RNA–Protein interactions for RNA: ENST00000298552.7

TSC1-201, Transcript of TSC complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSC1, Length 8,604 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-201ENST00000298552 KRTAP19-2Q3LHN2 52 aa2.07□□□□□ -2.08
TSC1-201ENST00000298552 KRTAP9-2Q9BYQ4 174 aa2.06□□□□□ -2.08
TSC1-201ENST00000298552 KRTAP9-9Q9BYP9 154 aa2.05□□□□□ -2.08
TSC1-201ENST00000298552 KRTAP2-3P0C7H8 128 aa2.04□□□□□ -2.08
TSC1-201ENST00000298552 KRTAP2-4Q9BYR9 128 aa2.04□□□□□ -2.08
TSC1-201ENST00000298552 KRTAP2-1Q9BYU5 128 aa2.04□□□□□ -2.08
TSC1-201ENST00000298552 KRTAP4-7Q9BYR0 210 aa2.03□□□□□ -2.08
TSC1-201ENST00000298552 HYDINQ4G0P3 5121 aa1.98□□□□□ -2.09
TSC1-201ENST00000298552 KIAA1109Q2LD37 5005 aa1.95□□□□□ -2.1
TSC1-201ENST00000298552 KRTAP6-2Q3LI66 62 aa1.95□□□□□ -2.1
TSC1-201ENST00000298552 KRTAP9-6A0A140TA67 174 aa1.95□□□□□ -2.1
TSC1-201ENST00000298552 LOC100996750A0A140TA64 210 aa1.94□□□□□ -2.1
TSC1-201ENST00000298552 PCLOQ9Y6V0 5065 aa1.94□□□□□ -2.1
TSC1-201ENST00000298552 LCE2AQ5TA79 106 aaPredicted RBP1.94□□□□□ -2.1
TSC1-201ENST00000298552 MUC17Q685J3 4493 aa1.93□□□□□ -2.1
TSC1-201ENST00000298552 KRTAP19-7Q3SYF9 63 aa1.92□□□□□ -2.1
TSC1-201ENST00000298552 KRTAP4-3Q9BYR4 195 aa1.92□□□□□ -2.1
TSC1-201ENST00000298552 KRTAP2-2Q9BYT5 123 aa1.91□□□□□ -2.1
TSC1-201ENST00000298552 KRTAP9-7A8MTY7 169 aa1.91□□□□□ -2.1
TSC1-201ENST00000298552 HERC2O95714 4834 aa1.91□□□□□ -2.1
TSC1-201ENST00000298552 KMT2CQ8NEZ4 4911 aaKnown RBP1.9□□□□□ -2.1
TSC1-201ENST00000298552 KRTAP9-4Q9BYQ2 154 aa1.9□□□□□ -2.11
TSC1-201ENST00000298552 KRTAP6-3Q3LI67 103 aa1.88□□□□□ -2.11
TSC1-201ENST00000298552 BIRC6Q9NR09 4857 aa1.85□□□□□ -2.11
TSC1-201ENST00000298552 HERC1Q15751 4861 aa1.8□□□□□ -2.12
TSC1-201ENST00000298552 KRTAP4-9Q9BYQ8 210 aa1.79□□□□□ -2.12
TSC1-201ENST00000298552 HMCN2Q8NDA2 5059 aa1.79□□□□□ -2.12
TSC1-201ENST00000298552 ABCA13Q86UQ4 5058 aa1.78□□□□□ -2.12
TSC1-201ENST00000298552 SYNE2Q8WXH0 6885 aaKnown RBP1.77□□□□□ -2.13
TSC1-201ENST00000298552 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.77□□□□□ -2.13
TSC1-201ENST00000298552 KRTAP6-1Q3LI64 71 aa1.76□□□□□ -2.13
TSC1-201ENST00000298552 SYNE1Q8NF91 8797 aaKnown RBP1.74□□□□□ -2.13
TSC1-201ENST00000298552 EPPK1P58107 5090 aaKnown RBP1.74□□□□□ -2.13
TSC1-201ENST00000298552 RNF213Q63HN8 5207 aa1.73□□□□□ -2.13
TSC1-201ENST00000298552 KRTAP9-6A8MVA2 160 aa1.71□□□□□ -2.14
TSC1-201ENST00000298552 OBSCNQ5VST9 7968 aa1.7□□□□□ -2.14
TSC1-201ENST00000298552 KRTAP20-2Q3LI61 65 aa1.68□□□□□ -2.14
