RNA–Protein interactions for RNA: ENST00000311371.9

SOX30-202, Transcript of SRY-box 30, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX30, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30-202ENST00000311371 CRCT1Q9UGL9 99 aa5.37□□□□□ -1.55
SOX30-202ENST00000311371 KRTAP19-7Q3SYF9 63 aa5.32□□□□□ -1.56
SOX30-202ENST00000311371 MT1LQ93083 61 aa5.22□□□□□ -1.57
SOX30-202ENST00000311371 LOC100996750A0A140TA64 210 aa5.21□□□□□ -1.58
SOX30-202ENST00000311371 KRTAP9-6A0A140TA67 174 aa5.19□□□□□ -1.58
SOX30-202ENST00000311371 MACF1Q9UPN3 7388 aaKnown RBP5.16□□□□□ -1.58
SOX30-202ENST00000311371 MT1EP04732 61 aa5.09□□□□□ -1.59
SOX30-202ENST00000311371 KRTAP19-4Q3LI73 84 aa5.07□□□□□ -1.6
SOX30-202ENST00000311371 KRTAP4-3Q9BYR4 195 aa5.07□□□□□ -1.6
SOX30-202ENST00000311371 MT1GP13640 62 aa5.07□□□□□ -1.6
SOX30-202ENST00000311371 SYNE2Q8WXH0 6885 aaKnown RBP5.03□□□□□ -1.6
SOX30-202ENST00000311371 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.99□□□□□ -1.61
SOX30-202ENST00000311371 KRTAP4-9Q9BYQ8 210 aa4.98□□□□□ -1.61
SOX30-202ENST00000311371 MUC12Q9UKN1 5478 aa4.93□□□□□ -1.62
SOX30-202ENST00000311371 KRTAP9-7A8MTY7 169 aa4.93□□□□□ -1.62
SOX30-202ENST00000311371 PRM1P04553 51 aa4.93□□□□□ -1.62
SOX30-202ENST00000311371 LCE3BQ5TA77 95 aa4.91□□□□□ -1.62
SOX30-202ENST00000311371 SPRR2FQ96RM1 72 aa4.89□□□□□ -1.63
SOX30-202ENST00000311371 SYNE1Q8NF91 8797 aaKnown RBP4.85□□□□□ -1.63
SOX30-202ENST00000311371 KRTAP6-3Q3LI67 103 aa4.83□□□□□ -1.64
SOX30-202ENST00000311371 KRTAP5-9P26371 169 aa4.82□□□□□ -1.64
SOX30-202ENST00000311371 MDN1Q9NU22 5596 aa4.78□□□□□ -1.64
SOX30-202ENST00000311371 KRTAP5-5Q701N2 237 aaPredicted RBP4.78□□□□□ -1.64
SOX30-202ENST00000311371 LCE1AQ5T7P2 110 aa4.74□□□□□ -1.65
SOX30-202ENST00000311371 DSTQ03001 7570 aaKnown RBP4.73□□□□□ -1.65
SOX30-202ENST00000311371 LCE3DQ9BYE3 92 aa4.73□□□□□ -1.65
SOX30-202ENST00000311371 MT1MQ8N339 61 aa4.72□□□□□ -1.65
SOX30-202ENST00000311371 LCE3EQ5T5B0 92 aa4.72□□□□□ -1.65
SOX30-202ENST00000311371 KRTAP4-6Q9BYQ5 205 aa4.72□□□□□ -1.65
SOX30-202ENST00000311371 KRTAP19-3Q7Z4W3 81 aa4.69□□□□□ -1.66
SOX30-202ENST00000311371 KRTAP2-2Q9BYT5 123 aa4.69□□□□□ -1.66
SOX30-202ENST00000311371 MT1AP04731 61 aa4.66□□□□□ -1.66
SOX30-202ENST00000311371 SPRR2EP22531 72 aa4.66□□□□□ -1.66
SOX30-202ENST00000311371 SPRR2BP35325 72 aa4.66□□□□□ -1.66
SOX30-202ENST00000311371 SPRR2AP35326 72 aa4.66□□□□□ -1.66
SOX30-202ENST00000311371 LCE5AQ5TCM9 118 aa4.63□□□□□ -1.67
SOX30-202ENST00000311371 KRTAP6-2Q3LI66 62 aa4.52□□□□□ -1.69
