RNA–Protein interactions for RNA: ENST00000301717.8

SPSB3-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-201ENST00000301717 PRAC1Q96KF2 57 aa6.73□□□□□ -1.33
SPSB3-201ENST00000301717 LCE3AQ5TA76 89 aa6.69□□□□□ -1.34
SPSB3-201ENST00000301717 TNP1P09430 55 aa6.68□□□□□ -1.34
SPSB3-201ENST00000301717 LCE3BQ5TA77 95 aa6.67□□□□□ -1.34
SPSB3-201ENST00000301717 KRTAP2-2Q9BYT5 123 aa6.67□□□□□ -1.34
SPSB3-201ENST00000301717 KRTAP2-1Q9BYU5 128 aa6.67□□□□□ -1.34
SPSB3-201ENST00000301717 KRTAP19-3Q7Z4W3 81 aa6.66□□□□□ -1.34
SPSB3-201ENST00000301717 ROMO1P60602 79 aa6.65□□□□□ -1.35
SPSB3-201ENST00000301717 LCE5AQ5TCM9 118 aa6.65□□□□□ -1.35
SPSB3-201ENST00000301717 DSTQ03001 7570 aaKnown RBP6.53□□□□□ -1.36
SPSB3-201ENST00000301717 KRTAP25-1Q3LHN0 102 aa6.51□□□□□ -1.37
SPSB3-201ENST00000301717 MT1LQ93083 61 aa6.5□□□□□ -1.37
SPSB3-201ENST00000301717 MT1GP13640 62 aa6.48□□□□□ -1.37
SPSB3-201ENST00000301717 MT1MQ8N339 61 aa6.44□□□□□ -1.38
SPSB3-201ENST00000301717 PP632Q6XCG6 107 aa6.39□□□□□ -1.39
SPSB3-201ENST00000301717 KRTAP12-3P60328 96 aa6.38□□□□□ -1.39
SPSB3-201ENST00000301717 KRTAP4-3Q9BYR4 195 aa6.38□□□□□ -1.39
SPSB3-201ENST00000301717 KRTAP4-7Q9BYR0 210 aa6.29□□□□□ -1.4
SPSB3-201ENST00000301717 KRTAP4-9Q9BYQ8 210 aa6.23□□□□□ -1.41
SPSB3-201ENST00000301717 KRTAP23-1A1A580 65 aa6.22□□□□□ -1.41
SPSB3-201ENST00000301717 LCE1DQ5T752 114 aa6.07□□□□□ -1.44
SPSB3-201ENST00000301717 MT4P47944 62 aa6.06□□□□□ -1.44
SPSB3-201ENST00000301717 LCE4AQ5TA78 99 aa6.03□□□□□ -1.44
SPSB3-201ENST00000301717 KRTAP15-1Q3LI76 137 aa6.01□□□□□ -1.45
SPSB3-201ENST00000301717 KRTAP5-4Q6L8H1 288 aa5.99□□□□□ -1.45
SPSB3-201ENST00000301717 HMCN1Q96RW7 5635 aa5.98□□□□□ -1.45
SPSB3-201ENST00000301717 LOC100996750A0A140TA64 210 aa5.94□□□□□ -1.46
SPSB3-201ENST00000301717 KRTAP4-6Q9BYQ5 205 aa5.91□□□□□ -1.46
SPSB3-201ENST00000301717 LCE3CQ5T5A8 94 aa5.9□□□□□ -1.47
SPSB3-201ENST00000301717 GPR98Q8WXG9 6306 aa5.89□□□□□ -1.47
SPSB3-201ENST00000301717 KRTAP5-5Q701N2 237 aaPredicted RBP5.87□□□□□ -1.47
SPSB3-201ENST00000301717 KRTAP19-4Q3LI73 84 aa5.84□□□□□ -1.47
SPSB3-201ENST00000301717 AHNAK2Q8IVF2 5795 aa5.69□□□□□ -1.5
SPSB3-201ENST00000301717 SYNE1Q8NF91 8797 aaKnown RBP5.68□□□□□ -1.5
SPSB3-201ENST00000301717 KRTAP20-2Q3LI61 65 aa5.67□□□□□ -1.5
SPSB3-201ENST00000301717 KRTAP9-6A8MVA2 160 aa5.64□□□□□ -1.51
SPSB3-201ENST00000301717 KRTAP12-4P60329 112 aa5.62□□□□□ -1.51
SPSB3-201ENST00000301717 SPRR5A0A1B0GTR4 108 aa5.59□□□□□ -1.51
