENST00000320017 KRTAP5-1Q6L8H4 278 aa2.87□□□□□ -1.95
SCAP-202ENST00000320017 KRTAP4-4Q9BYR3 166 aa2.87□□□□□ -1.95
SCAP-202ENST00000320017 KRTAP4-2Q9BYR5 136 aa2.85□□□□□ -1.95
SCAP-202ENST00000320017 KRTAP5-8O75690 187 aa2.8□□□□□ -1.96
SCAP-202ENST00000320017 KRTAP5-7Q6L8G8 165 aa2.79□□□□□ -1.96
SCAP-202ENST00000320017 LCE1CQ5T751 118 aa2.75□□□□□ -1.97
SCAP-202ENST00000320017 KRTAP4-12Q9BQ66 201 aa2.74□□□□□ -1.97
SCAP-202ENST00000320017 KRTAP21-1Q3LI58 79 aa2.72□□□□□ -1.97
SCAP-202ENST00000320017 KRTAP21-2Q3LI59 83 aa2.62□□□□□ -1.99
SCAP-202ENST00000320017 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.54□□□□□ -2
SCAP-202ENST00000320017 KRTAP5-11Q6L8G4 156 aa2.38□□□□□ -2.03
SCAP-202ENST00000320017 AHNAKQ09666 5890 aaKnown RBP2.33□□□□□ -2.04
SCAP-202ENST00000320017 PHGR1C9JFL3 82 aa2.09□□□□□ -2.07
SCAP-202ENST00000320017 MUC16Q8WXI7 14507 aa1.39□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 11.8 ms