SOX30-202ENST00000311371 KRTAP6-1Q3LI64 71 aa4.5□□□□□ -1.69
SOX30-202ENST00000311371 NEBP20929 6669 aa4.5□□□□□ -1.69
SOX30-202ENST00000311371 SPRR2DP22532 72 aa4.48□□□□□ -1.69
SOX30-202ENST00000311371 OBSCNQ5VST9 7968 aa4.46□□□□□ -1.7
SOX30-202ENST00000311371 LCE1EQ5T753 118 aa4.46□□□□□ -1.7
SOX30-202ENST00000311371 LCE1DQ5T752 114 aa4.28□□□□□ -1.72
SOX30-202ENST00000311371 KRTAP20-1Q3LI63 56 aa4.18□□□□□ -1.74
SOX30-202ENST00000311371 KRTAP9-4Q9BYQ2 154 aa4.01□□□□□ -1.77
SOX30-202ENST00000311371 KRTAP5-4Q6L8H1 288 aa4□□□□□ -1.77
SOX30-202ENST00000311371 MT4P47944 62 aa3.94□□□□□ -1.78
SOX30-202ENST00000311371 LCE4AQ5TA78 99 aa3.92□□□□□ -1.78
SOX30-202ENST00000311371 HMCN1Q96RW7 5635 aa3.85□□□□□ -1.79
SOX30-202ENST00000311371 MT3P25713 68 aa3.84□□□□□ -1.8
SOX30-202ENST00000311371 KRTAP20-2Q3LI61 65 aa3.77□□□□□ -1.81
SOX30-202ENST00000311371 KRTAP9-9Q9BYP9 154 aa3.71□□□□□ -1.82
SOX30-202ENST00000311371 KRTAP4-11Q9BYQ6 195 aa3.7□□□□□ -1.82
SOX30-202ENST00000311371 LCE1FQ5T754 118 aa3.67□□□□□ -1.82
SOX30-202ENST00000311371 KRTAP4-12Q9BQ66 201 aa3.67□□□□□ -1.82
SOX30-202ENST00000311371 KRTAP5-3Q6L8H2 238 aa3.63□□□□□ -1.83
SOX30-202ENST00000311371 KRTAP5-2Q701N4 177 aa3.6□□□□□ -1.83
SOX30-202ENST00000311371 KRTAP4-2Q9BYR5 136 aa3.57□□□□□ -1.84
SOX30-202ENST00000311371 AHNAK2Q8IVF2 5795 aa3.43□□□□□ -1.86
SOX30-202ENST00000311371 MUC5ACP98088 5654 aa3.43□□□□□ -1.86
SOX30-202ENST00000311371 MUC19Q7Z5P9 8384 aa3.37□□□□□ -1.87
SOX30-202ENST00000311371 KRTAP5-10Q6L8G5 202 aa3.33□□□□□ -1.88
SOX30-202ENST00000311371 LCE1BQ5T7P3 118 aa3.18□□□□□ -1.9
SOX30-202ENST00000311371 KRTAP5-8O75690 187 aa3.18□□□□□ -1.9
SOX30-202ENST00000311371 GPR98Q8WXG9 6306 aa3.17□□□□□ -1.9
SOX30-202ENST00000311371 KRTAP5-1Q6L8H4 278 aa3.16□□□□□ -1.9
SOX30-202ENST00000311371 KRTAP21-1Q3LI58 79 aa3.07□□□□□ -1.92
SOX30-202ENST00000311371 LCE1CQ5T751 118 aa3.01□□□□□ -1.93
SOX30-202ENST00000311371 KRTAP5-7Q6L8G8 165 aa3□□□□□ -1.93
SOX30-202ENST00000311371 KRTAP21-2Q3LI59 83 aa2.81□□□□□ -1.96
SOX30-202ENST00000311371 MUC5BQ9HC84 5762 aaPredicted RBP2.81□□□□□ -1.96
SOX30-202ENST00000311371 KRTAP4-4Q9BYR3 166 aa2.81□□□□□ -1.96
SOX30-202ENST00000311371 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.74□□□□□ -1.97
SOX30-202ENST00000311371 KRTAP5-11Q6L8G4 156 aa2.62□□□□□ -1.99
SOX30-202ENST00000311371 AHNAKQ09666 5890 aaKnown RBP2.58□□□□□ -2
SOX30-202ENST00000311371 PHGR1C9JFL3 82 aa2.26□□□□□ -2.05
SOX30-202ENST00000311371 MUC16Q8WXI7 14507 aa1.53□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 96.1 ms