SPSB3-201ENST00000301717 NDUFAF8A1L188 74 aa5.55□□□□□ -1.52
SPSB3-201ENST00000301717 LUZP6Q538Z0 58 aa5.54□□□□□ -1.52
SPSB3-201ENST00000301717 KRTAP6-1Q3LI64 71 aa5.52□□□□□ -1.53
SPSB3-201ENST00000301717 MT1AP04731 61 aa5.51□□□□□ -1.53
SPSB3-201ENST00000301717 KRTAP5-10Q6L8G5 202 aa5.5□□□□□ -1.53
SPSB3-201ENST00000301717 KRTAP5-3Q6L8H2 238 aa5.49□□□□□ -1.53
SPSB3-201ENST00000301717 H3BS24 57 aa5.41□□□□□ -1.54
SPSB3-201ENST00000301717 KRTAP9-4Q9BYQ2 154 aa5.31□□□□□ -1.56
SPSB3-201ENST00000301717 KRTAP5-2Q701N4 177 aa5.29□□□□□ -1.56
SPSB3-201ENST00000301717 KRTAP6-2Q3LI66 62 aa5.23□□□□□ -1.57
SPSB3-201ENST00000301717 KRTAP5-7Q6L8G8 165 aa5.23□□□□□ -1.57
SPSB3-201ENST00000301717 KRTAP4-11Q9BYQ6 195 aa5.11□□□□□ -1.59
SPSB3-201ENST00000301717 A0A0A0MQY5 61 aa5.05□□□□□ -1.6
SPSB3-201ENST00000301717 OBSCNQ5VST9 7968 aa5.03□□□□□ -1.6
SPSB3-201ENST00000301717 MT3P25713 68 aa5.01□□□□□ -1.61
SPSB3-201ENST00000301717 KRTAP5-8O75690 187 aa4.95□□□□□ -1.62
SPSB3-201ENST00000301717 KRTAP5-1Q6L8H4 278 aa4.72□□□□□ -1.65
SPSB3-201ENST00000301717 MUC5ACP98088 5654 aa4.69□□□□□ -1.66
SPSB3-201ENST00000301717 MUC5BQ9HC84 5762 aaPredicted RBP4.66□□□□□ -1.66
SPSB3-201ENST00000301717 INE1O15225 51 aa4.62□□□□□ -1.67
SPSB3-201ENST00000301717 KRTAP9-9Q9BYP9 154 aa4.62□□□□□ -1.67
SPSB3-201ENST00000301717 AHNAKQ09666 5890 aaKnown RBP4.61□□□□□ -1.67
SPSB3-201ENST00000301717 LCE1EQ5T753 118 aa4.52□□□□□ -1.69
SPSB3-201ENST00000301717 LCE1BQ5T7P3 118 aa4.35□□□□□ -1.71
SPSB3-201ENST00000301717 KRTAP4-2Q9BYR5 136 aa4.33□□□□□ -1.72
SPSB3-201ENST00000301717 LCE3DQ9BYE3 92 aa4.27□□□□□ -1.73
SPSB3-201ENST00000301717 LCE1CQ5T751 118 aa4.21□□□□□ -1.74
SPSB3-201ENST00000301717 LCE3EQ5T5B0 92 aa4.04□□□□□ -1.76
SPSB3-201ENST00000301717 KRTAP4-12Q9BQ66 201 aa3.92□□□□□ -1.78
SPSB3-201ENST00000301717 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.85□□□□□ -1.79
SPSB3-201ENST00000301717 KRTAP5-11Q6L8G4 156 aa3.8□□□□□ -1.8
SPSB3-201ENST00000301717 KRTAP21-2Q3LI59 83 aa3.61□□□□□ -1.83
SPSB3-201ENST00000301717 LCE1FQ5T754 118 aa3.6□□□□□ -1.83
SPSB3-201ENST00000301717 PRM1P04553 51 aa3.47□□□□□ -1.85
SPSB3-201ENST00000301717 KRTAP4-4Q9BYR3 166 aa3.36□□□□□ -1.87
SPSB3-201ENST00000301717 PHGR1C9JFL3 82 aa3.29□□□□□ -1.88
SPSB3-201ENST00000301717 MUC19Q7Z5P9 8384 aa3.09□□□□□ -1.92
SPSB3-201ENST00000301717 KRTAP21-1Q3LI58 79 aa2.38□□□□□ -2.03
SPSB3-201ENST00000301717 MUC16Q8WXI7 14507 aa2.09□□□□□ -2.07
Retrieved 77 of 20,778 RNA–protein pairs in 8.7 ms