RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 MT1LQ93083 61 aa7.08□□□□□ -1.28
PDZRN3-202ENST00000308537 LCE3AQ5TA76 89 aa7.06□□□□□ -1.28
PDZRN3-202ENST00000308537 MT1MQ8N339 61 aa7.06□□□□□ -1.28
PDZRN3-202ENST00000308537 RPS28P62857 69 aaKnown RBP7.04□□□□□ -1.28
PDZRN3-202ENST00000308537 KRTAP4-9Q9BYQ8 210 aa7.03□□□□□ -1.28
PDZRN3-202ENST00000308537 PP632Q6XCG6 107 aa6.99□□□□□ -1.29
PDZRN3-202ENST00000308537 A6NED7 52 aa6.98□□□□□ -1.29
PDZRN3-202ENST00000308537 KRTAP4-3Q9BYR4 195 aa6.92□□□□□ -1.3
PDZRN3-202ENST00000308537 KRTAP25-1Q3LHN0 102 aa6.89□□□□□ -1.31
PDZRN3-202ENST00000308537 LCE1DQ5T752 114 aa6.88□□□□□ -1.31
PDZRN3-202ENST00000308537 GPR98Q8WXG9 6306 aa6.88□□□□□ -1.31
PDZRN3-202ENST00000308537 LCE4AQ5TA78 99 aa6.84□□□□□ -1.31
PDZRN3-202ENST00000308537 KRTAP5-4Q6L8H1 288 aa6.8□□□□□ -1.32
PDZRN3-202ENST00000308537 HMCN1Q96RW7 5635 aa6.77□□□□□ -1.33
PDZRN3-202ENST00000308537 KRTAP12-3P60328 96 aa6.76□□□□□ -1.33
PDZRN3-202ENST00000308537 MT4P47944 62 aa6.75□□□□□ -1.33
PDZRN3-202ENST00000308537 KRTAP4-7Q9BYR0 210 aa6.75□□□□□ -1.33
PDZRN3-202ENST00000308537 CDC42SE1Q9NRR8 79 aa6.72□□□□□ -1.33
PDZRN3-202ENST00000308537 KRTAP23-1A1A580 65 aa6.65□□□□□ -1.34
PDZRN3-202ENST00000308537 KRTAP4-6Q9BYQ5 205 aa6.64□□□□□ -1.35
PDZRN3-202ENST00000308537 ROMO1P60602 79 aa6.59□□□□□ -1.35
PDZRN3-202ENST00000308537 KRTAP5-5Q701N2 237 aaPredicted RBP6.54□□□□□ -1.36
PDZRN3-202ENST00000308537 AHNAK2Q8IVF2 5795 aa6.54□□□□□ -1.36
PDZRN3-202ENST00000308537 KRTAP19-4Q3LI73 84 aa6.5□□□□□ -1.37
PDZRN3-202ENST00000308537 KRTAP5-10Q6L8G5 202 aa6.46□□□□□ -1.38
PDZRN3-202ENST00000308537 LOC100996750A0A140TA64 210 aa6.4□□□□□ -1.38
PDZRN3-202ENST00000308537 KRTAP15-1Q3LI76 137 aa6.39□□□□□ -1.39
PDZRN3-202ENST00000308537 SVIPQ8NHG7 77 aa6.39□□□□□ -1.39
PDZRN3-202ENST00000308537 KRTAP20-2Q3LI61 65 aa6.38□□□□□ -1.39
PDZRN3-202ENST00000308537 SYNE1Q8NF91 8797 aaKnown RBP6.37□□□□□ -1.39
PDZRN3-202ENST00000308537 SPRR5A0A1B0GTR4 108 aa6.32□□□□□ -1.4
PDZRN3-202ENST00000308537 KRTAP5-3Q6L8H2 238 aa6.28□□□□□ -1.4
PDZRN3-202ENST00000308537 LCE3CQ5T5A8 94 aa6.23□□□□□ -1.41
PDZRN3-202ENST00000308537 KRTAP12-4P60329 112 aa6.21□□□□□ -1.42
PDZRN3-202ENST00000308537 BRK1Q8WUW1 75 aa6.21□□□□□ -1.42
PDZRN3-202ENST00000308537 KRTAP5-7Q6L8G8 165 aa6.18□□□□□ -1.42
PDZRN3-202ENST00000308537 MT1AP04731 61 aa6.01□□□□□ -1.45
PDZRN3-202ENST00000308537 KRTAP9-6A8MVA2 160 aa6□□□□□ -1.45
PDZRN3-202ENST00000308537 KRTAP6-1Q3LI64 71 aa6□□□□□ -1.45