TSC1-201ENST00000298552 FSIP2Q5CZC0 6907 aa1.64□□□□□ -2.15
TSC1-201ENST00000298552 UBR4Q5T4S7 5183 aa1.62□□□□□ -2.15
TSC1-201ENST00000298552 FAT4Q6V0I7 4981 aa1.62□□□□□ -2.15
TSC1-201ENST00000298552 MUC2Q02817 5179 aa1.59□□□□□ -2.16
TSC1-201ENST00000298552 KRTAP4-11Q9BYQ6 195 aa1.58□□□□□ -2.16
TSC1-201ENST00000298552 KRTAP5-9P26371 169 aa1.55□□□□□ -2.16
TSC1-201ENST00000298552 MACF1Q9UPN3 7388 aaKnown RBP1.49□□□□□ -2.17
TSC1-201ENST00000298552 USH2AO75445 5202 aa1.47□□□□□ -2.17
TSC1-201ENST00000298552 KRTAP4-6Q9BYQ5 205 aa1.46□□□□□ -2.18
TSC1-201ENST00000298552 DSTQ03001 7570 aaKnown RBP1.43□□□□□ -2.18
TSC1-201ENST00000298552 MUC19Q7Z5P9 8384 aa1.42□□□□□ -2.18
TSC1-201ENST00000298552 NEBP20929 6669 aa1.42□□□□□ -2.18
TSC1-201ENST00000298552 KRTAP5-5Q701N2 237 aaPredicted RBP1.42□□□□□ -2.18
TSC1-201ENST00000298552 SSPOA2VEC9 5147 aa1.41□□□□□ -2.18
TSC1-201ENST00000298552 KRTAP4-12Q9BQ66 201 aa1.4□□□□□ -2.18
TSC1-201ENST00000298552 KRTAP4-2Q9BYR5 136 aa1.4□□□□□ -2.18
TSC1-201ENST00000298552 KRTAP5-4Q6L8H1 288 aa1.4□□□□□ -2.19
TSC1-201ENST00000298552 KMT2DO14686 5537 aa1.4□□□□□ -2.19
TSC1-201ENST00000298552 KRTAP4-4Q9BYR3 166 aa1.39□□□□□ -2.19
TSC1-201ENST00000298552 FCGBPQ9Y6R7 5405 aaPredicted RBP1.39□□□□□ -2.19
TSC1-201ENST00000298552 MDN1Q9NU22 5596 aa1.36□□□□□ -2.19
TSC1-201ENST00000298552 MUC5ACP98088 5654 aa1.29□□□□□ -2.2
TSC1-201ENST00000298552 GPR98Q8WXG9 6306 aa1.28□□□□□ -2.21
TSC1-201ENST00000298552 PHGR1C9JFL3 82 aa1.24□□□□□ -2.21
TSC1-201ENST00000298552 KRTAP5-3Q6L8H2 238 aa1.21□□□□□ -2.22
TSC1-201ENST00000298552 MUC12Q9UKN1 5478 aa1.21□□□□□ -2.22
TSC1-201ENST00000298552 HMCN1Q96RW7 5635 aa1.2□□□□□ -2.22
TSC1-201ENST00000298552 KRTAP5-2Q701N4 177 aa1.15□□□□□ -2.22
TSC1-201ENST00000298552 AHNAK2Q8IVF2 5795 aa1.13□□□□□ -2.23
TSC1-201ENST00000298552 MUC5BQ9HC84 5762 aaPredicted RBP1.12□□□□□ -2.23
TSC1-201ENST00000298552 AHNAKQ09666 5890 aaKnown RBP1.09□□□□□ -2.23
TSC1-201ENST00000298552 KRTAP5-8O75690 187 aa1.07□□□□□ -2.24
TSC1-201ENST00000298552 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.07□□□□□ -2.24
TSC1-201ENST00000298552 KRTAP21-1Q3LI58 79 aa1.06□□□□□ -2.24
TSC1-201ENST00000298552 KRTAP5-10Q6L8G5 202 aa1.04□□□□□ -2.24
TSC1-201ENST00000298552 KRTAP5-1Q6L8H4 278 aa1.01□□□□□ -2.25
TSC1-201ENST00000298552 MUC16Q8WXI7 14507 aa0.99□□□□□ -2.25
TSC1-201ENST00000298552 KRTAP5-11Q6L8G4 156 aa0.98□□□□□ -2.25
TSC1-201ENST00000298552 KRTAP5-7Q6L8G8 165 aa0.98□□□□□ -2.25
TSC1-201ENST00000298552 KRTAP21-2Q3LI59 83 aa0.94□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 90 ms