PDZRN3-202ENST00000308537 KRTAP5-2Q701N4 177 aa5.97□□□□□ -1.45
PDZRN3-202ENST00000308537 PMAIP1Q13794 54 aa5.88□□□□□ -1.47
PDZRN3-202ENST00000308537 KRTAP4-11Q9BYQ6 195 aa5.81□□□□□ -1.48
PDZRN3-202ENST00000308537 KRTAP9-4Q9BYQ2 154 aa5.8□□□□□ -1.48
PDZRN3-202ENST00000308537 KRTAP6-2Q3LI66 62 aa5.71□□□□□ -1.5
PDZRN3-202ENST00000308537 KRTAP5-8O75690 187 aa5.67□□□□□ -1.5
PDZRN3-202ENST00000308537 OBSCNQ5VST9 7968 aa5.6□□□□□ -1.51
PDZRN3-202ENST00000308537 PRO0628Q9UI54 55 aa5.59□□□□□ -1.51
PDZRN3-202ENST00000308537 PRAC1Q96KF2 57 aa5.5□□□□□ -1.53
PDZRN3-202ENST00000308537 MT3P25713 68 aa5.44□□□□□ -1.54
PDZRN3-202ENST00000308537 MUC5BQ9HC84 5762 aaPredicted RBP5.38□□□□□ -1.55
PDZRN3-202ENST00000308537 MUC5ACP98088 5654 aa5.37□□□□□ -1.55
PDZRN3-202ENST00000308537 KRTAP5-1Q6L8H4 278 aa5.35□□□□□ -1.55
PDZRN3-202ENST00000308537 AHNAKQ09666 5890 aaKnown RBP5.33□□□□□ -1.56
PDZRN3-202ENST00000308537 KTN1-AS1Q86SY8 53 aa5.31□□□□□ -1.56
PDZRN3-202ENST00000308537 KRTAP9-9Q9BYP9 154 aa5.26□□□□□ -1.57
PDZRN3-202ENST00000308537 LCE1EQ5T753 118 aa5.05□□□□□ -1.6
PDZRN3-202ENST00000308537 KRTAP4-2Q9BYR5 136 aa4.84□□□□□ -1.63
PDZRN3-202ENST00000308537 LUZP6Q538Z0 58 aa4.82□□□□□ -1.64
PDZRN3-202ENST00000308537 LCE1CQ5T751 118 aa4.7□□□□□ -1.66
PDZRN3-202ENST00000308537 LCE1BQ5T7P3 118 aa4.7□□□□□ -1.66
PDZRN3-202ENST00000308537 H3BS24 57 aa4.67□□□□□ -1.66
PDZRN3-202ENST00000308537 A0A0A0MQY5 61 aa4.58□□□□□ -1.68
PDZRN3-202ENST00000308537 LCE3DQ9BYE3 92 aa4.56□□□□□ -1.68
PDZRN3-202ENST00000308537 LCE3EQ5T5B0 92 aa4.33□□□□□ -1.72
PDZRN3-202ENST00000308537 KRTAP4-12Q9BQ66 201 aa4.33□□□□□ -1.72
PDZRN3-202ENST00000308537 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.32□□□□□ -1.72
PDZRN3-202ENST00000308537 KRTAP5-11Q6L8G4 156 aa4.28□□□□□ -1.72
PDZRN3-202ENST00000308537 LCE1FQ5T754 118 aa4.13□□□□□ -1.75
PDZRN3-202ENST00000308537 KRTAP21-2Q3LI59 83 aa3.99□□□□□ -1.77
PDZRN3-202ENST00000308537 NDUFAF8A1L188 74 aa3.93□□□□□ -1.78
PDZRN3-202ENST00000308537 PHGR1C9JFL3 82 aa3.69□□□□□ -1.82
PDZRN3-202ENST00000308537 KRTAP4-4Q9BYR3 166 aa3.6□□□□□ -1.83
PDZRN3-202ENST00000308537 MUC19Q7Z5P9 8384 aa3.49□□□□□ -1.85
PDZRN3-202ENST00000308537 PRM1P04553 51 aa3.34□□□□□ -1.87
PDZRN3-202ENST00000308537 INE1O15225 51 aa3.28□□□□□ -1.88
PDZRN3-202ENST00000308537 KRTAP21-1Q3LI58 79 aa2.79□□□□□ -1.96
PDZRN3-202ENST00000308537 MUC16Q8WXI7 14507 aa2.43□□□□□ -2.02
Retrieved 77 of 20,778 RNA–protein pairs in 11.4 ms